Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3□□□□□ -1.93
UPK1AO00322 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3□□□□□ -1.93
UPK1AO00322 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3□□□□□ -1.93
UPK1AO00322 RPL6P5-201ENST00000445678 828 ntBASIC3□□□□□ -1.93
UPK1AO00322 VN1R34P-201ENST00000447387 883 ntBASIC3□□□□□ -1.93
UPK1AO00322 RPS20P32-201ENST00000456044 356 ntBASIC3□□□□□ -1.93
UPK1AO00322 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3□□□□□ -1.93
UPK1AO00322 RPL7L1P13-201ENST00000511702 739 ntBASIC3□□□□□ -1.93
UPK1AO00322 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3□□□□□ -1.93
UPK1AO00322 SNORA26.10-201ENST00000516427 141 ntBASIC3□□□□□ -1.93
UPK1AO00322 RN7SKP283-201ENST00000517197 270 ntBASIC3□□□□□ -1.93
UPK1AO00322 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3□□□□□ -1.93
UPK1AO00322 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3□□□□□ -1.93
UPK1AO00322 OR5D17P-201ENST00000531492 978 ntBASIC3□□□□□ -1.93
UPK1AO00322 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3□□□□□ -1.93
UPK1AO00322 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3□□□□□ -1.93
UPK1AO00322 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3□□□□□ -1.93
UPK1AO00322 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3□□□□□ -1.93
UPK1AO00322 MIR4429-201ENST00000580105 73 ntBASIC3□□□□□ -1.93
UPK1AO00322 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3□□□□□ -1.93
UPK1AO00322 AC008739.3-201ENST00000603262 127 ntBASIC3□□□□□ -1.93
UPK1AO00322 AC019176.2-201ENST00000611579 315 ntBASIC3□□□□□ -1.93
UPK1AO00322 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
UPK1AO00322 AC138649.5-201ENST00000637456 137 ntBASIC3□□□□□ -1.93
UPK1AO00322 OR8B1P-202ENST00000641132 1178 ntBASIC3□□□□□ -1.93
UPK1AO00322 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3□□□□□ -1.93
UPK1AO00322 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
UPK1AO00322 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
UPK1AO00322 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
UPK1AO00322 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
UPK1AO00322 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
UPK1AO00322 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
UPK1AO00322 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
UPK1AO00322 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
UPK1AO00322 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
UPK1AO00322 RNU2-37P-201ENST00000410695 177 ntBASIC2.99□□□□□ -1.93
UPK1AO00322 RNU2-6P-201ENST00000411404 190 ntBASIC2.99□□□□□ -1.93
UPK1AO00322 RPS3AP25-201ENST00000411660 793 ntBASIC2.99□□□□□ -1.93
UPK1AO00322 NUP35P2-201ENST00000416748 943 ntBASIC2.99□□□□□ -1.93
UPK1AO00322 SDCBPP3-201ENST00000419629 891 ntBASIC2.99□□□□□ -1.93
UPK1AO00322 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.99□□□□□ -1.93
UPK1AO00322 AC005300.1-201ENST00000428401 373 ntBASIC2.99□□□□□ -1.93
UPK1AO00322 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
UPK1AO00322 AC244505.4-201ENST00000434905 287 ntBASIC2.99□□□□□ -1.93
UPK1AO00322 SSXP5-201ENST00000443473 287 ntBASIC2.99□□□□□ -1.93
UPK1AO00322 AC044797.1-201ENST00000445744 679 ntBASIC2.99□□□□□ -1.93
UPK1AO00322 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.99□□□□□ -1.93
UPK1AO00322 AC091153.1-201ENST00000466297 402 ntBASIC2.99□□□□□ -1.93
UPK1AO00322 RPL21P18-201ENST00000469899 480 ntBASIC2.99□□□□□ -1.93
UPK1AO00322 RPL21P129-201ENST00000491732 478 ntBASIC2.99□□□□□ -1.93
UPK1AO00322 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC2.99□□□□□ -1.93
UPK1AO00322 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.99□□□□□ -1.93
UPK1AO00322 MTCO1P30-201ENST00000515244 580 ntBASIC2.99□□□□□ -1.93
UPK1AO00322 AC004923.2-201ENST00000529649 369 ntBASIC2.99□□□□□ -1.93
UPK1AO00322 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.99□□□□□ -1.93
UPK1AO00322 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.99□□□□□ -1.93
UPK1AO00322 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.99□□□□□ -1.93
UPK1AO00322 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.99□□□□□ -1.93
UPK1AO00322 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.99□□□□□ -1.93
UPK1AO00322 RNA5SP108-201ENST00000605921 117 ntBASIC2.99□□□□□ -1.93
UPK1AO00322 AC112503.1-201ENST00000608436 391 ntBASIC2.99□□□□□ -1.93
UPK1AO00322 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.99□□□□□ -1.93
UPK1AO00322 MIR4496-201ENST00000635896 61 ntBASIC2.99□□□□□ -1.93
UPK1AO00322 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC2.99□□□□□ -1.93
UPK1AO00322 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.99□□□□□ -1.93
UPK1AO00322 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
UPK1AO00322 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.99□□□□□ -1.93
UPK1AO00322 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
UPK1AO00322 AC119744.1-201ENST00000454746 1715 ntBASIC2.99□□□□□ -1.93
UPK1AO00322 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
UPK1AO00322 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC2.98□□□□□ -1.93
UPK1AO00322 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
UPK1AO00322 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
UPK1AO00322 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
UPK1AO00322 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
UPK1AO00322 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
UPK1AO00322 RPL23AP57-201ENST00000332361 466 ntBASIC2.98□□□□□ -1.93
UPK1AO00322 SNORD115-48-201ENST00000364764 76 ntBASIC2.98□□□□□ -1.93
UPK1AO00322 MIR670-201ENST00000390142 98 ntBASIC2.98□□□□□ -1.93
UPK1AO00322 SNORA48.8-201ENST00000391324 134 ntBASIC2.98□□□□□ -1.93
UPK1AO00322 HMGB1P10-201ENST00000395823 563 ntBASIC2.98□□□□□ -1.93
UPK1AO00322 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.98□□□□□ -1.93
UPK1AO00322 AL357075.1-201ENST00000404107 726 ntBASIC2.98□□□□□ -1.93
UPK1AO00322 RNU2-17P-201ENST00000410290 190 ntBASIC2.98□□□□□ -1.93
UPK1AO00322 RPS15AP40-201ENST00000419621 391 ntBASIC2.98□□□□□ -1.93
UPK1AO00322 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC2.98□□□□□ -1.93
UPK1AO00322 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC2.98□□□□□ -1.93
UPK1AO00322 MTND4LP14-201ENST00000429447 288 ntBASIC2.98□□□□□ -1.93
UPK1AO00322 PSMA2P3-201ENST00000429685 675 ntBASIC2.98□□□□□ -1.93
UPK1AO00322 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.98□□□□□ -1.93
UPK1AO00322 ELOCP23-201ENST00000452014 332 ntBASIC2.98□□□□□ -1.93
UPK1AO00322 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC2.98□□□□□ -1.93
UPK1AO00322 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC2.98□□□□□ -1.93
UPK1AO00322 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC2.98□□□□□ -1.93
UPK1AO00322 WBP1LP4-201ENST00000505043 344 ntBASIC2.98□□□□□ -1.93
UPK1AO00322 AC110794.1-201ENST00000505816 425 ntBASIC2.98□□□□□ -1.93
UPK1AO00322 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.98□□□□□ -1.93
UPK1AO00322 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.98□□□□□ -1.93
UPK1AO00322 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.98□□□□□ -1.93
UPK1AO00322 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms