Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC016397.1-201ENST00000412463 242 ntBASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 AL133384.1-201ENST00000412744 351 ntBASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 RPS6P14-201ENST00000425165 719 ntBASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 AL691449.1-201ENST00000426570 421 ntBASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 AL035410.1-201ENST00000427409 427 ntBASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 DNAJC19P7-201ENST00000428811 344 ntBASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 CNOT7P1-201ENST00000429006 852 ntBASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 MRPL50P1-201ENST00000431951 384 ntBASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 VDAC1P3-201ENST00000434069 851 ntBASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 SNORA71B-202ENST00000439232 272 ntBASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 RPL23AP16-201ENST00000441715 421 ntBASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 NPM1P13-201ENST00000452663 865 ntBASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 RPS23P7-201ENST00000466210 444 ntBASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 RPL7P5-201ENST00000471472 736 ntBASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 UQCRHP4-201ENST00000471686 272 ntBASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 AC110792.1-201ENST00000491826 472 ntBASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 RPS4XP14-201ENST00000493072 781 ntBASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 NAMPTP2-201ENST00000505629 1115 ntBASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 AC093840.1-201ENST00000511599 336 ntBASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 MTCO1P49-201ENST00000523429 802 ntBASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 AC109635.4-202ENST00000531666 412 ntBASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 CYB5AP5-201ENST00000549779 389 ntBASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 AC068831.4-201ENST00000556118 109 ntBASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 AC093519.1-201ENST00000566109 298 ntBASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 AC012182.1-201ENST00000570133 895 ntBASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 KPNA2P3-201ENST00000584190 848 ntBASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 DPRXP5-201ENST00000604662 539 ntBASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 AC090425.2-201ENST00000608818 501 ntBASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 AP005137.2-201ENST00000609238 400 ntBASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 AC073968.1-201ENST00000618594 637 ntBASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 AC006963.1-201ENST00000624003 1052 ntBASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 AL512506.2-201ENST00000624472 458 ntBASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
KCNIP3Q9Y2W7 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
KCNIP3Q9Y2W7 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
KCNIP3Q9Y2W7 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.09□□□□□ -1.92
KCNIP3Q9Y2W7 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
KCNIP3Q9Y2W7 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
KCNIP3Q9Y2W7 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.09□□□□□ -1.92
KCNIP3Q9Y2W7 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 RNVU1-3-201ENST00000364313 161 ntBASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 RNA5SP509-201ENST00000364577 119 ntBASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 DYNLT3P1-201ENST00000378574 347 ntBASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 MIR217-201ENST00000384817 110 ntBASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 MCTS2P-201ENST00000394552 546 ntBASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 AL133270.1-201ENST00000402635 279 ntBASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 MTCYBP32-201ENST00000427945 1084 ntBASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 HMGN2P16-201ENST00000456802 261 ntBASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 AC011276.1-201ENST00000469688 323 ntBASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 TSACC-207ENST00000470342 601 ntTSL 2 BASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 AC074386.1-201ENST00000476560 767 ntBASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 RN7SL177P-201ENST00000476596 299 ntBASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 AC015908.1-201ENST00000478739 476 ntBASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 RPS4XP13-201ENST00000483219 789 ntBASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 AC091167.1-201ENST00000492017 396 ntBASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 AC093720.1-201ENST00000505681 714 ntBASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 HMGB3P15-201ENST00000507326 574 ntBASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 RAC1P2-201ENST00000511164 579 ntBASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 RNU2-27P-201ENST00000516185 142 ntBASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 RNU6-1073P-201ENST00000517182 106 ntBASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 AC006518.1-201ENST00000541449 943 ntBASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 SULT1C2P1-202ENST00000562418 459 ntBASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 AP001542.2-201ENST00000593141 364 ntBASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 BNIP3P38-201ENST00000601117 544 ntBASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 GAS5-AS1-201ENST00000602767 694 ntBASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 BNIP3P19-201ENST00000605397 577 ntBASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 AC211433.2-201ENST00000608433 387 ntBASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 AC006023.2-201ENST00000609916 167 ntBASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 AL590282.1-201ENST00000610379 1136 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms