Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 U3.25-201ENST00000391209 220 ntBASIC6.56□□□□□ -1.36
LIMD1Q9UGP4 RPS15AP40-201ENST00000419621 391 ntBASIC6.56□□□□□ -1.36
LIMD1Q9UGP4 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC6.56□□□□□ -1.36
LIMD1Q9UGP4 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC6.56□□□□□ -1.36
LIMD1Q9UGP4 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.56□□□□□ -1.36
LIMD1Q9UGP4 AC010655.1-201ENST00000449336 292 ntBASIC6.56□□□□□ -1.36
LIMD1Q9UGP4 RPS26P39-201ENST00000469206 341 ntBASIC6.56□□□□□ -1.36
LIMD1Q9UGP4 DEFB109F-201ENST00000491870 277 ntBASIC6.56□□□□□ -1.36
LIMD1Q9UGP4 AC104564.1-201ENST00000493028 407 ntBASIC6.56□□□□□ -1.36
LIMD1Q9UGP4 MTND6P8-201ENST00000503471 522 ntBASIC6.56□□□□□ -1.36
LIMD1Q9UGP4 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.56□□□□□ -1.36
LIMD1Q9UGP4 AC087854.1-201ENST00000519706 414 ntBASIC6.56□□□□□ -1.36
LIMD1Q9UGP4 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.56□□□□□ -1.36
LIMD1Q9UGP4 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.56□□□□□ -1.36
LIMD1Q9UGP4 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.56□□□□□ -1.36
LIMD1Q9UGP4 AC110743.1-201ENST00000584870 478 ntBASIC6.56□□□□□ -1.36
LIMD1Q9UGP4 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.56□□□□□ -1.36
LIMD1Q9UGP4 AP001823.1-201ENST00000604056 1003 ntBASIC6.56□□□□□ -1.36
LIMD1Q9UGP4 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC6.56□□□□□ -1.36
LIMD1Q9UGP4 AC073488.3-201ENST00000631611 778 ntBASIC6.56□□□□□ -1.36
LIMD1Q9UGP4 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
LIMD1Q9UGP4 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
LIMD1Q9UGP4 CUBNP3-201ENST00000457461 1784 ntBASIC6.56□□□□□ -1.36
LIMD1Q9UGP4 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
LIMD1Q9UGP4 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
LIMD1Q9UGP4 AC008627.1-201ENST00000517511 1704 ntBASIC6.56□□□□□ -1.36
LIMD1Q9UGP4 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
LIMD1Q9UGP4 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.56□□□□□ -1.36
LIMD1Q9UGP4 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 SNORA21-201ENST00000362423 132 ntBASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 SNORA16.2-201ENST00000390991 127 ntBASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 RNU6-1109P-201ENST00000391187 107 ntBASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 RN7SKP279-201ENST00000411383 298 ntBASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 RNU6-603P-201ENST00000411403 107 ntBASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 Z99755.1-201ENST00000414048 380 ntBASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 AC093106.2-201ENST00000428212 385 ntBASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 RPS24P13-201ENST00000442520 397 ntBASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 AP006222.1-205ENST00000450734 457 ntBASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 RPS20P21-201ENST00000466859 343 ntBASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 AC104472.2-201ENST00000469035 601 ntBASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 RN7SL326P-201ENST00000477493 296 ntBASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 TBCAP3-201ENST00000512475 312 ntBASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 RNU6-1332P-201ENST00000516666 104 ntBASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 AC103783.1-201ENST00000520506 373 ntBASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 DYNLL1P4-201ENST00000549314 266 ntBASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 AC091078.2-201ENST00000557145 559 ntBASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 AC007225.2-201ENST00000562529 256 ntBASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 MIR3176-201ENST00000582210 90 ntBASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 AC067852.5-201ENST00000589299 310 ntBASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 AC174048.1-201ENST00000603389 144 ntBASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 AC020634.1-201ENST00000608701 549 ntBASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 AL352984.2-201ENST00000611153 546 ntBASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 ST7-212ENST00000422922 1887 ntTSL 5 BASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 BIN2P1-201ENST00000504996 1530 ntBASIC6.55□□□□□ -1.36
LIMD1Q9UGP4 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
LIMD1Q9UGP4 AC074141.1-201ENST00000588129 2995 ntBASIC6.54□□□□□ -1.36
LIMD1Q9UGP4 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.54□□□□□ -1.36
LIMD1Q9UGP4 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
LIMD1Q9UGP4 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LIMD1Q9UGP4 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
LIMD1Q9UGP4 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.54□□□□□ -1.36
LIMD1Q9UGP4 Y_RNA.380-201ENST00000365663 111 ntBASIC6.54□□□□□ -1.36
LIMD1Q9UGP4 Y_RNA.645-201ENST00000391229 102 ntBASIC6.54□□□□□ -1.36
LIMD1Q9UGP4 UBE2V1P14-201ENST00000415815 558 ntBASIC6.54□□□□□ -1.36
LIMD1Q9UGP4 UBE2FP1-201ENST00000416536 447 ntBASIC6.54□□□□□ -1.36
LIMD1Q9UGP4 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.54□□□□□ -1.36
LIMD1Q9UGP4 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC6.54□□□□□ -1.36
LIMD1Q9UGP4 AL353597.2-202ENST00000434901 373 ntBASIC6.54□□□□□ -1.36
LIMD1Q9UGP4 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.54□□□□□ -1.36
LIMD1Q9UGP4 HIGD1AP11-201ENST00000438361 280 ntBASIC6.54□□□□□ -1.36
LIMD1Q9UGP4 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC6.54□□□□□ -1.36
LIMD1Q9UGP4 HMGB3P30-201ENST00000457863 606 ntBASIC6.54□□□□□ -1.36
LIMD1Q9UGP4 SNORD5.1-201ENST00000458800 75 ntBASIC6.54□□□□□ -1.36
LIMD1Q9UGP4 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.54□□□□□ -1.36
LIMD1Q9UGP4 AC103987.1-201ENST00000473394 348 ntBASIC6.54□□□□□ -1.36
LIMD1Q9UGP4 AL136038.1-201ENST00000497246 351 ntBASIC6.54□□□□□ -1.36
LIMD1Q9UGP4 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC6.54□□□□□ -1.36
LIMD1Q9UGP4 IL7R-208ENST00000511982 612 ntTSL 2 BASIC6.54□□□□□ -1.36
LIMD1Q9UGP4 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
LIMD1Q9UGP4 IGKV2-19-201ENST00000518132 283 ntBASIC6.54□□□□□ -1.36
LIMD1Q9UGP4 RNU6-323P-201ENST00000521915 107 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms