Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC010329.2-201ENST00000595195 2737 ntBASIC3.91□□□□□ -1.78
SIX2Q9NPC8 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SIX2Q9NPC8 AC022031.1-201ENST00000585985 2593 ntBASIC3.9□□□□□ -1.78
SIX2Q9NPC8 OR5H2-201ENST00000355273 945 ntBASIC3.9□□□□□ -1.79
SIX2Q9NPC8 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
SIX2Q9NPC8 SNORD116-8-201ENST00000384365 95 ntBASIC3.9□□□□□ -1.79
SIX2Q9NPC8 SNORA51.12-201ENST00000384448 134 ntBASIC3.9□□□□□ -1.79
SIX2Q9NPC8 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.9□□□□□ -1.79
SIX2Q9NPC8 GSTA8P-201ENST00000404253 637 ntBASIC3.9□□□□□ -1.79
SIX2Q9NPC8 RAB28P1-201ENST00000411517 641 ntBASIC3.9□□□□□ -1.79
SIX2Q9NPC8 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.9□□□□□ -1.79
SIX2Q9NPC8 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.9□□□□□ -1.79
SIX2Q9NPC8 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.9□□□□□ -1.79
SIX2Q9NPC8 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.9□□□□□ -1.79
SIX2Q9NPC8 RPL23AP76-201ENST00000441860 458 ntBASIC3.9□□□□□ -1.79
SIX2Q9NPC8 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.9□□□□□ -1.79
SIX2Q9NPC8 FCF1P3-201ENST00000496394 590 ntBASIC3.9□□□□□ -1.79
SIX2Q9NPC8 DYNLL1P6-201ENST00000503440 264 ntBASIC3.9□□□□□ -1.79
SIX2Q9NPC8 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
SIX2Q9NPC8 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.9□□□□□ -1.79
SIX2Q9NPC8 NPM1P41-201ENST00000512920 831 ntBASIC3.9□□□□□ -1.79
SIX2Q9NPC8 AC008837.2-201ENST00000513076 418 ntBASIC3.9□□□□□ -1.79
SIX2Q9NPC8 AC008494.2-201ENST00000514544 370 ntBASIC3.9□□□□□ -1.79
SIX2Q9NPC8 RNU6-579P-201ENST00000516879 102 ntBASIC3.9□□□□□ -1.79
SIX2Q9NPC8 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.9□□□□□ -1.79
SIX2Q9NPC8 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.9□□□□□ -1.79
SIX2Q9NPC8 IGLVIV-53-201ENST00000520107 367 ntBASIC3.9□□□□□ -1.79
SIX2Q9NPC8 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.9□□□□□ -1.79
SIX2Q9NPC8 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.9□□□□□ -1.79
SIX2Q9NPC8 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.9□□□□□ -1.79
SIX2Q9NPC8 MTND2P26-201ENST00000528255 1029 ntBASIC3.9□□□□□ -1.79
SIX2Q9NPC8 PDCL2P2-201ENST00000533651 189 ntBASIC3.9□□□□□ -1.79
SIX2Q9NPC8 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.9□□□□□ -1.79
SIX2Q9NPC8 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.9□□□□□ -1.79
SIX2Q9NPC8 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.9□□□□□ -1.79
SIX2Q9NPC8 AC091515.1-201ENST00000548110 679 ntBASIC3.9□□□□□ -1.79
SIX2Q9NPC8 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.9□□□□□ -1.79
SIX2Q9NPC8 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.9□□□□□ -1.79
SIX2Q9NPC8 AC087465.1-201ENST00000560574 245 ntBASIC3.9□□□□□ -1.79
SIX2Q9NPC8 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SIX2Q9NPC8 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.9□□□□□ -1.79
SIX2Q9NPC8 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.9□□□□□ -1.79
SIX2Q9NPC8 AC115621.1-201ENST00000604653 858 ntBASIC3.9□□□□□ -1.79
SIX2Q9NPC8 DPRXP5-201ENST00000604662 539 ntBASIC3.9□□□□□ -1.79
SIX2Q9NPC8 AC006077.1-201ENST00000604746 343 ntBASIC3.9□□□□□ -1.79
SIX2Q9NPC8 AC080013.3-201ENST00000606839 578 ntBASIC3.9□□□□□ -1.79
SIX2Q9NPC8 AL450489.1-201ENST00000612071 468 ntBASIC3.9□□□□□ -1.79
SIX2Q9NPC8 AC093783.1-201ENST00000612976 329 ntBASIC3.9□□□□□ -1.79
SIX2Q9NPC8 AC023158.2-201ENST00000614876 543 ntBASIC3.9□□□□□ -1.79
SIX2Q9NPC8 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.9□□□□□ -1.79
SIX2Q9NPC8 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
SIX2Q9NPC8 AC022509.4-201ENST00000621404 572 ntBASIC3.9□□□□□ -1.79
SIX2Q9NPC8 AC131159.1-201ENST00000621854 213 ntBASIC3.9□□□□□ -1.79
SIX2Q9NPC8 AC078883.4-201ENST00000623218 367 ntBASIC3.9□□□□□ -1.79
SIX2Q9NPC8 AC116563.2-201ENST00000624751 535 ntBASIC3.9□□□□□ -1.79
SIX2Q9NPC8 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.9□□□□□ -1.79
SIX2Q9NPC8 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.9□□□□□ -1.79
SIX2Q9NPC8 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
SIX2Q9NPC8 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
SIX2Q9NPC8 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SIX2Q9NPC8 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 RNA5SP51-201ENST00000364750 119 ntBASIC3.89□□□□□ -1.79
SIX2Q9NPC8 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 SNORD116-2-201ENST00000384274 95 ntBASIC3.89□□□□□ -1.79
SIX2Q9NPC8 SNORD116-6-201ENST00000384711 96 ntBASIC3.89□□□□□ -1.79
SIX2Q9NPC8 SNORD65.1-201ENST00000390889 71 ntBASIC3.89□□□□□ -1.79
SIX2Q9NPC8 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 AC234782.4-201ENST00000417646 1048 ntBASIC3.89□□□□□ -1.79
SIX2Q9NPC8 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 GTF2IP23-201ENST00000423746 351 ntBASIC3.89□□□□□ -1.79
SIX2Q9NPC8 DPRXP1-201ENST00000426312 460 ntBASIC3.89□□□□□ -1.79
SIX2Q9NPC8 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.89□□□□□ -1.79
SIX2Q9NPC8 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 MTND1P32-201ENST00000433043 938 ntBASIC3.89□□□□□ -1.79
SIX2Q9NPC8 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 PPIAP17-201ENST00000438507 471 ntBASIC3.89□□□□□ -1.79
SIX2Q9NPC8 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 ART2BP-201ENST00000453501 499 ntBASIC3.89□□□□□ -1.79
SIX2Q9NPC8 ANKRD26P4-201ENST00000455755 950 ntBASIC3.89□□□□□ -1.79
SIX2Q9NPC8 ATG12P2-201ENST00000456830 416 ntBASIC3.89□□□□□ -1.79
SIX2Q9NPC8 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 VPS26AP1-201ENST00000483197 979 ntBASIC3.89□□□□□ -1.79
SIX2Q9NPC8 RPS3AP22-201ENST00000488297 769 ntBASIC3.89□□□□□ -1.79
SIX2Q9NPC8 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SIX2Q9NPC8 NDUFB4P12-201ENST00000513465 390 ntBASIC3.89□□□□□ -1.79
SIX2Q9NPC8 RNU6-1129P-201ENST00000515964 104 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms