Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 AC105914.1-201ENST00000511798 226 ntBASIC3.19□□□□□ -1.9
CHRDL1Q9BU40 RNA5SP135-201ENST00000517019 125 ntBASIC3.19□□□□□ -1.9
CHRDL1Q9BU40 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.19□□□□□ -1.9
CHRDL1Q9BU40 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CHRDL1Q9BU40 AP003066.2-201ENST00000529375 555 ntBASIC3.19□□□□□ -1.9
CHRDL1Q9BU40 PDCL2P2-201ENST00000533651 189 ntBASIC3.19□□□□□ -1.9
CHRDL1Q9BU40 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CHRDL1Q9BU40 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.19□□□□□ -1.9
CHRDL1Q9BU40 AC023825.1-201ENST00000566704 1030 ntBASIC3.19□□□□□ -1.9
CHRDL1Q9BU40 AC007599.1-201ENST00000568688 1174 ntBASIC3.19□□□□□ -1.9
CHRDL1Q9BU40 MIR3186-201ENST00000577404 85 ntBASIC3.19□□□□□ -1.9
CHRDL1Q9BU40 AC006116.7-201ENST00000590141 756 ntBASIC3.19□□□□□ -1.9
CHRDL1Q9BU40 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.19□□□□□ -1.9
CHRDL1Q9BU40 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CHRDL1Q9BU40 IPO5P1-202ENST00000600039 287 ntBASIC3.19□□□□□ -1.9
CHRDL1Q9BU40 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.19□□□□□ -1.9
CHRDL1Q9BU40 Z82195.1-201ENST00000604558 398 ntBASIC3.19□□□□□ -1.9
CHRDL1Q9BU40 AL110115.1-201ENST00000614396 364 ntBASIC3.19□□□□□ -1.9
CHRDL1Q9BU40 AC006338.2-201ENST00000616864 791 ntBASIC3.19□□□□□ -1.9
CHRDL1Q9BU40 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CHRDL1Q9BU40 U7.8-201ENST00000619968 63 ntBASIC3.19□□□□□ -1.9
CHRDL1Q9BU40 AC009318.4-201ENST00000620496 486 ntBASIC3.19□□□□□ -1.9
CHRDL1Q9BU40 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.19□□□□□ -1.9
CHRDL1Q9BU40 AL360181.4-201ENST00000621752 134 ntBASIC3.19□□□□□ -1.9
CHRDL1Q9BU40 MIR3653-201ENST00000625572 110 ntBASIC3.19□□□□□ -1.9
CHRDL1Q9BU40 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.19□□□□□ -1.9
CHRDL1Q9BU40 ZNF663P-202ENST00000641770 1131 ntBASIC3.19□□□□□ -1.9
CHRDL1Q9BU40 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CHRDL1Q9BU40 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.19□□□□□ -1.9
CHRDL1Q9BU40 DBF4P1-201ENST00000412976 1892 ntBASIC3.19□□□□□ -1.9
CHRDL1Q9BU40 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CHRDL1Q9BU40 MTND4P9-201ENST00000507819 1346 ntBASIC3.19□□□□□ -1.9
CHRDL1Q9BU40 AC116667.1-201ENST00000604855 2072 ntBASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 LARP1BP1-201ENST00000506036 1359 ntBASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 SNORD82-201ENST00000365530 70 ntBASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 U6.112-201ENST00000384129 70 ntBASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 AL355615.1-201ENST00000406187 641 ntBASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 RNU6-712P-201ENST00000410558 100 ntBASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 OR8G2P-201ENST00000412796 908 ntBASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 TAF13P2-201ENST00000416876 286 ntBASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 YPEL5P1-201ENST00000419731 367 ntBASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 HSFY7P-201ENST00000432672 318 ntBASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 HSFY8P-201ENST00000437934 318 ntBASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 VN1R25P-201ENST00000443385 738 ntBASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 RPL21P133-201ENST00000443666 476 ntBASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 HSFY5P-201ENST00000453726 309 ntBASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 VN1R40P-201ENST00000455196 941 ntBASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 ARPC3P2-201ENST00000457786 533 ntBASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 UQCRHP4-201ENST00000471686 272 ntBASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 AC017015.1-201ENST00000477387 286 ntBASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 AC091167.1-201ENST00000492017 396 ntBASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 AC108078.3-201ENST00000502633 489 ntBASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 BTF3L4P4-201ENST00000506381 449 ntBASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 RNU7-143P-201ENST00000516781 65 ntBASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 PARP1P2-201ENST00000556806 195 ntBASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 AC122134.1-202ENST00000569111 1201 ntBASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 AC012417.1-201ENST00000582307 1039 ntBASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 MIR3138-201ENST00000585238 82 ntBASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 SNORA51-201ENST00000606420 132 ntBASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 AC024933.1-201ENST00000608472 348 ntBASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 AC092653.1-201ENST00000608509 531 ntBASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 AC008759.3-201ENST00000613300 508 ntBASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 AC092628.2-201ENST00000622492 339 ntBASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 AP003476.1-201ENST00000623984 516 ntBASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 AC010872.1-201ENST00000624225 675 ntBASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 AL773545.4-201ENST00000637262 310 ntBASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 AL513478.4-201ENST00000641636 310 ntBASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CHRDL1Q9BU40 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CHRDL1Q9BU40 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.17□□□□□ -1.9
CHRDL1Q9BU40 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms