Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
VPS50Q96JG6 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
VPS50Q96JG6 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
VPS50Q96JG6 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.53□□□□□ -1.68
VPS50Q96JG6 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
VPS50Q96JG6 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
VPS50Q96JG6 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.52□□□□□ -1.69
VPS50Q96JG6 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VPS50Q96JG6 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
VPS50Q96JG6 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
VPS50Q96JG6 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
VPS50Q96JG6 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
VPS50Q96JG6 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
VPS50Q96JG6 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VPS50Q96JG6 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
VPS50Q96JG6 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
VPS50Q96JG6 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
VPS50Q96JG6 RNU6-192P-201ENST00000391253 100 ntBASIC4.52□□□□□ -1.69
VPS50Q96JG6 Y_RNA.625-201ENST00000411256 107 ntBASIC4.52□□□□□ -1.69
VPS50Q96JG6 FAR2P2-201ENST00000413041 594 ntBASIC4.52□□□□□ -1.69
VPS50Q96JG6 RAC1P3-201ENST00000416129 580 ntBASIC4.52□□□□□ -1.69
VPS50Q96JG6 FAR2P4-202ENST00000425399 584 ntBASIC4.52□□□□□ -1.69
VPS50Q96JG6 UBE2FP3-201ENST00000436366 524 ntBASIC4.52□□□□□ -1.69
VPS50Q96JG6 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.52□□□□□ -1.69
VPS50Q96JG6 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.52□□□□□ -1.69
VPS50Q96JG6 RPL23AP56-201ENST00000460778 453 ntBASIC4.52□□□□□ -1.69
VPS50Q96JG6 AC010326.1-201ENST00000462726 602 ntBASIC4.52□□□□□ -1.69
VPS50Q96JG6 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.52□□□□□ -1.69
VPS50Q96JG6 AC010301.1-201ENST00000473936 355 ntBASIC4.52□□□□□ -1.69
VPS50Q96JG6 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.52□□□□□ -1.69
VPS50Q96JG6 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS50Q96JG6 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
VPS50Q96JG6 KLRA1P-201ENST00000503499 986 ntBASIC4.52□□□□□ -1.69
VPS50Q96JG6 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.52□□□□□ -1.69
VPS50Q96JG6 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS50Q96JG6 OR7H2P-201ENST00000513483 306 ntBASIC4.52□□□□□ -1.69
VPS50Q96JG6 RNU6-150P-201ENST00000516237 95 ntBASIC4.52□□□□□ -1.69
VPS50Q96JG6 RNU6-709P-201ENST00000517257 104 ntBASIC4.52□□□□□ -1.69
VPS50Q96JG6 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VPS50Q96JG6 RAB9BP1-201ENST00000519581 626 ntBASIC4.52□□□□□ -1.69
VPS50Q96JG6 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS50Q96JG6 AP002963.1-201ENST00000530590 184 ntBASIC4.52□□□□□ -1.69
VPS50Q96JG6 AL139174.1-201ENST00000531489 886 ntBASIC4.52□□□□□ -1.69
VPS50Q96JG6 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS50Q96JG6 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
VPS50Q96JG6 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.52□□□□□ -1.69
VPS50Q96JG6 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.52□□□□□ -1.69
VPS50Q96JG6 MIR548AB-201ENST00000584917 84 ntBASIC4.52□□□□□ -1.69
VPS50Q96JG6 AC022726.1-201ENST00000587475 207 ntBASIC4.52□□□□□ -1.69
VPS50Q96JG6 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.52□□□□□ -1.69
VPS50Q96JG6 DEFB131E-202ENST00000602581 683 ntBASIC4.52□□□□□ -1.69
VPS50Q96JG6 AC115621.1-201ENST00000604653 858 ntBASIC4.52□□□□□ -1.69
VPS50Q96JG6 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS50Q96JG6 AC104073.3-201ENST00000610942 955 ntBASIC4.52□□□□□ -1.69
VPS50Q96JG6 AL359535.1-201ENST00000612100 1087 ntBASIC4.52□□□□□ -1.69
VPS50Q96JG6 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VPS50Q96JG6 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS50Q96JG6 AC068792.1-201ENST00000621354 417 ntBASIC4.52□□□□□ -1.69
VPS50Q96JG6 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VPS50Q96JG6 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.52□□□□□ -1.69
VPS50Q96JG6 AC135352.1-201ENST00000506173 1418 ntBASIC4.52□□□□□ -1.69
VPS50Q96JG6 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.52□□□□□ -1.69
VPS50Q96JG6 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VPS50Q96JG6 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VPS50Q96JG6 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.52□□□□□ -1.69
VPS50Q96JG6 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS50Q96JG6 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS50Q96JG6 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VPS50Q96JG6 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS50Q96JG6 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VPS50Q96JG6 AL031985.3-201ENST00000565390 2449 ntBASIC4.51□□□□□ -1.69
VPS50Q96JG6 AL079343.1-201ENST00000572358 1771 ntBASIC4.51□□□□□ -1.69
VPS50Q96JG6 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS50Q96JG6 OR4K15-201ENST00000305051 1216 ntBASIC4.51□□□□□ -1.69
VPS50Q96JG6 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.51□□□□□ -1.69
VPS50Q96JG6 SNORA71.2-201ENST00000364941 134 ntBASIC4.51□□□□□ -1.69
VPS50Q96JG6 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
VPS50Q96JG6 RNY3P10-201ENST00000384764 102 ntBASIC4.51□□□□□ -1.69
VPS50Q96JG6 MIR649-201ENST00000384843 97 ntBASIC4.51□□□□□ -1.69
VPS50Q96JG6 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
VPS50Q96JG6 AL121972.1-201ENST00000402023 252 ntBASIC4.51□□□□□ -1.69
VPS50Q96JG6 MTCYBP36-201ENST00000404146 440 ntBASIC4.51□□□□□ -1.69
VPS50Q96JG6 VN1R8P-201ENST00000407739 893 ntBASIC4.51□□□□□ -1.69
VPS50Q96JG6 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.51□□□□□ -1.69
VPS50Q96JG6 AC016397.1-201ENST00000412463 242 ntBASIC4.51□□□□□ -1.69
VPS50Q96JG6 RPL26P29-201ENST00000415623 438 ntBASIC4.51□□□□□ -1.69
VPS50Q96JG6 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
VPS50Q96JG6 USP9YP14-201ENST00000430663 563 ntBASIC4.51□□□□□ -1.69
VPS50Q96JG6 AL365184.2-201ENST00000431139 435 ntBASIC4.51□□□□□ -1.69
VPS50Q96JG6 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.51□□□□□ -1.69
VPS50Q96JG6 CEACAMP1-201ENST00000434624 1035 ntBASIC4.51□□□□□ -1.69
VPS50Q96JG6 AC005154.2-201ENST00000438110 379 ntBASIC4.51□□□□□ -1.69
VPS50Q96JG6 AL451050.1-201ENST00000450126 415 ntBASIC4.51□□□□□ -1.69
VPS50Q96JG6 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS50Q96JG6 AC097493.1-201ENST00000463958 372 ntBASIC4.51□□□□□ -1.69
VPS50Q96JG6 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.51□□□□□ -1.69
VPS50Q96JG6 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.51□□□□□ -1.69
VPS50Q96JG6 RPL23AP65-201ENST00000475608 468 ntBASIC4.51□□□□□ -1.69
VPS50Q96JG6 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.51□□□□□ -1.69
VPS50Q96JG6 S100A11P1-201ENST00000477525 312 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms