Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AL353597.2-202ENST00000434901 373 ntBASIC5.28□□□□□ -1.56
ERCC4Q92889 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.28□□□□□ -1.56
ERCC4Q92889 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.28□□□□□ -1.56
ERCC4Q92889 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.28□□□□□ -1.56
ERCC4Q92889 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.28□□□□□ -1.56
ERCC4Q92889 MTCO1P27-201ENST00000448269 226 ntBASIC5.28□□□□□ -1.56
ERCC4Q92889 PDSS1P2-201ENST00000449397 678 ntBASIC5.28□□□□□ -1.56
ERCC4Q92889 RPL23AP15-201ENST00000450202 459 ntBASIC5.28□□□□□ -1.56
ERCC4Q92889 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC5.28□□□□□ -1.56
ERCC4Q92889 AL033528.1-201ENST00000453780 140 ntBASIC5.28□□□□□ -1.56
ERCC4Q92889 FGF7P3-201ENST00000454645 303 ntBASIC5.28□□□□□ -1.56
ERCC4Q92889 AC133473.1-201ENST00000455173 299 ntBASIC5.28□□□□□ -1.56
ERCC4Q92889 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.28□□□□□ -1.56
ERCC4Q92889 RPL9P6-201ENST00000492764 598 ntBASIC5.28□□□□□ -1.56
ERCC4Q92889 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC5.28□□□□□ -1.56
ERCC4Q92889 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ERCC4Q92889 PGBD4P4-201ENST00000509673 613 ntBASIC5.28□□□□□ -1.56
ERCC4Q92889 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.28□□□□□ -1.56
ERCC4Q92889 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.28□□□□□ -1.56
ERCC4Q92889 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC5.28□□□□□ -1.56
ERCC4Q92889 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC5.28□□□□□ -1.56
ERCC4Q92889 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.28□□□□□ -1.56
ERCC4Q92889 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.28□□□□□ -1.56
ERCC4Q92889 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5.28□□□□□ -1.56
ERCC4Q92889 MIR5697-201ENST00000578045 78 ntBASIC5.28□□□□□ -1.56
ERCC4Q92889 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC5.28□□□□□ -1.56
ERCC4Q92889 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.28□□□□□ -1.56
ERCC4Q92889 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.28□□□□□ -1.56
ERCC4Q92889 BNIP3P30-201ENST00000601184 574 ntBASIC5.28□□□□□ -1.56
ERCC4Q92889 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC5.28□□□□□ -1.56
ERCC4Q92889 RPL26P30-202ENST00000602923 645 ntBASIC5.28□□□□□ -1.56
ERCC4Q92889 AC098614.4-201ENST00000607601 462 ntBASIC5.28□□□□□ -1.56
ERCC4Q92889 AF250324.2-201ENST00000608299 610 ntBASIC5.28□□□□□ -1.56
ERCC4Q92889 FAM27B-201ENST00000610601 213 ntBASIC5.28□□□□□ -1.56
ERCC4Q92889 AC131902.3-201ENST00000611767 581 ntBASIC5.28□□□□□ -1.56
ERCC4Q92889 AC104010.1-201ENST00000616889 150 ntBASIC5.28□□□□□ -1.56
ERCC4Q92889 AL356321.1-201ENST00000621360 228 ntBASIC5.28□□□□□ -1.56
ERCC4Q92889 MIR6730-201ENST00000622213 67 ntBASIC5.28□□□□□ -1.56
ERCC4Q92889 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC5.28□□□□□ -1.56
ERCC4Q92889 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.28□□□□□ -1.56
ERCC4Q92889 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC5.28□□□□□ -1.56
ERCC4Q92889 OR5H6-203ENST00000642105 978 ntBASIC5.28□□□□□ -1.56
ERCC4Q92889 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.28□□□□□ -1.56
ERCC4Q92889 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
ERCC4Q92889 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ERCC4Q92889 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
ERCC4Q92889 AL136164.3-201ENST00000624429 3978 ntBASIC5.27□□□□□ -1.57
ERCC4Q92889 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.27□□□□□ -1.57
ERCC4Q92889 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.27□□□□□ -1.57
ERCC4Q92889 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC5.27□□□□□ -1.57
ERCC4Q92889 RN7SKP104-201ENST00000362605 328 ntBASIC5.27□□□□□ -1.57
ERCC4Q92889 RNU6-444P-201ENST00000383988 108 ntBASIC5.27□□□□□ -1.57
ERCC4Q92889 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
ERCC4Q92889 RNA5SP372-201ENST00000390836 115 ntBASIC5.27□□□□□ -1.57
ERCC4Q92889 HMGB1P17-201ENST00000403495 628 ntBASIC5.27□□□□□ -1.57
ERCC4Q92889 PRRC2CP1-201ENST00000404428 159 ntBASIC5.27□□□□□ -1.57
ERCC4Q92889 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.27□□□□□ -1.57
ERCC4Q92889 AC009965.2-201ENST00000425328 970 ntBASIC5.27□□□□□ -1.57
ERCC4Q92889 MTND1P2-201ENST00000430604 821 ntBASIC5.27□□□□□ -1.57
ERCC4Q92889 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC5.27□□□□□ -1.57
ERCC4Q92889 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC5.27□□□□□ -1.57
ERCC4Q92889 AC092427.1-201ENST00000439177 601 ntBASIC5.27□□□□□ -1.57
ERCC4Q92889 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.27□□□□□ -1.57
ERCC4Q92889 GDI2P2-201ENST00000445131 608 ntBASIC5.27□□□□□ -1.57
ERCC4Q92889 MTCO1P48-201ENST00000448024 1096 ntBASIC5.27□□□□□ -1.57
ERCC4Q92889 AL162388.1-201ENST00000450912 352 ntBASIC5.27□□□□□ -1.57
ERCC4Q92889 HMGN3P1-201ENST00000453847 193 ntBASIC5.27□□□□□ -1.57
ERCC4Q92889 NDUFA5P12-201ENST00000503796 343 ntBASIC5.27□□□□□ -1.57
ERCC4Q92889 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC5.27□□□□□ -1.57
ERCC4Q92889 AC022483.1-201ENST00000514020 567 ntBASIC5.27□□□□□ -1.57
ERCC4Q92889 AP000676.2-201ENST00000529711 301 ntBASIC5.27□□□□□ -1.57
ERCC4Q92889 DEFB108A-201ENST00000530110 222 ntBASIC5.27□□□□□ -1.57
ERCC4Q92889 OR4A12P-201ENST00000530847 918 ntBASIC5.27□□□□□ -1.57
ERCC4Q92889 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.27□□□□□ -1.57
ERCC4Q92889 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.27□□□□□ -1.57
ERCC4Q92889 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.27□□□□□ -1.57
ERCC4Q92889 AC018552.3-201ENST00000567416 561 ntBASIC5.27□□□□□ -1.57
ERCC4Q92889 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC5.27□□□□□ -1.57
ERCC4Q92889 MIR4646-201ENST00000580775 63 ntBASIC5.27□□□□□ -1.57
ERCC4Q92889 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC5.27□□□□□ -1.57
ERCC4Q92889 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.27□□□□□ -1.57
ERCC4Q92889 AC104785.1-201ENST00000603220 588 ntBASIC5.27□□□□□ -1.57
ERCC4Q92889 AL355816.1-201ENST00000607951 118 ntBASIC5.27□□□□□ -1.57
ERCC4Q92889 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC5.27□□□□□ -1.57
ERCC4Q92889 DLEU1_2.1-201ENST00000617920 342 ntBASIC5.27□□□□□ -1.57
ERCC4Q92889 AC140113.4-201ENST00000622087 222 ntBASIC5.27□□□□□ -1.57
ERCC4Q92889 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.27□□□□□ -1.57
ERCC4Q92889 AC015908.5-201ENST00000623289 343 ntBASIC5.27□□□□□ -1.57
ERCC4Q92889 AC093591.3-201ENST00000634516 308 ntBASIC5.27□□□□□ -1.57
ERCC4Q92889 AC099654.13-201ENST00000639774 207 ntBASIC5.27□□□□□ -1.57
ERCC4Q92889 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ERCC4Q92889 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ERCC4Q92889 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
ERCC4Q92889 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.26□□□□□ -1.57
ERCC4Q92889 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
ERCC4Q92889 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
ERCC4Q92889 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
ERCC4Q92889 AC074029.4-201ENST00000624796 1859 ntBASIC5.26□□□□□ -1.57
ERCC4Q92889 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
ERCC4Q92889 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms