Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CSMD3Q7Z407 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC1.92□□□□□ -2.1
CSMD3Q7Z407 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC1.92□□□□□ -2.1
CSMD3Q7Z407 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
CSMD3Q7Z407 AP002770.2-201ENST00000543613 532 ntBASIC1.92□□□□□ -2.1
CSMD3Q7Z407 AC078814.3-201ENST00000553036 491 ntBASIC1.92□□□□□ -2.1
CSMD3Q7Z407 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC1.92□□□□□ -2.1
CSMD3Q7Z407 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC1.92□□□□□ -2.1
CSMD3Q7Z407 STK31-205ENST00000433467 3085 ntTSL 2 BASIC1.92□□□□□ -2.1
CSMD3Q7Z407 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CSMD3Q7Z407 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.92□□□□□ -2.1
CSMD3Q7Z407 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
CSMD3Q7Z407 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC1.92□□□□□ -2.1
CSMD3Q7Z407 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CSMD3Q7Z407 AC111000.2-201ENST00000507775 550 ntBASIC1.92□□□□□ -2.1
CSMD3Q7Z407 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CSMD3Q7Z407 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.92□□□□□ -2.1
CSMD3Q7Z407 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC1.92□□□□□ -2.1
CSMD3Q7Z407 AC104027.1-201ENST00000521887 300 ntBASIC1.92□□□□□ -2.1
CSMD3Q7Z407 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC1.92□□□□□ -2.1
CSMD3Q7Z407 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC1.92□□□□□ -2.1
CSMD3Q7Z407 MIR4498-201ENST00000577599 66 ntBASIC1.92□□□□□ -2.1
CSMD3Q7Z407 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC1.92□□□□□ -2.1
CSMD3Q7Z407 NTAN1P1-201ENST00000603150 646 ntBASIC1.92□□□□□ -2.1
CSMD3Q7Z407 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC1.92□□□□□ -2.1
CSMD3Q7Z407 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC1.92□□□□□ -2.1
CSMD3Q7Z407 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CSMD3Q7Z407 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
CSMD3Q7Z407 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC1.92□□□□□ -2.1
CSMD3Q7Z407 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CSMD3Q7Z407 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC1.92□□□□□ -2.1
CSMD3Q7Z407 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
CSMD3Q7Z407 RNU6-482P-201ENST00000391068 107 ntBASIC1.92□□□□□ -2.1
CSMD3Q7Z407 AL137014.1-201ENST00000420490 1226 ntBASIC1.92□□□□□ -2.1
CSMD3Q7Z407 RNA5SP282-201ENST00000516355 108 ntBASIC1.92□□□□□ -2.1
CSMD3Q7Z407 RNA5SP148-201ENST00000516527 94 ntBASIC1.92□□□□□ -2.1
CSMD3Q7Z407 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CSMD3Q7Z407 YWHAZP1-201ENST00000556286 722 ntBASIC1.92□□□□□ -2.1
CSMD3Q7Z407 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CSMD3Q7Z407 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CSMD3Q7Z407 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CSMD3Q7Z407 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CSMD3Q7Z407 SAGE4P-201ENST00000442271 3381 ntBASIC1.92□□□□□ -2.1
CSMD3Q7Z407 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC1.91□□□□□ -2.1
CSMD3Q7Z407 SNORA80E-201ENST00000384744 137 ntBASIC1.91□□□□□ -2.1
CSMD3Q7Z407 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC1.91□□□□□ -2.1
CSMD3Q7Z407 OR2B8P-201ENST00000432841 938 ntBASIC1.91□□□□□ -2.1
CSMD3Q7Z407 B3GNT2P1-201ENST00000434960 952 ntBASIC1.91□□□□□ -2.1
CSMD3Q7Z407 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.91□□□□□ -2.1
CSMD3Q7Z407 HMGB1P15-201ENST00000453854 435 ntBASIC1.91□□□□□ -2.1
CSMD3Q7Z407 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CSMD3Q7Z407 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.91□□□□□ -2.1
CSMD3Q7Z407 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC1.91□□□□□ -2.1
CSMD3Q7Z407 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.91□□□□□ -2.1
CSMD3Q7Z407 RPL7P20-201ENST00000520308 745 ntBASIC1.91□□□□□ -2.1
CSMD3Q7Z407 AL390334.1-201ENST00000556395 450 ntBASIC1.91□□□□□ -2.1
CSMD3Q7Z407 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.91□□□□□ -2.1
CSMD3Q7Z407 OR4G2P-202ENST00000641004 1759 ntBASIC1.91□□□□□ -2.1
CSMD3Q7Z407 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC1.91□□□□□ -2.1
CSMD3Q7Z407 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CSMD3Q7Z407 SYT14P1-202ENST00000600441 1448 ntBASIC1.91□□□□□ -2.1
CSMD3Q7Z407 AC006020.1-201ENST00000420179 1854 ntBASIC1.91□□□□□ -2.1
CSMD3Q7Z407 GLS-203ENST00000409215 632 ntTSL 4 BASIC1.91□□□□□ -2.1
CSMD3Q7Z407 Z98742.3-201ENST00000418637 326 ntBASIC1.91□□□□□ -2.1
CSMD3Q7Z407 Z82209.1-201ENST00000422141 2135 ntBASIC1.91□□□□□ -2.1
CSMD3Q7Z407 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.91□□□□□ -2.1
CSMD3Q7Z407 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.91□□□□□ -2.1
CSMD3Q7Z407 ASNSP4-201ENST00000511103 447 ntBASIC1.91□□□□□ -2.1
CSMD3Q7Z407 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.91□□□□□ -2.1
CSMD3Q7Z407 AC141257.3-201ENST00000572906 215 ntBASIC1.91□□□□□ -2.1
CSMD3Q7Z407 AC010620.2-201ENST00000600135 313 ntBASIC1.91□□□□□ -2.1
CSMD3Q7Z407 AC019080.5-201ENST00000624891 757 ntBASIC1.91□□□□□ -2.1
CSMD3Q7Z407 MIR592-201ENST00000384959 97 ntBASIC1.91□□□□□ -2.1
CSMD3Q7Z407 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC1.91□□□□□ -2.1
CSMD3Q7Z407 AC146507.2-201ENST00000460608 476 ntBASIC1.91□□□□□ -2.1
CSMD3Q7Z407 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CSMD3Q7Z407 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.91□□□□□ -2.1
CSMD3Q7Z407 AC090281.1-201ENST00000523019 276 ntBASIC1.91□□□□□ -2.1
CSMD3Q7Z407 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC1.91□□□□□ -2.1
CSMD3Q7Z407 CTSLP2-204ENST00000629029 392 ntBASIC1.91□□□□□ -2.1
CSMD3Q7Z407 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CSMD3Q7Z407 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC1.91□□□□□ -2.1
CSMD3Q7Z407 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.91□□□□□ -2.1
CSMD3Q7Z407 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CSMD3Q7Z407 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CSMD3Q7Z407 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC1.91□□□□□ -2.1
CSMD3Q7Z407 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CSMD3Q7Z407 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
CSMD3Q7Z407 RPL21P132-201ENST00000331267 462 ntBASIC1.9□□□□□ -2.1
CSMD3Q7Z407 Y_RNA.796-201ENST00000364268 102 ntBASIC1.9□□□□□ -2.1
CSMD3Q7Z407 Y_RNA.799-201ENST00000364992 102 ntBASIC1.9□□□□□ -2.1
CSMD3Q7Z407 RNA5SP508-201ENST00000411327 119 ntBASIC1.9□□□□□ -2.1
CSMD3Q7Z407 AC009263.1-201ENST00000441193 1239 ntBASIC1.9□□□□□ -2.1
CSMD3Q7Z407 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC1.9□□□□□ -2.1
CSMD3Q7Z407 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
CSMD3Q7Z407 RPS26P24-201ENST00000497656 331 ntBASIC1.9□□□□□ -2.1
CSMD3Q7Z407 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC1.9□□□□□ -2.1
CSMD3Q7Z407 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
CSMD3Q7Z407 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC1.9□□□□□ -2.1
CSMD3Q7Z407 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms