Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AP001636.2-201ENST00000525517 696 ntBASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 MED28P5-201ENST00000528254 438 ntBASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 TRAV15-201ENST00000556680 249 ntBASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 TVP23BP1-201ENST00000557500 617 ntBASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 AC079171.1-201ENST00000568788 914 ntBASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 MTND3P13-201ENST00000574391 343 ntBASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 BNIP3P26-201ENST00000600827 554 ntBASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 AC105148.1-201ENST00000604961 409 ntBASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 AC010738.1-201ENST00000604970 987 ntBASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 AC006338.2-201ENST00000616864 791 ntBASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 CYCSP41-201ENST00000616920 296 ntBASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 AC010608.3-201ENST00000625048 527 ntBASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 MAPK10-372ENST00000641954 3413 ntBASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NHLRC1Q6VVB1 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 MTND4P10-201ENST00000446199 1363 ntBASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 AC116667.1-201ENST00000604855 2072 ntBASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 MIR383-201ENST00000362257 73 ntBASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 RNU6-600P-201ENST00000362524 99 ntBASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 SNORA70.2-201ENST00000364506 135 ntBASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 RNU1-89P-201ENST00000384592 164 ntBASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 USP9YP24-201ENST00000434374 697 ntBASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 USP9YP17-201ENST00000444617 696 ntBASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 AL589880.1-201ENST00000448271 287 ntBASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 DUXAP8-207ENST00000456786 622 ntBASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 IGKV2-38-201ENST00000517443 247 ntBASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 AC005832.3-201ENST00000537929 631 ntBASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 EEF1B2P4-201ENST00000551398 348 ntBASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 RPP40P2-201ENST00000603596 712 ntBASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 AC020910.2-201ENST00000603635 610 ntBASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 AL365400.2-201ENST00000605604 902 ntBASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 AC012531.5-201ENST00000611375 151 ntBASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 DUXAP10-204ENST00000612052 616 ntBASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 AC023043.4-201ENST00000612081 449 ntBASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 AC023158.2-201ENST00000614876 543 ntBASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 AC090772.4-201ENST00000623599 362 ntBASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.66□□□□□ -1.82
NHLRC1Q6VVB1 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.65□□□□□ -1.82
NHLRC1Q6VVB1 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.65□□□□□ -1.82
NHLRC1Q6VVB1 LINC02471-203ENST00000641941 4752 ntBASIC3.65□□□□□ -1.83
NHLRC1Q6VVB1 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NHLRC1Q6VVB1 RNA5SP235-201ENST00000365411 114 ntBASIC3.65□□□□□ -1.83
NHLRC1Q6VVB1 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
NHLRC1Q6VVB1 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
NHLRC1Q6VVB1 AC016769.3-201ENST00000396562 315 ntBASIC3.65□□□□□ -1.83
NHLRC1Q6VVB1 HSPE1P26-201ENST00000405341 275 ntBASIC3.65□□□□□ -1.83
NHLRC1Q6VVB1 AL583834.1-201ENST00000406943 343 ntBASIC3.65□□□□□ -1.83
NHLRC1Q6VVB1 PGBD4P8-201ENST00000412993 562 ntBASIC3.65□□□□□ -1.83
NHLRC1Q6VVB1 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.65□□□□□ -1.83
NHLRC1Q6VVB1 LUZP4P1-201ENST00000415420 344 ntBASIC3.65□□□□□ -1.83
NHLRC1Q6VVB1 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NHLRC1Q6VVB1 RPS3AP37-201ENST00000419176 745 ntBASIC3.65□□□□□ -1.83
NHLRC1Q6VVB1 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.65□□□□□ -1.83
NHLRC1Q6VVB1 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.65□□□□□ -1.83
NHLRC1Q6VVB1 VDAC1P3-201ENST00000434069 851 ntBASIC3.65□□□□□ -1.83
NHLRC1Q6VVB1 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.65□□□□□ -1.83
NHLRC1Q6VVB1 CYCSP43-201ENST00000438233 310 ntBASIC3.65□□□□□ -1.83
NHLRC1Q6VVB1 AL121871.1-201ENST00000443413 436 ntBASIC3.65□□□□□ -1.83
NHLRC1Q6VVB1 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.65□□□□□ -1.83
NHLRC1Q6VVB1 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.65□□□□□ -1.83
NHLRC1Q6VVB1 OFD1P3Y-201ENST00000453312 783 ntBASIC3.65□□□□□ -1.83
NHLRC1Q6VVB1 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.65□□□□□ -1.83
NHLRC1Q6VVB1 RPL36AP13-201ENST00000457490 317 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms