Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.29□□□□□ -1.72
USP41Q3LFD5 RAC1P3-201ENST00000416129 580 ntBASIC4.29□□□□□ -1.72
USP41Q3LFD5 AC006960.1-201ENST00000419980 153 ntBASIC4.29□□□□□ -1.72
USP41Q3LFD5 MTCO3P1-205ENST00000422088 832 ntBASIC4.29□□□□□ -1.72
USP41Q3LFD5 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.29□□□□□ -1.72
USP41Q3LFD5 AL451062.2-201ENST00000427515 271 ntBASIC4.29□□□□□ -1.72
USP41Q3LFD5 Z77249.1-201ENST00000444622 1175 ntBASIC4.29□□□□□ -1.72
USP41Q3LFD5 EXTL2P1-201ENST00000446218 416 ntBASIC4.29□□□□□ -1.72
USP41Q3LFD5 MTCO2P25-201ENST00000447065 681 ntBASIC4.29□□□□□ -1.72
USP41Q3LFD5 AL133547.1-201ENST00000448546 220 ntBASIC4.29□□□□□ -1.72
USP41Q3LFD5 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.29□□□□□ -1.72
USP41Q3LFD5 RPS11P1-201ENST00000451072 473 ntBASIC4.29□□□□□ -1.72
USP41Q3LFD5 HMGN3P1-201ENST00000453847 193 ntBASIC4.29□□□□□ -1.72
USP41Q3LFD5 AC004263.1-201ENST00000479327 332 ntBASIC4.29□□□□□ -1.72
USP41Q3LFD5 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.29□□□□□ -1.72
USP41Q3LFD5 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.29□□□□□ -1.72
USP41Q3LFD5 SNORA48.10-201ENST00000516965 160 ntBASIC4.29□□□□□ -1.72
USP41Q3LFD5 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.29□□□□□ -1.72
USP41Q3LFD5 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.29□□□□□ -1.72
USP41Q3LFD5 MTATP6P15-201ENST00000527233 835 ntBASIC4.29□□□□□ -1.72
USP41Q3LFD5 PDCL2P2-201ENST00000533651 189 ntBASIC4.29□□□□□ -1.72
USP41Q3LFD5 AP000619.3-201ENST00000535634 1127 ntBASIC4.29□□□□□ -1.72
USP41Q3LFD5 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.29□□□□□ -1.72
USP41Q3LFD5 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.29□□□□□ -1.72
USP41Q3LFD5 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.29□□□□□ -1.72
USP41Q3LFD5 AC009094.1-201ENST00000564443 426 ntBASIC4.29□□□□□ -1.72
USP41Q3LFD5 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
USP41Q3LFD5 AC138915.2-201ENST00000569776 97 ntBASIC4.29□□□□□ -1.72
USP41Q3LFD5 HNRNPCP4-201ENST00000571636 900 ntBASIC4.29□□□□□ -1.72
USP41Q3LFD5 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.29□□□□□ -1.72
USP41Q3LFD5 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.29□□□□□ -1.72
USP41Q3LFD5 AC008751.2-201ENST00000597885 980 ntBASIC4.29□□□□□ -1.72
USP41Q3LFD5 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.29□□□□□ -1.72
USP41Q3LFD5 AC092954.1-201ENST00000609121 445 ntBASIC4.29□□□□□ -1.72
USP41Q3LFD5 AC131235.4-201ENST00000609288 620 ntBASIC4.29□□□□□ -1.72
USP41Q3LFD5 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
USP41Q3LFD5 AL359535.1-201ENST00000612100 1087 ntBASIC4.29□□□□□ -1.72
USP41Q3LFD5 AP000484.1-201ENST00000620067 1252 ntBASIC4.29□□□□□ -1.72
USP41Q3LFD5 MIR6075-201ENST00000620782 95 ntBASIC4.29□□□□□ -1.72
USP41Q3LFD5 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.29□□□□□ -1.72
USP41Q3LFD5 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.29□□□□□ -1.72
USP41Q3LFD5 AC073348.1-201ENST00000623002 331 ntBASIC4.29□□□□□ -1.72
USP41Q3LFD5 AC017037.3-201ENST00000625016 472 ntBASIC4.29□□□□□ -1.72
USP41Q3LFD5 AC019226.2-201ENST00000625973 424 ntBASIC4.29□□□□□ -1.72
USP41Q3LFD5 AC068620.4-201ENST00000636730 1182 ntBASIC4.29□□□□□ -1.72
USP41Q3LFD5 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
USP41Q3LFD5 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
USP41Q3LFD5 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
USP41Q3LFD5 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.29□□□□□ -1.72
USP41Q3LFD5 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
USP41Q3LFD5 AL161912.2-201ENST00000565707 3007 ntBASIC4.29□□□□□ -1.72
USP41Q3LFD5 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
USP41Q3LFD5 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
USP41Q3LFD5 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
USP41Q3LFD5 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.28□□□□□ -1.72
USP41Q3LFD5 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.28□□□□□ -1.72
USP41Q3LFD5 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
USP41Q3LFD5 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.28□□□□□ -1.72
USP41Q3LFD5 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
USP41Q3LFD5 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.28□□□□□ -1.72
USP41Q3LFD5 SUGT1P1-201ENST00000379514 476 ntBASIC4.28□□□□□ -1.72
USP41Q3LFD5 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
USP41Q3LFD5 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
USP41Q3LFD5 AL121978.1-201ENST00000402778 359 ntBASIC4.28□□□□□ -1.72
USP41Q3LFD5 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.28□□□□□ -1.72
USP41Q3LFD5 AC092634.6-201ENST00000418558 192 ntBASIC4.28□□□□□ -1.72
USP41Q3LFD5 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.28□□□□□ -1.72
USP41Q3LFD5 AL139421.1-201ENST00000423010 169 ntBASIC4.28□□□□□ -1.72
USP41Q3LFD5 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.28□□□□□ -1.72
USP41Q3LFD5 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.28□□□□□ -1.72
USP41Q3LFD5 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
USP41Q3LFD5 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.28□□□□□ -1.72
USP41Q3LFD5 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.28□□□□□ -1.72
USP41Q3LFD5 AL500522.2-201ENST00000448562 343 ntBASIC4.28□□□□□ -1.72
USP41Q3LFD5 AC022034.3-201ENST00000471393 478 ntBASIC4.28□□□□□ -1.72
USP41Q3LFD5 SETP14-201ENST00000497538 873 ntBASIC4.28□□□□□ -1.72
USP41Q3LFD5 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.28□□□□□ -1.72
USP41Q3LFD5 OR5H4P-201ENST00000510851 923 ntBASIC4.28□□□□□ -1.72
USP41Q3LFD5 RNA5SP143-201ENST00000516936 115 ntBASIC4.28□□□□□ -1.72
USP41Q3LFD5 IGLVIV-53-201ENST00000520107 367 ntBASIC4.28□□□□□ -1.72
USP41Q3LFD5 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.28□□□□□ -1.72
USP41Q3LFD5 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.28□□□□□ -1.72
USP41Q3LFD5 AC022790.1-201ENST00000522872 204 ntBASIC4.28□□□□□ -1.72
USP41Q3LFD5 AC090819.1-201ENST00000523800 1111 ntBASIC4.28□□□□□ -1.72
USP41Q3LFD5 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.28□□□□□ -1.72
USP41Q3LFD5 CYCSP30-201ENST00000546447 172 ntBASIC4.28□□□□□ -1.72
USP41Q3LFD5 MTCYBP27-201ENST00000555160 670 ntBASIC4.28□□□□□ -1.72
USP41Q3LFD5 AC145350.1-201ENST00000567426 208 ntBASIC4.28□□□□□ -1.72
USP41Q3LFD5 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.28□□□□□ -1.72
USP41Q3LFD5 MIR4504-201ENST00000577413 92 ntBASIC4.28□□□□□ -1.72
USP41Q3LFD5 AC053481.3-201ENST00000577881 843 ntBASIC4.28□□□□□ -1.72
USP41Q3LFD5 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.28□□□□□ -1.72
USP41Q3LFD5 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.28□□□□□ -1.72
USP41Q3LFD5 AL139344.1-201ENST00000605228 195 ntBASIC4.28□□□□□ -1.72
USP41Q3LFD5 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.28□□□□□ -1.72
USP41Q3LFD5 AC116618.1-201ENST00000634617 774 ntBASIC4.28□□□□□ -1.72
USP41Q3LFD5 MIR1322-201ENST00000638013 71 ntBASIC4.28□□□□□ -1.72
USP41Q3LFD5 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
USP41Q3LFD5 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.28□□□□□ -1.72
USP41Q3LFD5 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms