Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 OR6C73P-201ENST00000546432 358 ntBASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 AC105129.1-201ENST00000560250 297 ntBASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 AC124068.1-201ENST00000563131 678 ntBASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 PRELID3BP8-201ENST00000604148 295 ntBASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 AL008729.2-201ENST00000606393 473 ntBASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 AL159169.3-201ENST00000608871 561 ntBASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 AC025588.4-201ENST00000615802 908 ntBASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 AC073968.1-201ENST00000618594 637 ntBASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 MIR6810-201ENST00000622701 70 ntBASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 TEX21P-201ENST00000447107 1476 ntBASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 AL592148.3-201ENST00000608771 2646 ntBASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 AC104118.1-201ENST00000607625 1589 ntBASIC4.53□□□□□ -1.69
PTCHD3Q3KNS1 ELL2P4-201ENST00000446870 1376 ntBASIC4.53□□□□□ -1.69
PTCHD3Q3KNS1 AL122126.1-201ENST00000546905 1318 ntBASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 Z95327.2-201ENST00000414579 1873 ntBASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 AC130650.2-201ENST00000618736 2403 ntBASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 Y_RNA.97-201ENST00000363094 102 ntBASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 RNU5E-5P-201ENST00000365379 116 ntBASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 RNU6-1226P-201ENST00000384317 107 ntBASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 RNU6-1215P-201ENST00000384441 102 ntBASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 SSXP10-201ENST00000402595 565 ntBASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 AL024474.1-201ENST00000404655 591 ntBASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 RN7SKP267-201ENST00000410381 285 ntBASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 AC069218.2-201ENST00000411665 344 ntBASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 NUP35P2-201ENST00000416748 943 ntBASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 FNDC3CP-201ENST00000420795 1155 ntBASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 MTND6P18-201ENST00000439477 513 ntBASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 PTMAP3-201ENST00000447474 330 ntBASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 RPL31P50-201ENST00000471002 296 ntBASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 AC104763.1-201ENST00000475274 360 ntBASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 RN7SL481P-201ENST00000477764 299 ntBASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 CEACAMP10-202ENST00000495431 496 ntBASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 AC109464.2-201ENST00000510242 943 ntBASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 DUXAP2-201ENST00000519198 589 ntBASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 AL110118.1-201ENST00000553543 400 ntBASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 AL133457.1-201ENST00000564251 987 ntBASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 MIR4512-201ENST00000583257 77 ntBASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 AC097468.3-201ENST00000607956 456 ntBASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 AC027807.2-201ENST00000616099 408 ntBASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 AL357080.1-201ENST00000617394 239 ntBASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 AC138932.5-201ENST00000617759 563 ntBASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 AC139713.2-215ENST00000641428 5037 ntBASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
PTCHD3Q3KNS1 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 GDI2P1-201ENST00000429312 1336 ntBASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 Y_RNA.3-201ENST00000362331 103 ntBASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 RNU6-952P-201ENST00000391164 108 ntBASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 MTCYBP36-201ENST00000404146 440 ntBASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 AC073136.2-201ENST00000417282 849 ntBASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 AC009480.2-201ENST00000422916 432 ntBASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 Z74021.1-201ENST00000423610 407 ntBASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 AC068287.1-201ENST00000430283 295 ntBASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 AC109583.1-201ENST00000432156 268 ntBASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 RPL12P46-201ENST00000436610 195 ntBASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 MTND5P14-201ENST00000441481 1267 ntBASIC4.51□□□□□ -1.69
PTCHD3Q3KNS1 ARL2BPP10-201ENST00000446487 531 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms