Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 PSMA2P3-201ENST00000429685 675 ntBASIC2.88□□□□□ -1.95
H3F3AP84243 AC009969.1-201ENST00000438726 172 ntBASIC2.88□□□□□ -1.95
H3F3AP84243 PTGES3P5-201ENST00000455109 434 ntBASIC2.88□□□□□ -1.95
H3F3AP84243 RPL37P3-201ENST00000456825 293 ntBASIC2.88□□□□□ -1.95
H3F3AP84243 RN7SL807P-201ENST00000470923 297 ntBASIC2.88□□□□□ -1.95
H3F3AP84243 RN7SL283P-201ENST00000489055 303 ntBASIC2.88□□□□□ -1.95
H3F3AP84243 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC2.88□□□□□ -1.95
H3F3AP84243 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.88□□□□□ -1.95
H3F3AP84243 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.88□□□□□ -1.95
H3F3AP84243 AC005351.1-201ENST00000511152 786 ntBASIC2.88□□□□□ -1.95
H3F3AP84243 SNORA64.4-201ENST00000516632 81 ntBASIC2.88□□□□□ -1.95
H3F3AP84243 SCARNA20.6-201ENST00000517251 106 ntBASIC2.88□□□□□ -1.95
H3F3AP84243 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC2.88□□□□□ -1.95
H3F3AP84243 IGKV2-36-201ENST00000519999 223 ntBASIC2.88□□□□□ -1.95
H3F3AP84243 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC2.88□□□□□ -1.95
H3F3AP84243 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.88□□□□□ -1.95
H3F3AP84243 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.88□□□□□ -1.95
H3F3AP84243 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
H3F3AP84243 AC024220.1-201ENST00000603675 484 ntBASIC2.88□□□□□ -1.95
H3F3AP84243 AC015849.2-201ENST00000605738 409 ntBASIC2.88□□□□□ -1.95
H3F3AP84243 AC016877.3-201ENST00000606778 504 ntBASIC2.88□□□□□ -1.95
H3F3AP84243 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC2.88□□□□□ -1.95
H3F3AP84243 MIR4496-201ENST00000635896 61 ntBASIC2.88□□□□□ -1.95
H3F3AP84243 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
H3F3AP84243 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.88□□□□□ -1.95
H3F3AP84243 AL672296.1-201ENST00000427780 2158 ntBASIC2.88□□□□□ -1.95
H3F3AP84243 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
H3F3AP84243 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
H3F3AP84243 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
H3F3AP84243 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.87□□□□□ -1.95
H3F3AP84243 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
H3F3AP84243 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
H3F3AP84243 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
H3F3AP84243 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
H3F3AP84243 SNORA51.2-201ENST00000364595 132 ntBASIC2.87□□□□□ -1.95
H3F3AP84243 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
H3F3AP84243 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.87□□□□□ -1.95
H3F3AP84243 U3.19-201ENST00000390893 196 ntBASIC2.87□□□□□ -1.95
H3F3AP84243 AL590290.1-201ENST00000405336 380 ntBASIC2.87□□□□□ -1.95
H3F3AP84243 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC2.87□□□□□ -1.95
H3F3AP84243 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC2.87□□□□□ -1.95
H3F3AP84243 RPS15AP40-201ENST00000419621 391 ntBASIC2.87□□□□□ -1.95
H3F3AP84243 SDCBPP3-201ENST00000419629 891 ntBASIC2.87□□□□□ -1.95
H3F3AP84243 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
H3F3AP84243 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.87□□□□□ -1.95
H3F3AP84243 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.87□□□□□ -1.95
H3F3AP84243 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.87□□□□□ -1.95
H3F3AP84243 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.87□□□□□ -1.95
H3F3AP84243 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC2.87□□□□□ -1.95
H3F3AP84243 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC2.87□□□□□ -1.95
H3F3AP84243 ARPC3P2-201ENST00000457786 533 ntBASIC2.87□□□□□ -1.95
H3F3AP84243 AC096992.1-201ENST00000459808 709 ntBASIC2.87□□□□□ -1.95
H3F3AP84243 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.87□□□□□ -1.95
H3F3AP84243 AC109925.1-201ENST00000478069 331 ntBASIC2.87□□□□□ -1.95
H3F3AP84243 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.87□□□□□ -1.95
H3F3AP84243 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.87□□□□□ -1.95
H3F3AP84243 SLC25A15P5-201ENST00000508033 253 ntBASIC2.87□□□□□ -1.95
H3F3AP84243 MTND4LP22-201ENST00000508209 276 ntBASIC2.87□□□□□ -1.95
H3F3AP84243 AC025857.1-201ENST00000525252 377 ntBASIC2.87□□□□□ -1.95
H3F3AP84243 AL163153.1-201ENST00000554223 283 ntBASIC2.87□□□□□ -1.95
H3F3AP84243 OR4T1P-201ENST00000554933 911 ntBASIC2.87□□□□□ -1.95
H3F3AP84243 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC2.87□□□□□ -1.95
H3F3AP84243 MIR4506-201ENST00000584693 77 ntBASIC2.87□□□□□ -1.95
H3F3AP84243 AL031985.2-201ENST00000600955 480 ntBASIC2.87□□□□□ -1.95
H3F3AP84243 MIR7112-201ENST00000616126 65 ntBASIC2.87□□□□□ -1.95
H3F3AP84243 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.87□□□□□ -1.95
H3F3AP84243 AF117829.1-206ENST00000621883 3802 ntBASIC2.87□□□□□ -1.95
H3F3AP84243 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
H3F3AP84243 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
H3F3AP84243 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.87□□□□□ -1.95
H3F3AP84243 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
H3F3AP84243 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.86□□□□□ -1.95
H3F3AP84243 MIR148B-201ENST00000362252 99 ntBASIC2.86□□□□□ -1.95
H3F3AP84243 RNU6-386P-201ENST00000362650 107 ntBASIC2.86□□□□□ -1.95
H3F3AP84243 RNA5SP44-201ENST00000410446 133 ntBASIC2.86□□□□□ -1.95
H3F3AP84243 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.86□□□□□ -1.95
H3F3AP84243 NDUFB4P5-201ENST00000415445 361 ntBASIC2.86□□□□□ -1.95
H3F3AP84243 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.86□□□□□ -1.95
H3F3AP84243 AC012498.1-201ENST00000424037 437 ntBASIC2.86□□□□□ -1.95
H3F3AP84243 OR51AB1P-201ENST00000429046 620 ntBASIC2.86□□□□□ -1.95
H3F3AP84243 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.86□□□□□ -1.95
H3F3AP84243 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC2.86□□□□□ -1.95
H3F3AP84243 AL606490.8-201ENST00000441624 319 ntBASIC2.86□□□□□ -1.95
H3F3AP84243 AL591503.2-201ENST00000442314 1005 ntBASIC2.86□□□□□ -1.95
H3F3AP84243 RPL7P59-201ENST00000447700 943 ntBASIC2.86□□□□□ -1.95
H3F3AP84243 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
H3F3AP84243 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.86□□□□□ -1.95
H3F3AP84243 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.86□□□□□ -1.95
H3F3AP84243 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
H3F3AP84243 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.86□□□□□ -1.95
H3F3AP84243 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.86□□□□□ -1.95
H3F3AP84243 MIR5680-201ENST00000577577 84 ntBASIC2.86□□□□□ -1.95
H3F3AP84243 MIR3944-201ENST00000581277 108 ntBASIC2.86□□□□□ -1.95
H3F3AP84243 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC2.86□□□□□ -1.95
H3F3AP84243 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.86□□□□□ -1.95
H3F3AP84243 SNRPGP15-201ENST00000600149 222 ntBASIC2.86□□□□□ -1.95
H3F3AP84243 AL606834.2-201ENST00000602954 668 ntBASIC2.86□□□□□ -1.95
H3F3AP84243 SRGNP1-201ENST00000603392 451 ntBASIC2.86□□□□□ -1.95
H3F3AP84243 HMGB1P51-201ENST00000605166 638 ntBASIC2.86□□□□□ -1.95
H3F3AP84243 YPEL5P2-201ENST00000605553 359 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms