Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.53□□□□□ -1.68
CLRN1P58418 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.53□□□□□ -1.68
CLRN1P58418 AC019097.1-201ENST00000424783 735 ntBASIC4.53□□□□□ -1.68
CLRN1P58418 MTND4P28-201ENST00000426217 387 ntBASIC4.53□□□□□ -1.68
CLRN1P58418 RPS26P47-201ENST00000427219 348 ntBASIC4.53□□□□□ -1.68
CLRN1P58418 PSMA6P3-201ENST00000428242 164 ntBASIC4.53□□□□□ -1.68
CLRN1P58418 OR2B7P-201ENST00000429302 934 ntBASIC4.53□□□□□ -1.68
CLRN1P58418 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.53□□□□□ -1.68
CLRN1P58418 OR52B5P-201ENST00000435337 951 ntBASIC4.53□□□□□ -1.68
CLRN1P58418 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.53□□□□□ -1.68
CLRN1P58418 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.53□□□□□ -1.68
CLRN1P58418 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.53□□□□□ -1.68
CLRN1P58418 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.53□□□□□ -1.68
CLRN1P58418 UBE2V1P7-201ENST00000446395 340 ntBASIC4.53□□□□□ -1.68
CLRN1P58418 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.53□□□□□ -1.68
CLRN1P58418 AP1S2P1-201ENST00000457344 379 ntBASIC4.53□□□□□ -1.68
CLRN1P58418 RN7SL172P-201ENST00000460535 303 ntBASIC4.53□□□□□ -1.68
CLRN1P58418 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.53□□□□□ -1.68
CLRN1P58418 RN7SL30P-201ENST00000488416 306 ntBASIC4.53□□□□□ -1.68
CLRN1P58418 AC023194.1-201ENST00000493084 308 ntBASIC4.53□□□□□ -1.68
CLRN1P58418 RPS4XP18-201ENST00000495480 763 ntBASIC4.53□□□□□ -1.68
CLRN1P58418 STMN1P2-201ENST00000508435 439 ntBASIC4.53□□□□□ -1.68
CLRN1P58418 AC110792.2-201ENST00000510278 224 ntBASIC4.53□□□□□ -1.68
CLRN1P58418 AC046134.1-201ENST00000514454 666 ntBASIC4.53□□□□□ -1.68
CLRN1P58418 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.53□□□□□ -1.68
CLRN1P58418 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.53□□□□□ -1.68
CLRN1P58418 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.53□□□□□ -1.68
CLRN1P58418 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.53□□□□□ -1.68
CLRN1P58418 AP003034.1-201ENST00000534621 422 ntBASIC4.53□□□□□ -1.68
CLRN1P58418 AC024224.1-201ENST00000538284 609 ntBASIC4.53□□□□□ -1.68
CLRN1P58418 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.53□□□□□ -1.68
CLRN1P58418 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.53□□□□□ -1.68
CLRN1P58418 SUB1P2-201ENST00000556401 297 ntBASIC4.53□□□□□ -1.68
CLRN1P58418 AC124068.1-201ENST00000563131 678 ntBASIC4.53□□□□□ -1.68
CLRN1P58418 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
CLRN1P58418 AC090616.5-202ENST00000582111 297 ntBASIC4.53□□□□□ -1.68
CLRN1P58418 MIR4719-201ENST00000585233 84 ntBASIC4.53□□□□□ -1.68
CLRN1P58418 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.53□□□□□ -1.68
CLRN1P58418 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.53□□□□□ -1.68
CLRN1P58418 AC121334.2-201ENST00000605387 271 ntBASIC4.53□□□□□ -1.68
CLRN1P58418 AL391813.2-201ENST00000609113 322 ntBASIC4.53□□□□□ -1.68
CLRN1P58418 AC099494.2-201ENST00000623371 978 ntBASIC4.53□□□□□ -1.68
CLRN1P58418 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.53□□□□□ -1.68
CLRN1P58418 AC099654.5-201ENST00000636479 350 ntBASIC4.53□□□□□ -1.68
CLRN1P58418 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.53□□□□□ -1.68
CLRN1P58418 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CLRN1P58418 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLRN1P58418 AL354685.2-201ENST00000448218 1447 ntBASIC4.53□□□□□ -1.68
CLRN1P58418 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLRN1P58418 AC011755.1-201ENST00000623763 2049 ntBASIC4.53□□□□□ -1.68
CLRN1P58418 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.53□□□□□ -1.68
CLRN1P58418 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLRN1P58418 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
CLRN1P58418 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLRN1P58418 NUP58P1-201ENST00000502546 1738 ntBASIC4.52□□□□□ -1.69
CLRN1P58418 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLRN1P58418 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.52□□□□□ -1.69
CLRN1P58418 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
CLRN1P58418 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLRN1P58418 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.52□□□□□ -1.69
CLRN1P58418 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
CLRN1P58418 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLRN1P58418 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.52□□□□□ -1.69
CLRN1P58418 U3.2-201ENST00000362981 210 ntBASIC4.52□□□□□ -1.69
CLRN1P58418 Y_RNA.159-201ENST00000363674 87 ntBASIC4.52□□□□□ -1.69
CLRN1P58418 RN7SKP269-201ENST00000365545 319 ntBASIC4.52□□□□□ -1.69
CLRN1P58418 RNU6-877P-201ENST00000383868 107 ntBASIC4.52□□□□□ -1.69
CLRN1P58418 MIR223-201ENST00000385204 110 ntBASIC4.52□□□□□ -1.69
CLRN1P58418 AC012065.2-201ENST00000421295 375 ntBASIC4.52□□□□□ -1.69
CLRN1P58418 AL353193.1-201ENST00000421444 268 ntBASIC4.52□□□□□ -1.69
CLRN1P58418 AC079355.1-201ENST00000421770 223 ntBASIC4.52□□□□□ -1.69
CLRN1P58418 AL139148.1-201ENST00000427122 680 ntBASIC4.52□□□□□ -1.69
CLRN1P58418 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.52□□□□□ -1.69
CLRN1P58418 USP9YP8-201ENST00000441913 500 ntBASIC4.52□□□□□ -1.69
CLRN1P58418 RPL23AP20-201ENST00000447965 421 ntBASIC4.52□□□□□ -1.69
CLRN1P58418 AP001992.1-205ENST00000462248 379 ntBASIC4.52□□□□□ -1.69
CLRN1P58418 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.52□□□□□ -1.69
CLRN1P58418 RPS18P6-201ENST00000476880 458 ntBASIC4.52□□□□□ -1.69
CLRN1P58418 UBA52P7-201ENST00000486088 380 ntBASIC4.52□□□□□ -1.69
CLRN1P58418 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.52□□□□□ -1.69
CLRN1P58418 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.52□□□□□ -1.69
CLRN1P58418 AC010587.1-201ENST00000505809 469 ntBASIC4.52□□□□□ -1.69
CLRN1P58418 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.52□□□□□ -1.69
CLRN1P58418 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.52□□□□□ -1.69
CLRN1P58418 CBX3P7-201ENST00000532876 502 ntBASIC4.52□□□□□ -1.69
CLRN1P58418 AC060780.3-201ENST00000589464 80 ntBASIC4.52□□□□□ -1.69
CLRN1P58418 AC068790.5-201ENST00000602741 355 ntBASIC4.52□□□□□ -1.69
CLRN1P58418 AC073091.2-201ENST00000603205 907 ntBASIC4.52□□□□□ -1.69
CLRN1P58418 BNIP3P9-201ENST00000603714 553 ntBASIC4.52□□□□□ -1.69
CLRN1P58418 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.52□□□□□ -1.69
CLRN1P58418 AL355472.4-201ENST00000610233 626 ntBASIC4.52□□□□□ -1.69
CLRN1P58418 RPSAP73-201ENST00000614820 330 ntBASIC4.52□□□□□ -1.69
CLRN1P58418 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.52□□□□□ -1.69
CLRN1P58418 AP006248.2-201ENST00000623309 592 ntBASIC4.52□□□□□ -1.69
CLRN1P58418 AC091953.2-201ENST00000623979 160 ntBASIC4.52□□□□□ -1.69
CLRN1P58418 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CLRN1P58418 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.52□□□□□ -1.69
CLRN1P58418 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
CLRN1P58418 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLRN1P58418 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms