Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AL669831.4-202ENST00000590817 238 ntBASIC3.57□□□□□ -1.84
NKX2-1P43699 AC020914.6-201ENST00000594327 272 ntBASIC3.57□□□□□ -1.84
NKX2-1P43699 AP000811.1-201ENST00000603803 651 ntBASIC3.57□□□□□ -1.84
NKX2-1P43699 AC105129.3-201ENST00000605455 485 ntBASIC3.57□□□□□ -1.84
NKX2-1P43699 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.57□□□□□ -1.84
NKX2-1P43699 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
NKX2-1P43699 AL356121.2-201ENST00000624715 780 ntBASIC3.57□□□□□ -1.84
NKX2-1P43699 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.57□□□□□ -1.84
NKX2-1P43699 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.57□□□□□ -1.84
NKX2-1P43699 FP325313.1-201ENST00000638228 703 ntBASIC3.57□□□□□ -1.84
NKX2-1P43699 MFSD8-242ENST00000641690 4199 ntBASIC3.57□□□□□ -1.84
NKX2-1P43699 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NKX2-1P43699 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.56□□□□□ -1.84
NKX2-1P43699 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.56□□□□□ -1.84
NKX2-1P43699 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
NKX2-1P43699 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NKX2-1P43699 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NKX2-1P43699 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NKX2-1P43699 OR4G11P-202ENST00000642116 1414 ntBASIC3.56□□□□□ -1.84
NKX2-1P43699 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NKX2-1P43699 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NKX2-1P43699 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NKX2-1P43699 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.56□□□□□ -1.84
NKX2-1P43699 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NKX2-1P43699 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NKX2-1P43699 AL645927.1-201ENST00000396783 406 ntBASIC3.56□□□□□ -1.84
NKX2-1P43699 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.56□□□□□ -1.84
NKX2-1P43699 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.56□□□□□ -1.84
NKX2-1P43699 RSU1P3-201ENST00000412878 835 ntBASIC3.56□□□□□ -1.84
NKX2-1P43699 COX6B1P1-201ENST00000415962 213 ntBASIC3.56□□□□□ -1.84
NKX2-1P43699 AL161631.1-201ENST00000417933 486 ntBASIC3.56□□□□□ -1.84
NKX2-1P43699 FNDC3CP-201ENST00000420795 1155 ntBASIC3.56□□□□□ -1.84
NKX2-1P43699 AC011233.1-201ENST00000422812 283 ntBASIC3.56□□□□□ -1.84
NKX2-1P43699 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC3.56□□□□□ -1.84
NKX2-1P43699 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC3.56□□□□□ -1.84
NKX2-1P43699 AL049745.1-201ENST00000433953 286 ntBASIC3.56□□□□□ -1.84
NKX2-1P43699 UBE2V1P3-201ENST00000439651 417 ntBASIC3.56□□□□□ -1.84
NKX2-1P43699 RPL23AP93-201ENST00000440847 484 ntBASIC3.56□□□□□ -1.84
NKX2-1P43699 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.56□□□□□ -1.84
NKX2-1P43699 AC073387.1-201ENST00000453261 709 ntBASIC3.56□□□□□ -1.84
NKX2-1P43699 SUMO2P2-201ENST00000456482 255 ntBASIC3.56□□□□□ -1.84
NKX2-1P43699 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.56□□□□□ -1.84
NKX2-1P43699 RPS20P24-201ENST00000457473 361 ntBASIC3.56□□□□□ -1.84
NKX2-1P43699 snoU109.4-201ENST00000458953 143 ntBASIC3.56□□□□□ -1.84
NKX2-1P43699 RPS27AP17-201ENST00000463344 455 ntBASIC3.56□□□□□ -1.84
NKX2-1P43699 AC097493.1-201ENST00000463958 372 ntBASIC3.56□□□□□ -1.84
NKX2-1P43699 PLGLA-201ENST00000465668 449 ntBASIC3.56□□□□□ -1.84
NKX2-1P43699 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
NKX2-1P43699 SYPL1P1-201ENST00000473622 768 ntBASIC3.56□□□□□ -1.84
NKX2-1P43699 AC093270.2-201ENST00000486157 792 ntBASIC3.56□□□□□ -1.84
NKX2-1P43699 AC004453.1-201ENST00000487895 408 ntBASIC3.56□□□□□ -1.84
NKX2-1P43699 AC008638.1-201ENST00000506035 866 ntBASIC3.56□□□□□ -1.84
NKX2-1P43699 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
NKX2-1P43699 OR5M14P-201ENST00000506803 618 ntBASIC3.56□□□□□ -1.84
NKX2-1P43699 AC109458.1-201ENST00000508858 316 ntBASIC3.56□□□□□ -1.84
NKX2-1P43699 VWA8P1-201ENST00000510889 176 ntBASIC3.56□□□□□ -1.84
NKX2-1P43699 UBE2Q2P10-201ENST00000514854 900 ntBASIC3.56□□□□□ -1.84
NKX2-1P43699 RNA5SP216-201ENST00000516111 123 ntBASIC3.56□□□□□ -1.84
NKX2-1P43699 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.56□□□□□ -1.84
NKX2-1P43699 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC3.56□□□□□ -1.84
NKX2-1P43699 OR7K1P-201ENST00000546439 926 ntBASIC3.56□□□□□ -1.84
NKX2-1P43699 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.56□□□□□ -1.84
NKX2-1P43699 PCNPP1-201ENST00000552501 511 ntBASIC3.56□□□□□ -1.84
NKX2-1P43699 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.56□□□□□ -1.84
NKX2-1P43699 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.56□□□□□ -1.84
NKX2-1P43699 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.56□□□□□ -1.84
NKX2-1P43699 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.56□□□□□ -1.84
NKX2-1P43699 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC3.56□□□□□ -1.84
NKX2-1P43699 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.56□□□□□ -1.84
NKX2-1P43699 AL445222.1-201ENST00000607259 628 ntBASIC3.56□□□□□ -1.84
NKX2-1P43699 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.56□□□□□ -1.84
NKX2-1P43699 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.56□□□□□ -1.84
NKX2-1P43699 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.56□□□□□ -1.84
NKX2-1P43699 AC004825.2-201ENST00000616634 455 ntBASIC3.56□□□□□ -1.84
NKX2-1P43699 RMST_9.1-201ENST00000619945 193 ntBASIC3.56□□□□□ -1.84
NKX2-1P43699 AC018445.2-201ENST00000622987 260 ntBASIC3.56□□□□□ -1.84
NKX2-1P43699 AC008785.1-201ENST00000624475 456 ntBASIC3.56□□□□□ -1.84
NKX2-1P43699 AC006065.6-201ENST00000625201 545 ntBASIC3.56□□□□□ -1.84
NKX2-1P43699 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.56□□□□□ -1.84
NKX2-1P43699 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.56□□□□□ -1.84
NKX2-1P43699 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.56□□□□□ -1.84
NKX2-1P43699 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.56□□□□□ -1.84
NKX2-1P43699 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
NKX2-1P43699 AC097714.1-201ENST00000511272 1647 ntBASIC3.55□□□□□ -1.84
NKX2-1P43699 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NKX2-1P43699 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
NKX2-1P43699 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
NKX2-1P43699 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
NKX2-1P43699 AL356473.1-201ENST00000406203 1408 ntBASIC3.55□□□□□ -1.84
NKX2-1P43699 AC018555.1-201ENST00000567548 1980 ntBASIC3.55□□□□□ -1.84
NKX2-1P43699 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NKX2-1P43699 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
NKX2-1P43699 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
NKX2-1P43699 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.55□□□□□ -1.84
NKX2-1P43699 ATP5F1P4-201ENST00000397288 746 ntBASIC3.55□□□□□ -1.84
NKX2-1P43699 AL031577.2-201ENST00000404133 280 ntBASIC3.55□□□□□ -1.84
NKX2-1P43699 RNA5SP239-201ENST00000410218 129 ntBASIC3.55□□□□□ -1.84
NKX2-1P43699 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC3.55□□□□□ -1.84
NKX2-1P43699 MORF4L1P6-201ENST00000418771 268 ntBASIC3.55□□□□□ -1.84
NKX2-1P43699 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms