Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 AL589765.3-201ENST00000446084 462 ntBASIC3.6□□□□□ -1.83
COL18A1P39060 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.6□□□□□ -1.83
COL18A1P39060 RN7SKP60-201ENST00000516985 239 ntBASIC3.6□□□□□ -1.83
COL18A1P39060 AC015911.5-201ENST00000587076 451 ntBASIC3.6□□□□□ -1.83
COL18A1P39060 DNAJC19P3-201ENST00000594491 331 ntBASIC3.6□□□□□ -1.83
COL18A1P39060 AC092593.1-201ENST00000515413 1815 ntBASIC3.6□□□□□ -1.83
COL18A1P39060 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
COL18A1P39060 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
COL18A1P39060 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.59□□□□□ -1.83
COL18A1P39060 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.83
COL18A1P39060 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
COL18A1P39060 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
COL18A1P39060 RN7SKP192-201ENST00000411291 327 ntBASIC3.59□□□□□ -1.83
COL18A1P39060 AC245054.2-201ENST00000415639 319 ntBASIC3.59□□□□□ -1.83
COL18A1P39060 RPL7P10-201ENST00000417407 739 ntBASIC3.59□□□□□ -1.83
COL18A1P39060 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.59□□□□□ -1.83
COL18A1P39060 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.59□□□□□ -1.83
COL18A1P39060 DDX18P3-201ENST00000404856 2007 ntBASIC3.59□□□□□ -1.83
COL18A1P39060 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
COL18A1P39060 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
COL18A1P39060 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.59□□□□□ -1.84
COL18A1P39060 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
COL18A1P39060 RNU6-304P-201ENST00000364855 107 ntBASIC3.58□□□□□ -1.84
COL18A1P39060 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
COL18A1P39060 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.58□□□□□ -1.84
COL18A1P39060 AC106901.1-201ENST00000425086 698 ntBASIC3.58□□□□□ -1.84
COL18A1P39060 AC005189.1-201ENST00000431286 310 ntBASIC3.58□□□□□ -1.84
COL18A1P39060 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.58□□□□□ -1.84
COL18A1P39060 RPL23AP31-201ENST00000456160 467 ntBASIC3.58□□□□□ -1.84
COL18A1P39060 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.58□□□□□ -1.84
COL18A1P39060 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.58□□□□□ -1.84
COL18A1P39060 EEF1A1P37-201ENST00000522748 715 ntBASIC3.58□□□□□ -1.84
COL18A1P39060 OR5AK3P-201ENST00000527486 1297 ntBASIC3.58□□□□□ -1.84
COL18A1P39060 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.58□□□□□ -1.84
COL18A1P39060 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC3.58□□□□□ -1.84
COL18A1P39060 AL713998.2-201ENST00000604538 1198 ntBASIC3.58□□□□□ -1.84
COL18A1P39060 MAPK10-373ENST00000641983 6772 ntBASIC3.58□□□□□ -1.84
COL18A1P39060 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
COL18A1P39060 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
COL18A1P39060 AC008725.1-201ENST00000605123 2263 ntBASIC3.58□□□□□ -1.84
COL18A1P39060 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL18A1P39060 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
COL18A1P39060 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL18A1P39060 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
COL18A1P39060 RPS4XP7-201ENST00000406274 780 ntBASIC3.58□□□□□ -1.84
COL18A1P39060 SMC4P1-201ENST00000414479 527 ntBASIC3.58□□□□□ -1.84
COL18A1P39060 YPEL5P1-201ENST00000419731 367 ntBASIC3.58□□□□□ -1.84
COL18A1P39060 AC099063.2-201ENST00000446360 662 ntBASIC3.58□□□□□ -1.84
COL18A1P39060 AC004801.2-202ENST00000463559 283 ntBASIC3.58□□□□□ -1.84
COL18A1P39060 AC006445.2-201ENST00000510061 472 ntBASIC3.58□□□□□ -1.84
COL18A1P39060 FAM60DP-201ENST00000524174 632 ntBASIC3.58□□□□□ -1.84
COL18A1P39060 UBTFL10-201ENST00000528532 562 ntBASIC3.58□□□□□ -1.84
COL18A1P39060 AP002770.2-201ENST00000543613 532 ntBASIC3.58□□□□□ -1.84
COL18A1P39060 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.58□□□□□ -1.84
COL18A1P39060 AP000919.1-202ENST00000581139 1264 ntBASIC3.58□□□□□ -1.84
COL18A1P39060 AC090312.2-201ENST00000582687 378 ntBASIC3.58□□□□□ -1.84
COL18A1P39060 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.58□□□□□ -1.84
COL18A1P39060 CTSLP2-204ENST00000629029 392 ntBASIC3.58□□□□□ -1.84
COL18A1P39060 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.58□□□□□ -1.84
COL18A1P39060 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.58□□□□□ -1.84
COL18A1P39060 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC3.57□□□□□ -1.84
COL18A1P39060 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
COL18A1P39060 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
COL18A1P39060 GCNT6-201ENST00000379591 934 ntBASIC3.57□□□□□ -1.84
COL18A1P39060 MIR518C-201ENST00000384822 101 ntBASIC3.57□□□□□ -1.84
COL18A1P39060 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.57□□□□□ -1.84
COL18A1P39060 UQCRHP3-201ENST00000451503 251 ntBASIC3.57□□□□□ -1.84
COL18A1P39060 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.57□□□□□ -1.84
COL18A1P39060 AP002371.1-201ENST00000463604 433 ntBASIC3.57□□□□□ -1.84
COL18A1P39060 OR9N1P-201ENST00000491296 333 ntBASIC3.57□□□□□ -1.84
COL18A1P39060 KATNBL1P4-201ENST00000503545 918 ntBASIC3.57□□□□□ -1.84
COL18A1P39060 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC3.57□□□□□ -1.84
COL18A1P39060 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.57□□□□□ -1.84
COL18A1P39060 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.57□□□□□ -1.84
COL18A1P39060 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.57□□□□□ -1.84
COL18A1P39060 AC098826.3-201ENST00000603823 466 ntBASIC3.57□□□□□ -1.84
COL18A1P39060 AC096586.2-201ENST00000610260 441 ntBASIC3.57□□□□□ -1.84
COL18A1P39060 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
COL18A1P39060 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
COL18A1P39060 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
COL18A1P39060 RLIMP2-201ENST00000427891 1563 ntBASIC3.56□□□□□ -1.84
COL18A1P39060 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
COL18A1P39060 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.56□□□□□ -1.84
COL18A1P39060 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
COL18A1P39060 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC3.56□□□□□ -1.84
COL18A1P39060 MIR26A1-201ENST00000362205 77 ntBASIC3.56□□□□□ -1.84
COL18A1P39060 AL589994.1-201ENST00000404962 340 ntBASIC3.56□□□□□ -1.84
COL18A1P39060 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.56□□□□□ -1.84
COL18A1P39060 CBX1P4-201ENST00000439415 457 ntBASIC3.56□□□□□ -1.84
COL18A1P39060 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.56□□□□□ -1.84
COL18A1P39060 CACYBPP2-201ENST00000453625 678 ntBASIC3.56□□□□□ -1.84
COL18A1P39060 SNRPGP5-201ENST00000456003 220 ntBASIC3.56□□□□□ -1.84
COL18A1P39060 RPL21P41-201ENST00000459863 264 ntBASIC3.56□□□□□ -1.84
COL18A1P39060 TRBV8-1-201ENST00000481590 279 ntBASIC3.56□□□□□ -1.84
COL18A1P39060 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
COL18A1P39060 AC096725.1-201ENST00000514266 313 ntBASIC3.56□□□□□ -1.84
COL18A1P39060 Y_RNA.673-201ENST00000516306 88 ntBASIC3.56□□□□□ -1.84
COL18A1P39060 RN7SKP283-201ENST00000517197 270 ntBASIC3.56□□□□□ -1.84
COL18A1P39060 RPL7P20-201ENST00000520308 745 ntBASIC3.56□□□□□ -1.84
COL18A1P39060 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms