Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HOXC12P31275 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HOXC12P31275 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HOXC12P31275 RNU6-845P-201ENST00000362578 103 ntBASIC5.07□□□□□ -1.6
HOXC12P31275 RNU5E-8P-201ENST00000363502 116 ntBASIC5.07□□□□□ -1.6
HOXC12P31275 RNA5SP500-201ENST00000364486 119 ntBASIC5.07□□□□□ -1.6
HOXC12P31275 RN7SKP124-201ENST00000364730 341 ntBASIC5.07□□□□□ -1.6
HOXC12P31275 RNU1-59P-201ENST00000364829 162 ntBASIC5.07□□□□□ -1.6
HOXC12P31275 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
HOXC12P31275 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HOXC12P31275 RNU6-171P-201ENST00000384354 107 ntBASIC5.07□□□□□ -1.6
HOXC12P31275 HMGB1P20-201ENST00000402555 677 ntBASIC5.07□□□□□ -1.6
HOXC12P31275 MIR1286-201ENST00000408112 78 ntBASIC5.07□□□□□ -1.6
HOXC12P31275 MRPL53P1-201ENST00000414323 319 ntBASIC5.07□□□□□ -1.6
HOXC12P31275 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HOXC12P31275 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.07□□□□□ -1.6
HOXC12P31275 AC008850.1-201ENST00000427546 362 ntBASIC5.07□□□□□ -1.6
HOXC12P31275 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.07□□□□□ -1.6
HOXC12P31275 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HOXC12P31275 CFL1P1-202ENST00000432948 411 ntBASIC5.07□□□□□ -1.6
HOXC12P31275 AC096775.1-201ENST00000437724 448 ntBASIC5.07□□□□□ -1.6
HOXC12P31275 FTH1P1-201ENST00000437933 532 ntBASIC5.07□□□□□ -1.6
HOXC12P31275 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.07□□□□□ -1.6
HOXC12P31275 BX276092.4-201ENST00000452056 248 ntBASIC5.07□□□□□ -1.6
HOXC12P31275 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.07□□□□□ -1.6
HOXC12P31275 AL049714.1-201ENST00000466686 347 ntBASIC5.07□□□□□ -1.6
HOXC12P31275 SLC25A51P1-201ENST00000468432 871 ntBASIC5.07□□□□□ -1.6
HOXC12P31275 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.07□□□□□ -1.6
HOXC12P31275 RN7SL727P-201ENST00000482164 296 ntBASIC5.07□□□□□ -1.6
HOXC12P31275 RN7SL184P-201ENST00000488308 297 ntBASIC5.07□□□□□ -1.6
HOXC12P31275 AC020893.1-201ENST00000502452 580 ntBASIC5.07□□□□□ -1.6
HOXC12P31275 NDUFA5P12-201ENST00000503796 343 ntBASIC5.07□□□□□ -1.6
HOXC12P31275 GAPDHP56-201ENST00000506031 988 ntBASIC5.07□□□□□ -1.6
HOXC12P31275 AC006499.3-201ENST00000506077 748 ntBASIC5.07□□□□□ -1.6
HOXC12P31275 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.07□□□□□ -1.6
HOXC12P31275 AC111000.3-201ENST00000508057 576 ntBASIC5.07□□□□□ -1.6
HOXC12P31275 AC105384.2-201ENST00000508433 640 ntBASIC5.07□□□□□ -1.6
HOXC12P31275 PCBP2P3-201ENST00000509726 843 ntBASIC5.07□□□□□ -1.6
HOXC12P31275 MTND6P2-201ENST00000512226 524 ntBASIC5.07□□□□□ -1.6
HOXC12P31275 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC5.07□□□□□ -1.6
HOXC12P31275 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.07□□□□□ -1.6
HOXC12P31275 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.07□□□□□ -1.6
HOXC12P31275 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.07□□□□□ -1.6
HOXC12P31275 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.07□□□□□ -1.6
HOXC12P31275 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.07□□□□□ -1.6
HOXC12P31275 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.07□□□□□ -1.6
HOXC12P31275 AC018809.2-201ENST00000602436 3823 ntBASIC5.07□□□□□ -1.6
HOXC12P31275 IMMP1LP3-201ENST00000604197 224 ntBASIC5.07□□□□□ -1.6
HOXC12P31275 AC245517.5-201ENST00000611529 162 ntBASIC5.07□□□□□ -1.6
HOXC12P31275 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC5.07□□□□□ -1.6
HOXC12P31275 AC100810.6-201ENST00000638068 285 ntBASIC5.07□□□□□ -1.6
HOXC12P31275 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.07□□□□□ -1.6
HOXC12P31275 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.07□□□□□ -1.6
HOXC12P31275 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HOXC12P31275 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
HOXC12P31275 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HOXC12P31275 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HOXC12P31275 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HOXC12P31275 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC5.07□□□□□ -1.6
HOXC12P31275 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.07□□□□□ -1.6
HOXC12P31275 AC008758.3-201ENST00000507003 1829 ntBASIC5.07□□□□□ -1.6
HOXC12P31275 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HOXC12P31275 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
HOXC12P31275 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
HOXC12P31275 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
HOXC12P31275 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HOXC12P31275 Y_RNA.157-201ENST00000363638 102 ntBASIC5.06□□□□□ -1.6
HOXC12P31275 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
HOXC12P31275 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HOXC12P31275 AL354719.1-201ENST00000406535 843 ntBASIC5.06□□□□□ -1.6
HOXC12P31275 RNU2-62P-201ENST00000410868 191 ntBASIC5.06□□□□□ -1.6
HOXC12P31275 HMGN1P24-201ENST00000412282 298 ntBASIC5.06□□□□□ -1.6
HOXC12P31275 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC5.06□□□□□ -1.6
HOXC12P31275 AL662874.1-201ENST00000426065 230 ntBASIC5.06□□□□□ -1.6
HOXC12P31275 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.06□□□□□ -1.6
HOXC12P31275 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.06□□□□□ -1.6
HOXC12P31275 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.06□□□□□ -1.6
HOXC12P31275 AL138799.3-201ENST00000438968 350 ntBASIC5.06□□□□□ -1.6
HOXC12P31275 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.06□□□□□ -1.6
HOXC12P31275 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.06□□□□□ -1.6
HOXC12P31275 CBWD4P-201ENST00000445695 655 ntBASIC5.06□□□□□ -1.6
HOXC12P31275 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.06□□□□□ -1.6
HOXC12P31275 NANOGP10-201ENST00000453325 895 ntBASIC5.06□□□□□ -1.6
HOXC12P31275 AC011225.1-201ENST00000457751 369 ntBASIC5.06□□□□□ -1.6
HOXC12P31275 RPS27AP17-201ENST00000463344 455 ntBASIC5.06□□□□□ -1.6
HOXC12P31275 AC063943.1-201ENST00000465434 453 ntBASIC5.06□□□□□ -1.6
HOXC12P31275 AC006512.1-201ENST00000468816 291 ntBASIC5.06□□□□□ -1.6
HOXC12P31275 AC087385.1-201ENST00000475062 312 ntBASIC5.06□□□□□ -1.6
HOXC12P31275 AC078785.3-201ENST00000476607 425 ntBASIC5.06□□□□□ -1.6
HOXC12P31275 RN7SL826P-201ENST00000479724 288 ntBASIC5.06□□□□□ -1.6
HOXC12P31275 AC233702.1-201ENST00000482905 502 ntBASIC5.06□□□□□ -1.6
HOXC12P31275 MTCO3P44-201ENST00000510977 541 ntBASIC5.06□□□□□ -1.6
HOXC12P31275 RN7SKP277-201ENST00000516895 283 ntBASIC5.06□□□□□ -1.6
HOXC12P31275 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC5.06□□□□□ -1.6
HOXC12P31275 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.06□□□□□ -1.6
HOXC12P31275 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.06□□□□□ -1.6
HOXC12P31275 OR10G5P-201ENST00000532733 358 ntBASIC5.06□□□□□ -1.6
HOXC12P31275 AC243972.3-201ENST00000539655 198 ntBASIC5.06□□□□□ -1.6
HOXC12P31275 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.06□□□□□ -1.6
HOXC12P31275 AC125611.2-201ENST00000551907 647 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms