Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AL732372.2-207ENST00000445840 183 ntBASIC6.01□□□□□ -1.45
LIG1P18858 AC105399.1-202ENST00000447303 205 ntBASIC6.01□□□□□ -1.45
LIG1P18858 SEPT14P2-201ENST00000453405 183 ntBASIC6.01□□□□□ -1.45
LIG1P18858 HMGB1P4-201ENST00000455362 567 ntBASIC6.01□□□□□ -1.45
LIG1P18858 RNU6-1218P-201ENST00000458990 108 ntBASIC6.01□□□□□ -1.45
LIG1P18858 RPL23AP12-201ENST00000467573 473 ntBASIC6.01□□□□□ -1.45
LIG1P18858 OR2AO1P-201ENST00000476497 403 ntBASIC6.01□□□□□ -1.45
LIG1P18858 CREM-238ENST00000488741 651 ntTSL 2 BASIC6.01□□□□□ -1.45
LIG1P18858 AC013356.1-201ENST00000489027 564 ntBASIC6.01□□□□□ -1.45
LIG1P18858 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.01□□□□□ -1.45
LIG1P18858 ACTR3BP4-201ENST00000503033 1244 ntBASIC6.01□□□□□ -1.45
LIG1P18858 SEPT14P4-201ENST00000513445 186 ntBASIC6.01□□□□□ -1.45
LIG1P18858 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC6.01□□□□□ -1.45
LIG1P18858 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.01□□□□□ -1.45
LIG1P18858 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
LIG1P18858 IGKV2-36-201ENST00000519999 223 ntBASIC6.01□□□□□ -1.45
LIG1P18858 AC022360.1-201ENST00000521058 340 ntBASIC6.01□□□□□ -1.45
LIG1P18858 FO082796.1-201ENST00000523795 183 ntBASIC6.01□□□□□ -1.45
LIG1P18858 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.01□□□□□ -1.45
LIG1P18858 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
LIG1P18858 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.01□□□□□ -1.45
LIG1P18858 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC6.01□□□□□ -1.45
LIG1P18858 AC015917.1-201ENST00000579654 510 ntBASIC6.01□□□□□ -1.45
LIG1P18858 MIR3671-201ENST00000580455 88 ntBASIC6.01□□□□□ -1.45
LIG1P18858 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.01□□□□□ -1.45
LIG1P18858 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.01□□□□□ -1.45
LIG1P18858 COX6CP4-201ENST00000605798 228 ntBASIC6.01□□□□□ -1.45
LIG1P18858 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC6.01□□□□□ -1.45
LIG1P18858 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
LIG1P18858 AC068722.2-201ENST00000618734 544 ntBASIC6.01□□□□□ -1.45
LIG1P18858 AC090527.3-201ENST00000619041 548 ntBASIC6.01□□□□□ -1.45
LIG1P18858 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC6.01□□□□□ -1.45
LIG1P18858 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
LIG1P18858 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
LIG1P18858 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
LIG1P18858 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
LIG1P18858 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
LIG1P18858 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
LIG1P18858 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC6□□□□□ -1.45
LIG1P18858 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6□□□□□ -1.45
LIG1P18858 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
LIG1P18858 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LIG1P18858 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
LIG1P18858 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
LIG1P18858 MAPK10-304ENST00000641341 3984 ntBASIC6□□□□□ -1.45
LIG1P18858 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
LIG1P18858 CKAP2P1-201ENST00000555477 2049 ntBASIC6□□□□□ -1.45
LIG1P18858 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
LIG1P18858 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC6□□□□□ -1.45
LIG1P18858 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LIG1P18858 MAX-203ENST00000341653 330 ntTSL 2 BASIC6□□□□□ -1.45
LIG1P18858 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC6□□□□□ -1.45
LIG1P18858 MIR133B-201ENST00000362210 119 ntBASIC6□□□□□ -1.45
LIG1P18858 Y_RNA.157-201ENST00000363638 102 ntBASIC6□□□□□ -1.45
LIG1P18858 RNA5SP335-201ENST00000363817 110 ntBASIC6□□□□□ -1.45
LIG1P18858 RNU1-39P-201ENST00000383897 165 ntBASIC6□□□□□ -1.45
LIG1P18858 RNU6-146P-201ENST00000384602 108 ntBASIC6□□□□□ -1.45
LIG1P18858 RNU2-8P-201ENST00000410727 190 ntBASIC6□□□□□ -1.45
LIG1P18858 AL359704.1-201ENST00000411586 781 ntBASIC6□□□□□ -1.45
LIG1P18858 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC6□□□□□ -1.45
LIG1P18858 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6□□□□□ -1.45
LIG1P18858 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC6□□□□□ -1.45
LIG1P18858 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC6□□□□□ -1.45
LIG1P18858 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC6□□□□□ -1.45
LIG1P18858 RPS4XP14-201ENST00000493072 781 ntBASIC6□□□□□ -1.45
LIG1P18858 AC093278.1-201ENST00000494700 600 ntBASIC6□□□□□ -1.45
LIG1P18858 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6□□□□□ -1.45
LIG1P18858 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC6□□□□□ -1.45
LIG1P18858 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6□□□□□ -1.45
LIG1P18858 RNU6-941P-201ENST00000516346 108 ntBASIC6□□□□□ -1.45
LIG1P18858 LY96-202ENST00000518893 430 ntTSL 3 BASIC6□□□□□ -1.45
LIG1P18858 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6□□□□□ -1.45
LIG1P18858 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6□□□□□ -1.45
LIG1P18858 AC008127.2-201ENST00000549925 1075 ntBASIC6□□□□□ -1.45
LIG1P18858 AL389895.1-201ENST00000554127 252 ntBASIC6□□□□□ -1.45
LIG1P18858 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC6□□□□□ -1.45
LIG1P18858 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC6□□□□□ -1.45
LIG1P18858 MIR1269B-201ENST00000580405 75 ntBASIC6□□□□□ -1.45
LIG1P18858 MIR3176-201ENST00000582210 90 ntBASIC6□□□□□ -1.45
LIG1P18858 MIR3936-201ENST00000584304 110 ntBASIC6□□□□□ -1.45
LIG1P18858 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
LIG1P18858 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC6□□□□□ -1.45
LIG1P18858 AL365204.3-201ENST00000612448 685 ntBASIC6□□□□□ -1.45
LIG1P18858 AC037198.3-201ENST00000616754 526 ntBASIC6□□□□□ -1.45
LIG1P18858 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
LIG1P18858 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC6□□□□□ -1.45
LIG1P18858 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC6□□□□□ -1.45
LIG1P18858 CDRT1-208ENST00000630868 794 ntBASIC6□□□□□ -1.45
LIG1P18858 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6□□□□□ -1.45
LIG1P18858 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LIG1P18858 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC6□□□□□ -1.45
LIG1P18858 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC6□□□□□ -1.45
LIG1P18858 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6□□□□□ -1.45
LIG1P18858 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LIG1P18858 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6□□□□□ -1.45
LIG1P18858 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
LIG1P18858 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC6□□□□□ -1.45
LIG1P18858 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LIG1P18858 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
LIG1P18858 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms