Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.33□□□□□ -1.88
NCK1P16333 GLRXP1-201ENST00000423261 334 ntBASIC3.33□□□□□ -1.88
NCK1P16333 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NCK1P16333 DEFB130D-201ENST00000426866 237 ntBASIC3.33□□□□□ -1.88
NCK1P16333 AL591419.1-201ENST00000427423 339 ntBASIC3.33□□□□□ -1.88
NCK1P16333 AL512637.2-201ENST00000431287 1256 ntBASIC3.33□□□□□ -1.88
NCK1P16333 VDAC1P3-201ENST00000434069 851 ntBASIC3.33□□□□□ -1.88
NCK1P16333 AL590762.3-201ENST00000436372 640 ntBASIC3.33□□□□□ -1.88
NCK1P16333 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.33□□□□□ -1.88
NCK1P16333 AL357552.1-201ENST00000445254 415 ntBASIC3.33□□□□□ -1.88
NCK1P16333 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.33□□□□□ -1.88
NCK1P16333 RPL12P26-201ENST00000452430 487 ntBASIC3.33□□□□□ -1.88
NCK1P16333 NPM1P13-201ENST00000452663 865 ntBASIC3.33□□□□□ -1.88
NCK1P16333 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.33□□□□□ -1.88
NCK1P16333 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.33□□□□□ -1.88
NCK1P16333 AC010618.1-201ENST00000469924 477 ntBASIC3.33□□□□□ -1.88
NCK1P16333 AC087312.1-201ENST00000471411 480 ntBASIC3.33□□□□□ -1.88
NCK1P16333 RPS4XP13-201ENST00000483219 789 ntBASIC3.33□□□□□ -1.88
NCK1P16333 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.33□□□□□ -1.88
NCK1P16333 RNA5SP315-201ENST00000516340 116 ntBASIC3.33□□□□□ -1.88
NCK1P16333 RNA5SP312-201ENST00000517068 116 ntBASIC3.33□□□□□ -1.88
NCK1P16333 AC034205.1-201ENST00000520621 638 ntBASIC3.33□□□□□ -1.88
NCK1P16333 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.33□□□□□ -1.88
NCK1P16333 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.33□□□□□ -1.88
NCK1P16333 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.33□□□□□ -1.88
NCK1P16333 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.33□□□□□ -1.88
NCK1P16333 AL590282.1-201ENST00000610379 1136 ntBASIC3.33□□□□□ -1.88
NCK1P16333 MIR378J-201ENST00000611988 109 ntBASIC3.33□□□□□ -1.88
NCK1P16333 AL512506.1-201ENST00000613918 449 ntBASIC3.33□□□□□ -1.88
NCK1P16333 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.33□□□□□ -1.88
NCK1P16333 AC006963.1-201ENST00000624003 1052 ntBASIC3.33□□□□□ -1.88
NCK1P16333 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.33□□□□□ -1.88
NCK1P16333 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.33□□□□□ -1.88
NCK1P16333 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NCK1P16333 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NCK1P16333 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.33□□□□□ -1.88
NCK1P16333 AC058791.1-201ENST00000608412 3198 ntBASIC3.33□□□□□ -1.88
NCK1P16333 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.32□□□□□ -1.88
NCK1P16333 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NCK1P16333 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.32□□□□□ -1.88
NCK1P16333 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
NCK1P16333 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NCK1P16333 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
NCK1P16333 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NCK1P16333 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.32□□□□□ -1.88
NCK1P16333 RNU6-354P-201ENST00000383862 107 ntBASIC3.32□□□□□ -1.88
NCK1P16333 RNU6-610P-201ENST00000384264 107 ntBASIC3.32□□□□□ -1.88
NCK1P16333 MIR30B-201ENST00000384850 88 ntBASIC3.32□□□□□ -1.88
NCK1P16333 AL583834.1-201ENST00000406943 343 ntBASIC3.32□□□□□ -1.88
NCK1P16333 AC017079.2-201ENST00000416102 485 ntBASIC3.32□□□□□ -1.88
NCK1P16333 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.32□□□□□ -1.88
NCK1P16333 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.32□□□□□ -1.88
NCK1P16333 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.32□□□□□ -1.88
NCK1P16333 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.32□□□□□ -1.88
NCK1P16333 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.32□□□□□ -1.88
NCK1P16333 SEPT14P24-201ENST00000447236 180 ntBASIC3.32□□□□□ -1.88
NCK1P16333 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.32□□□□□ -1.88
NCK1P16333 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.32□□□□□ -1.88
NCK1P16333 snoU13.24-201ENST00000458998 104 ntBASIC3.32□□□□□ -1.88
NCK1P16333 NAP1L1P3-201ENST00000462291 880 ntBASIC3.32□□□□□ -1.88
NCK1P16333 AC091959.2-201ENST00000477363 321 ntBASIC3.32□□□□□ -1.88
NCK1P16333 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.32□□□□□ -1.88
NCK1P16333 AL049830.2-201ENST00000480072 201 ntBASIC3.32□□□□□ -1.88
NCK1P16333 AC068587.1-201ENST00000483613 781 ntBASIC3.32□□□□□ -1.88
NCK1P16333 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.32□□□□□ -1.88
NCK1P16333 AC109635.4-202ENST00000531666 412 ntBASIC3.32□□□□□ -1.88
NCK1P16333 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.32□□□□□ -1.88
NCK1P16333 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.32□□□□□ -1.88
NCK1P16333 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.32□□□□□ -1.88
NCK1P16333 AC093510.2-201ENST00000562820 896 ntBASIC3.32□□□□□ -1.88
NCK1P16333 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.32□□□□□ -1.88
NCK1P16333 MTCO1P40-201ENST00000574371 625 ntBASIC3.32□□□□□ -1.88
NCK1P16333 AC087499.8-201ENST00000578406 226 ntBASIC3.32□□□□□ -1.88
NCK1P16333 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
NCK1P16333 AL020997.3-201ENST00000602843 359 ntBASIC3.32□□□□□ -1.88
NCK1P16333 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.32□□□□□ -1.88
NCK1P16333 AC009948.4-201ENST00000604692 675 ntBASIC3.32□□□□□ -1.88
NCK1P16333 RNU1-30P-201ENST00000606575 163 ntBASIC3.32□□□□□ -1.88
NCK1P16333 AL354976.1-201ENST00000613843 387 ntBASIC3.32□□□□□ -1.88
NCK1P16333 AC006338.2-201ENST00000616864 791 ntBASIC3.32□□□□□ -1.88
NCK1P16333 AC098679.5-201ENST00000624394 571 ntBASIC3.32□□□□□ -1.88
NCK1P16333 AL590396.4-201ENST00000636779 956 ntBASIC3.32□□□□□ -1.88
NCK1P16333 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NCK1P16333 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NCK1P16333 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.32□□□□□ -1.88
NCK1P16333 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
NCK1P16333 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.32□□□□□ -1.88
NCK1P16333 AC004972.1-201ENST00000623934 2209 ntBASIC3.32□□□□□ -1.88
NCK1P16333 AC002546.1-201ENST00000588041 2504 ntBASIC3.32□□□□□ -1.88
NCK1P16333 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
NCK1P16333 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
NCK1P16333 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NCK1P16333 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.31□□□□□ -1.88
NCK1P16333 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NCK1P16333 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NCK1P16333 RNU1-75P-201ENST00000347264 129 ntBASIC3.31□□□□□ -1.88
NCK1P16333 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
NCK1P16333 RNU6-374P-201ENST00000364146 108 ntBASIC3.31□□□□□ -1.88
NCK1P16333 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.31□□□□□ -1.88
NCK1P16333 RNU6-730P-201ENST00000383954 104 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms