Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 B3GNT2P1-201ENST00000434960 952 ntBASIC4.6□□□□□ -1.67
CFTRP13569 SRIP1-201ENST00000489235 288 ntBASIC4.6□□□□□ -1.67
CFTRP13569 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.6□□□□□ -1.67
CFTRP13569 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.6□□□□□ -1.67
CFTRP13569 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
CFTRP13569 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CFTRP13569 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CFTRP13569 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CFTRP13569 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
CFTRP13569 AC107081.3-201ENST00000612715 2034 ntBASIC4.59□□□□□ -1.67
CFTRP13569 RNU6-304P-201ENST00000364855 107 ntBASIC4.59□□□□□ -1.67
CFTRP13569 RPS7P13-201ENST00000413955 498 ntBASIC4.59□□□□□ -1.67
CFTRP13569 IFNA11P-201ENST00000446352 526 ntBASIC4.59□□□□□ -1.67
CFTRP13569 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CFTRP13569 AC006539.3-201ENST00000454258 129 ntBASIC4.59□□□□□ -1.67
CFTRP13569 AC009039.2-201ENST00000624524 529 ntBASIC4.59□□□□□ -1.67
CFTRP13569 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
CFTRP13569 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
CFTRP13569 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
CFTRP13569 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CFTRP13569 AC008264.2-201ENST00000610193 3731 ntBASIC4.58□□□□□ -1.68
CFTRP13569 AL590290.1-201ENST00000405336 380 ntBASIC4.58□□□□□ -1.68
CFTRP13569 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CFTRP13569 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.58□□□□□ -1.68
CFTRP13569 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CFTRP13569 CYCSP20-201ENST00000473154 315 ntBASIC4.58□□□□□ -1.68
CFTRP13569 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.58□□□□□ -1.68
CFTRP13569 AC079228.1-201ENST00000624774 1049 ntBASIC4.58□□□□□ -1.68
CFTRP13569 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CFTRP13569 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.57□□□□□ -1.68
CFTRP13569 RNU4-53P-201ENST00000410828 140 ntBASIC4.57□□□□□ -1.68
CFTRP13569 AL139415.2-201ENST00000431968 163 ntBASIC4.57□□□□□ -1.68
CFTRP13569 AL590103.1-201ENST00000434488 307 ntBASIC4.57□□□□□ -1.68
CFTRP13569 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.57□□□□□ -1.68
CFTRP13569 MIR4648-201ENST00000580107 72 ntBASIC4.57□□□□□ -1.68
CFTRP13569 DDX18P3-201ENST00000404856 2007 ntBASIC4.57□□□□□ -1.68
CFTRP13569 MIR1289-2-201ENST00000408360 111 ntBASIC4.56□□□□□ -1.68
CFTRP13569 RNA5SP425-201ENST00000410336 112 ntBASIC4.56□□□□□ -1.68
CFTRP13569 AC017078.1-201ENST00000416146 368 ntBASIC4.56□□□□□ -1.68
CFTRP13569 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.56□□□□□ -1.68
CFTRP13569 MTCO1P51-201ENST00000427672 1060 ntBASIC4.56□□□□□ -1.68
CFTRP13569 RPS26P40-201ENST00000435209 294 ntBASIC4.56□□□□□ -1.68
CFTRP13569 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.56□□□□□ -1.68
CFTRP13569 RPL23AP22-201ENST00000437556 453 ntBASIC4.56□□□□□ -1.68
CFTRP13569 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.56□□□□□ -1.68
CFTRP13569 OR10D4P-201ENST00000525892 951 ntBASIC4.56□□□□□ -1.68
CFTRP13569 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.56□□□□□ -1.68
CFTRP13569 AL442163.2-201ENST00000553912 710 ntBASIC4.56□□□□□ -1.68
CFTRP13569 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.56□□□□□ -1.68
CFTRP13569 OOSP1P2-201ENST00000579644 351 ntBASIC4.56□□□□□ -1.68
CFTRP13569 AC078899.3-201ENST00000599065 212 ntBASIC4.56□□□□□ -1.68
CFTRP13569 AC090115.4-201ENST00000609970 188 ntBASIC4.56□□□□□ -1.68
CFTRP13569 AC022031.1-201ENST00000585985 2593 ntBASIC4.56□□□□□ -1.68
CFTRP13569 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CFTRP13569 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CFTRP13569 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.56□□□□□ -1.68
CFTRP13569 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CFTRP13569 AC092881.1-201ENST00000638218 2733 ntBASIC4.56□□□□□ -1.68
CFTRP13569 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CFTRP13569 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.56□□□□□ -1.68
CFTRP13569 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CFTRP13569 GCNT6-201ENST00000379591 934 ntBASIC4.56□□□□□ -1.68
CFTRP13569 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CFTRP13569 RHEBP3-201ENST00000411920 351 ntBASIC4.56□□□□□ -1.68
CFTRP13569 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CFTRP13569 AC006020.1-201ENST00000420179 1854 ntBASIC4.56□□□□□ -1.68
CFTRP13569 AP000936.3-201ENST00000438127 255 ntBASIC4.56□□□□□ -1.68
CFTRP13569 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.56□□□□□ -1.68
CFTRP13569 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.56□□□□□ -1.68
CFTRP13569 HPRT1P3-201ENST00000539521 576 ntBASIC4.56□□□□□ -1.68
CFTRP13569 AC015911.5-201ENST00000587076 451 ntBASIC4.56□□□□□ -1.68
CFTRP13569 ZNF861P-201ENST00000588126 639 ntBASIC4.56□□□□□ -1.68
CFTRP13569 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.56□□□□□ -1.68
CFTRP13569 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CFTRP13569 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.55□□□□□ -1.68
CFTRP13569 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CFTRP13569 AL079342.1-201ENST00000401460 267 ntBASIC4.55□□□□□ -1.68
CFTRP13569 AC245054.2-201ENST00000415639 319 ntBASIC4.55□□□□□ -1.68
CFTRP13569 RPS12P23-201ENST00000419579 400 ntBASIC4.55□□□□□ -1.68
CFTRP13569 AC104058.1-201ENST00000448028 297 ntBASIC4.55□□□□□ -1.68
CFTRP13569 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.55□□□□□ -1.68
CFTRP13569 AC113430.1-201ENST00000506872 718 ntBASIC4.55□□□□□ -1.68
CFTRP13569 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.55□□□□□ -1.68
CFTRP13569 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CFTRP13569 DEFB122-202ENST00000569013 197 ntBASIC4.55□□□□□ -1.68
CFTRP13569 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.55□□□□□ -1.68
CFTRP13569 AC025811.1-201ENST00000604312 472 ntBASIC4.55□□□□□ -1.68
CFTRP13569 MTCO1P7-201ENST00000419523 1542 ntBASIC4.54□□□□□ -1.68
CFTRP13569 SNORD62.1-201ENST00000362541 86 ntBASIC4.54□□□□□ -1.68
CFTRP13569 RNA5SP107-201ENST00000411358 122 ntBASIC4.54□□□□□ -1.68
CFTRP13569 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.54□□□□□ -1.68
CFTRP13569 AL365396.1-201ENST00000430854 671 ntBASIC4.54□□□□□ -1.68
CFTRP13569 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.54□□□□□ -1.68
CFTRP13569 UQCRHP3-201ENST00000451503 251 ntBASIC4.54□□□□□ -1.68
CFTRP13569 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.54□□□□□ -1.68
CFTRP13569 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.54□□□□□ -1.68
CFTRP13569 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.54□□□□□ -1.68
CFTRP13569 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.54□□□□□ -1.68
CFTRP13569 DLEU2_6.1-201ENST00000610536 112 ntBASIC4.54□□□□□ -1.68
CFTRP13569 AL158196.1-201ENST00000616786 434 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms