Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AL445529.1-201ENST00000398713 389 ntBASIC3.15□□□□□ -1.91
COL11A1P12107 RNA5SP107-201ENST00000411358 122 ntBASIC3.15□□□□□ -1.91
COL11A1P12107 AC063976.3-201ENST00000426849 329 ntBASIC3.15□□□□□ -1.91
COL11A1P12107 RPL21P112-201ENST00000434403 463 ntBASIC3.15□□□□□ -1.91
COL11A1P12107 AC125238.1-201ENST00000448842 249 ntBASIC3.15□□□□□ -1.91
COL11A1P12107 RN7SKP60-201ENST00000516985 239 ntBASIC3.15□□□□□ -1.91
COL11A1P12107 AC245166.1-201ENST00000521012 253 ntBASIC3.15□□□□□ -1.91
COL11A1P12107 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.15□□□□□ -1.91
COL11A1P12107 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.15□□□□□ -1.91
COL11A1P12107 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.15□□□□□ -1.91
COL11A1P12107 OR6R2P-201ENST00000609216 300 ntBASIC3.15□□□□□ -1.91
COL11A1P12107 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
COL11A1P12107 AL049780.3-201ENST00000624612 1583 ntBASIC3.15□□□□□ -1.91
COL11A1P12107 AC093831.2-201ENST00000624393 3427 ntBASIC3.15□□□□□ -1.91
COL11A1P12107 AC007342.7-201ENST00000624610 2337 ntBASIC3.15□□□□□ -1.91
COL11A1P12107 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
COL11A1P12107 RAD1P1-201ENST00000231383 813 ntBASIC3.14□□□□□ -1.91
COL11A1P12107 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
COL11A1P12107 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.14□□□□□ -1.91
COL11A1P12107 AC106901.1-201ENST00000425086 698 ntBASIC3.14□□□□□ -1.91
COL11A1P12107 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.14□□□□□ -1.91
COL11A1P12107 HMGB1P25-201ENST00000468402 607 ntBASIC3.14□□□□□ -1.91
COL11A1P12107 AC078817.1-201ENST00000492623 435 ntBASIC3.14□□□□□ -1.91
COL11A1P12107 AL035404.1-201ENST00000497982 568 ntBASIC3.14□□□□□ -1.91
COL11A1P12107 YWHAEP4-201ENST00000505390 198 ntBASIC3.14□□□□□ -1.91
COL11A1P12107 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.14□□□□□ -1.91
COL11A1P12107 RN7SKP5-201ENST00000517045 272 ntBASIC3.14□□□□□ -1.91
COL11A1P12107 AF186190.1-201ENST00000517470 480 ntBASIC3.14□□□□□ -1.91
COL11A1P12107 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.14□□□□□ -1.91
COL11A1P12107 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC3.14□□□□□ -1.91
COL11A1P12107 AP002812.4-201ENST00000532139 286 ntBASIC3.14□□□□□ -1.91
COL11A1P12107 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC3.14□□□□□ -1.91
COL11A1P12107 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
COL11A1P12107 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
COL11A1P12107 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
COL11A1P12107 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.14□□□□□ -1.91
COL11A1P12107 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.14□□□□□ -1.91
COL11A1P12107 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
COL11A1P12107 YPEL5P1-201ENST00000419731 367 ntBASIC3.14□□□□□ -1.91
COL11A1P12107 Z93242.1-201ENST00000427102 353 ntBASIC3.14□□□□□ -1.91
COL11A1P12107 TOMM20P4-201ENST00000427861 435 ntBASIC3.14□□□□□ -1.91
COL11A1P12107 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.14□□□□□ -1.91
COL11A1P12107 NIPA2P2-201ENST00000496376 1083 ntBASIC3.14□□□□□ -1.91
COL11A1P12107 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC3.14□□□□□ -1.91
COL11A1P12107 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.14□□□□□ -1.91
COL11A1P12107 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.14□□□□□ -1.91
COL11A1P12107 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.14□□□□□ -1.91
COL11A1P12107 AC026790.2-201ENST00000606282 430 ntBASIC3.14□□□□□ -1.91
COL11A1P12107 AL096803.3-201ENST00000609032 532 ntBASIC3.14□□□□□ -1.91
COL11A1P12107 AC068722.2-201ENST00000618734 544 ntBASIC3.14□□□□□ -1.91
COL11A1P12107 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.14□□□□□ -1.91
COL11A1P12107 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.14□□□□□ -1.91
COL11A1P12107 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
COL11A1P12107 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
COL11A1P12107 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
COL11A1P12107 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
COL11A1P12107 MIR196B-201ENST00000384852 84 ntBASIC3.13□□□□□ -1.91
COL11A1P12107 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
COL11A1P12107 SEPT7P2-202ENST00000398921 823 ntBASIC3.13□□□□□ -1.91
COL11A1P12107 AC009963.1-201ENST00000417265 157 ntBASIC3.13□□□□□ -1.91
COL11A1P12107 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.13□□□□□ -1.91
COL11A1P12107 AC007563.3-201ENST00000433233 371 ntBASIC3.13□□□□□ -1.91
COL11A1P12107 RPL21P41-201ENST00000459863 264 ntBASIC3.13□□□□□ -1.91
COL11A1P12107 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.13□□□□□ -1.91
COL11A1P12107 AL157394.1-201ENST00000562983 1224 ntBASIC3.13□□□□□ -1.91
COL11A1P12107 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC3.13□□□□□ -1.91
COL11A1P12107 AC009039.2-201ENST00000624524 529 ntBASIC3.13□□□□□ -1.91
COL11A1P12107 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
COL11A1P12107 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
COL11A1P12107 RNA5SP68-201ENST00000363885 119 ntBASIC3.12□□□□□ -1.91
COL11A1P12107 AL034379.1-201ENST00000423216 253 ntBASIC3.12□□□□□ -1.91
COL11A1P12107 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.12□□□□□ -1.91
COL11A1P12107 RN7SL75P-201ENST00000461926 281 ntBASIC3.12□□□□□ -1.91
COL11A1P12107 RPL23AP14-201ENST00000468281 468 ntBASIC3.12□□□□□ -1.91
COL11A1P12107 TRBV12-1-201ENST00000479785 344 ntBASIC3.12□□□□□ -1.91
COL11A1P12107 OR9N1P-201ENST00000491296 333 ntBASIC3.12□□□□□ -1.91
COL11A1P12107 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.12□□□□□ -1.91
COL11A1P12107 RNA5SP282-201ENST00000516355 108 ntBASIC3.12□□□□□ -1.91
COL11A1P12107 AC068657.1-201ENST00000520807 306 ntBASIC3.12□□□□□ -1.91
COL11A1P12107 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.12□□□□□ -1.91
COL11A1P12107 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.12□□□□□ -1.91
COL11A1P12107 BNIP3P10-201ENST00000605360 577 ntBASIC3.12□□□□□ -1.91
COL11A1P12107 AL365361.1-201ENST00000566942 3481 ntBASIC3.12□□□□□ -1.91
COL11A1P12107 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
COL11A1P12107 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC3.12□□□□□ -1.91
COL11A1P12107 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
COL11A1P12107 AC092593.1-201ENST00000515413 1815 ntBASIC3.12□□□□□ -1.91
COL11A1P12107 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
COL11A1P12107 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.12□□□□□ -1.91
COL11A1P12107 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
COL11A1P12107 RPL31P1-201ENST00000398116 372 ntBASIC3.12□□□□□ -1.91
COL11A1P12107 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.12□□□□□ -1.91
COL11A1P12107 OR2AS1P-201ENST00000427827 319 ntBASIC3.12□□□□□ -1.91
COL11A1P12107 AL450263.2-201ENST00000439400 589 ntBASIC3.12□□□□□ -1.91
COL11A1P12107 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.12□□□□□ -1.91
COL11A1P12107 AL513124.1-201ENST00000450410 614 ntBASIC3.12□□□□□ -1.91
COL11A1P12107 RPS27P29-201ENST00000463110 252 ntBASIC3.12□□□□□ -1.91
COL11A1P12107 RNA5SP380-201ENST00000517190 98 ntBASIC3.12□□□□□ -1.91
COL11A1P12107 RFPL1S-203ENST00000539579 330 ntBASIC3.12□□□□□ -1.91
COL11A1P12107 SERPINE4P-201ENST00000554978 281 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms