Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.37□□□□□ -1.55
HMGB1P09429 PTMAP5-201ENST00000393073 333 ntBASIC5.37□□□□□ -1.55
HMGB1P09429 AC097374.1-203ENST00000400783 485 ntBASIC5.37□□□□□ -1.55
HMGB1P09429 AL136372.1-201ENST00000403060 228 ntBASIC5.37□□□□□ -1.55
HMGB1P09429 AC009237.10-201ENST00000414112 510 ntBASIC5.37□□□□□ -1.55
HMGB1P09429 AL592310.1-201ENST00000414330 671 ntBASIC5.37□□□□□ -1.55
HMGB1P09429 ELOCP9-201ENST00000418624 239 ntBASIC5.37□□□□□ -1.55
HMGB1P09429 HMGB3P5-201ENST00000428894 612 ntBASIC5.37□□□□□ -1.55
HMGB1P09429 NANOGP6-201ENST00000429190 847 ntBASIC5.37□□□□□ -1.55
HMGB1P09429 ZYG11AP1-201ENST00000430329 837 ntBASIC5.37□□□□□ -1.55
HMGB1P09429 AC024082.2-201ENST00000434771 238 ntBASIC5.37□□□□□ -1.55
HMGB1P09429 MTCO2P20-201ENST00000437339 673 ntBASIC5.37□□□□□ -1.55
HMGB1P09429 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC5.37□□□□□ -1.55
HMGB1P09429 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.37□□□□□ -1.55
HMGB1P09429 RN7SL41P-201ENST00000476144 297 ntBASIC5.37□□□□□ -1.55
HMGB1P09429 RN7SL817P-201ENST00000480777 288 ntBASIC5.37□□□□□ -1.55
HMGB1P09429 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.37□□□□□ -1.55
HMGB1P09429 IGKV2-23-201ENST00000518729 323 ntBASIC5.37□□□□□ -1.55
HMGB1P09429 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.37□□□□□ -1.55
HMGB1P09429 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.37□□□□□ -1.55
HMGB1P09429 AC006518.1-201ENST00000541449 943 ntBASIC5.37□□□□□ -1.55
HMGB1P09429 MTND4P33-201ENST00000556706 766 ntBASIC5.37□□□□□ -1.55
HMGB1P09429 MIR4270-201ENST00000581799 70 ntBASIC5.37□□□□□ -1.55
HMGB1P09429 MIR4480-201ENST00000582492 71 ntBASIC5.37□□□□□ -1.55
HMGB1P09429 AC092354.2-201ENST00000607786 514 ntBASIC5.37□□□□□ -1.55
HMGB1P09429 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.37□□□□□ -1.55
HMGB1P09429 AC006213.4-201ENST00000616184 634 ntBASIC5.37□□□□□ -1.55
HMGB1P09429 AP000484.1-201ENST00000620067 1252 ntBASIC5.37□□□□□ -1.55
HMGB1P09429 AL445264.1-201ENST00000621719 171 ntBASIC5.37□□□□□ -1.55
HMGB1P09429 AC091953.3-201ENST00000623220 236 ntBASIC5.37□□□□□ -1.55
HMGB1P09429 AC068787.1-201ENST00000623908 691 ntBASIC5.37□□□□□ -1.55
HMGB1P09429 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.37□□□□□ -1.55
HMGB1P09429 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
HMGB1P09429 AC138915.3-201ENST00000562908 1389 ntBASIC5.37□□□□□ -1.55
HMGB1P09429 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.37□□□□□ -1.55
HMGB1P09429 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HMGB1P09429 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HMGB1P09429 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
HMGB1P09429 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HMGB1P09429 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.37□□□□□ -1.55
HMGB1P09429 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.36□□□□□ -1.55
HMGB1P09429 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.36□□□□□ -1.55
HMGB1P09429 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.36□□□□□ -1.55
HMGB1P09429 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HMGB1P09429 RNA5SP513-201ENST00000364648 118 ntBASIC5.36□□□□□ -1.55
HMGB1P09429 SNORA70F-201ENST00000384142 135 ntBASIC5.36□□□□□ -1.55
HMGB1P09429 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.36□□□□□ -1.55
HMGB1P09429 MTHFD2P2-201ENST00000407725 247 ntBASIC5.36□□□□□ -1.55
HMGB1P09429 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC5.36□□□□□ -1.55
HMGB1P09429 AL159169.1-201ENST00000421119 127 ntBASIC5.36□□□□□ -1.55
HMGB1P09429 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.36□□□□□ -1.55
HMGB1P09429 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC5.36□□□□□ -1.55
HMGB1P09429 SETP5-201ENST00000437270 562 ntBASIC5.36□□□□□ -1.55
HMGB1P09429 AC069285.2-201ENST00000440210 275 ntBASIC5.36□□□□□ -1.55
HMGB1P09429 MTND5P14-201ENST00000441481 1267 ntBASIC5.36□□□□□ -1.55
HMGB1P09429 RPL17P49-201ENST00000443728 411 ntBASIC5.36□□□□□ -1.55
HMGB1P09429 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.36□□□□□ -1.55
HMGB1P09429 AL606517.1-201ENST00000446914 387 ntBASIC5.36□□□□□ -1.55
HMGB1P09429 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.36□□□□□ -1.55
HMGB1P09429 AC012158.1-204ENST00000483430 465 ntBASIC5.36□□□□□ -1.55
HMGB1P09429 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.36□□□□□ -1.55
HMGB1P09429 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.36□□□□□ -1.55
HMGB1P09429 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC5.36□□□□□ -1.55
HMGB1P09429 AC103783.1-201ENST00000520506 373 ntBASIC5.36□□□□□ -1.55
HMGB1P09429 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HMGB1P09429 AC051619.2-201ENST00000559063 397 ntBASIC5.36□□□□□ -1.55
HMGB1P09429 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.36□□□□□ -1.55
HMGB1P09429 AC008759.1-201ENST00000589783 983 ntBASIC5.36□□□□□ -1.55
HMGB1P09429 AC022916.3-201ENST00000592961 742 ntBASIC5.36□□□□□ -1.55
HMGB1P09429 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC5.36□□□□□ -1.55
HMGB1P09429 AL109653.1-201ENST00000603091 248 ntBASIC5.36□□□□□ -1.55
HMGB1P09429 AP002360.3-201ENST00000607673 710 ntBASIC5.36□□□□□ -1.55
HMGB1P09429 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HMGB1P09429 TAB3P1-202ENST00000452645 1634 ntBASIC5.36□□□□□ -1.55
HMGB1P09429 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC5.36□□□□□ -1.55
HMGB1P09429 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC5.36□□□□□ -1.55
HMGB1P09429 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.36□□□□□ -1.55
HMGB1P09429 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC5.36□□□□□ -1.55
HMGB1P09429 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.36□□□□□ -1.55
HMGB1P09429 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.36□□□□□ -1.55
HMGB1P09429 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
HMGB1P09429 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMGB1P09429 AC139769.1-204ENST00000472297 1931 ntBASIC5.35□□□□□ -1.55
HMGB1P09429 MTCO1P9-201ENST00000505577 1534 ntBASIC5.35□□□□□ -1.55
HMGB1P09429 AL513185.3-201ENST00000433335 1300 ntBASIC5.35□□□□□ -1.55
HMGB1P09429 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HMGB1P09429 RNU6-289P-201ENST00000364093 107 ntBASIC5.35□□□□□ -1.55
HMGB1P09429 Y_RNA.234-201ENST00000364409 97 ntBASIC5.35□□□□□ -1.55
HMGB1P09429 RNU6-343P-201ENST00000364709 104 ntBASIC5.35□□□□□ -1.55
HMGB1P09429 MIR591-201ENST00000385290 95 ntBASIC5.35□□□□□ -1.55
HMGB1P09429 RN7SKP106-201ENST00000410832 272 ntBASIC5.35□□□□□ -1.55
HMGB1P09429 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.35□□□□□ -1.55
HMGB1P09429 MTCYBP38-201ENST00000417160 1123 ntBASIC5.35□□□□□ -1.55
HMGB1P09429 AC006960.1-201ENST00000419980 153 ntBASIC5.35□□□□□ -1.55
HMGB1P09429 BRWD1P3-201ENST00000428816 390 ntBASIC5.35□□□□□ -1.55
HMGB1P09429 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.35□□□□□ -1.55
HMGB1P09429 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.35□□□□□ -1.55
HMGB1P09429 AC006466.1-201ENST00000438721 289 ntBASIC5.35□□□□□ -1.55
HMGB1P09429 AC012671.1-201ENST00000451912 203 ntBASIC5.35□□□□□ -1.55
HMGB1P09429 AC108860.1-201ENST00000484521 383 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms