Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC013262.1-201ENST00000426710 252 ntBASIC2.69□□□□□ -1.98
HLA-DQA1P01909 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC2.69□□□□□ -1.98
HLA-DQA1P01909 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DQA1P01909 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.69□□□□□ -1.98
HLA-DQA1P01909 H2AFZP6-201ENST00000444403 394 ntBASIC2.69□□□□□ -1.98
HLA-DQA1P01909 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC2.69□□□□□ -1.98
HLA-DQA1P01909 AC114755.5-201ENST00000447760 831 ntBASIC2.69□□□□□ -1.98
HLA-DQA1P01909 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DQA1P01909 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC2.69□□□□□ -1.98
HLA-DQA1P01909 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC2.69□□□□□ -1.98
HLA-DQA1P01909 NF1P3-201ENST00000457709 450 ntBASIC2.69□□□□□ -1.98
HLA-DQA1P01909 AC084357.1-201ENST00000473404 255 ntBASIC2.69□□□□□ -1.98
HLA-DQA1P01909 RN7SL283P-201ENST00000489055 303 ntBASIC2.69□□□□□ -1.98
HLA-DQA1P01909 AC078817.1-201ENST00000492623 435 ntBASIC2.69□□□□□ -1.98
HLA-DQA1P01909 AC005726.1-201ENST00000494679 427 ntBASIC2.69□□□□□ -1.98
HLA-DQA1P01909 CEACAMP10-202ENST00000495431 496 ntBASIC2.69□□□□□ -1.98
HLA-DQA1P01909 RN7SKP122-201ENST00000515923 296 ntBASIC2.69□□□□□ -1.98
HLA-DQA1P01909 AC107934.2-201ENST00000518653 310 ntBASIC2.69□□□□□ -1.98
HLA-DQA1P01909 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.69□□□□□ -1.98
HLA-DQA1P01909 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC2.69□□□□□ -1.98
HLA-DQA1P01909 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.69□□□□□ -1.98
HLA-DQA1P01909 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.69□□□□□ -1.98
HLA-DQA1P01909 OR6C73P-201ENST00000546432 358 ntBASIC2.69□□□□□ -1.98
HLA-DQA1P01909 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC2.69□□□□□ -1.98
HLA-DQA1P01909 ZNF971P-201ENST00000562068 1249 ntBASIC2.69□□□□□ -1.98
HLA-DQA1P01909 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
HLA-DQA1P01909 ZNF192P1-203ENST00000565888 810 ntBASIC2.69□□□□□ -1.98
HLA-DQA1P01909 AC120057.2-201ENST00000571520 271 ntBASIC2.69□□□□□ -1.98
HLA-DQA1P01909 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC2.69□□□□□ -1.98
HLA-DQA1P01909 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.69□□□□□ -1.98
HLA-DQA1P01909 AC090666.1-201ENST00000578241 445 ntBASIC2.69□□□□□ -1.98
HLA-DQA1P01909 OR4G1P-201ENST00000588632 938 ntBASIC2.69□□□□□ -1.98
HLA-DQA1P01909 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.69□□□□□ -1.98
HLA-DQA1P01909 AC007566.2-201ENST00000603642 413 ntBASIC2.69□□□□□ -1.98
HLA-DQA1P01909 AL009028.1-201ENST00000604895 802 ntBASIC2.69□□□□□ -1.98
HLA-DQA1P01909 SNORA62.6-201ENST00000606322 83 ntBASIC2.69□□□□□ -1.98
HLA-DQA1P01909 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DQA1P01909 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DQA1P01909 AL357559.1-201ENST00000622228 274 ntBASIC2.69□□□□□ -1.98
HLA-DQA1P01909 AP000943.4-201ENST00000622912 357 ntBASIC2.69□□□□□ -1.98
HLA-DQA1P01909 AL732618.1-201ENST00000623251 301 ntBASIC2.69□□□□□ -1.98
HLA-DQA1P01909 AC098679.5-201ENST00000624394 571 ntBASIC2.69□□□□□ -1.98
HLA-DQA1P01909 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.69□□□□□ -1.98
HLA-DQA1P01909 AC138915.3-201ENST00000562908 1389 ntBASIC2.69□□□□□ -1.98
HLA-DQA1P01909 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC2.69□□□□□ -1.98
HLA-DQA1P01909 AC004972.1-201ENST00000623934 2209 ntBASIC2.69□□□□□ -1.98
HLA-DQA1P01909 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.69□□□□□ -1.98
HLA-DQA1P01909 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DQA1P01909 AC091152.2-201ENST00000591628 2569 ntBASIC2.68□□□□□ -1.98
HLA-DQA1P01909 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DQA1P01909 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DQA1P01909 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.68□□□□□ -1.98
HLA-DQA1P01909 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
HLA-DQA1P01909 FABP12P1-201ENST00000401911 322 ntBASIC2.68□□□□□ -1.98
HLA-DQA1P01909 AC007899.1-201ENST00000412776 775 ntBASIC2.68□□□□□ -1.98
HLA-DQA1P01909 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.68□□□□□ -1.98
HLA-DQA1P01909 RPS3AP9-201ENST00000417027 792 ntBASIC2.68□□□□□ -1.98
HLA-DQA1P01909 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DQA1P01909 Z97055.1-201ENST00000419730 712 ntBASIC2.68□□□□□ -1.98
HLA-DQA1P01909 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DQA1P01909 AC114973.1-201ENST00000429057 632 ntBASIC2.68□□□□□ -1.98
HLA-DQA1P01909 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DQA1P01909 RPS7P2-201ENST00000435134 607 ntBASIC2.68□□□□□ -1.98
HLA-DQA1P01909 AC009969.1-201ENST00000438726 172 ntBASIC2.68□□□□□ -1.98
HLA-DQA1P01909 RPS26P56-201ENST00000444468 240 ntBASIC2.68□□□□□ -1.98
HLA-DQA1P01909 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DQA1P01909 SEPT14P24-201ENST00000447236 180 ntBASIC2.68□□□□□ -1.98
HLA-DQA1P01909 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.68□□□□□ -1.98
HLA-DQA1P01909 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DQA1P01909 RPS7P7-201ENST00000463499 571 ntBASIC2.68□□□□□ -1.98
HLA-DQA1P01909 RPL7P19-201ENST00000469948 618 ntBASIC2.68□□□□□ -1.98
HLA-DQA1P01909 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC2.68□□□□□ -1.98
HLA-DQA1P01909 AC091860.1-201ENST00000505723 432 ntBASIC2.68□□□□□ -1.98
HLA-DQA1P01909 AC118282.2-201ENST00000508739 374 ntBASIC2.68□□□□□ -1.98
HLA-DQA1P01909 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DQA1P01909 MIR2276-201ENST00000516886 89 ntBASIC2.68□□□□□ -1.98
HLA-DQA1P01909 MIR2116-201ENST00000517221 80 ntBASIC2.68□□□□□ -1.98
HLA-DQA1P01909 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DQA1P01909 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.68□□□□□ -1.98
HLA-DQA1P01909 IGKV2D-19-201ENST00000523346 262 ntBASIC2.68□□□□□ -1.98
HLA-DQA1P01909 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.68□□□□□ -1.98
HLA-DQA1P01909 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.68□□□□□ -1.98
HLA-DQA1P01909 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DQA1P01909 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.68□□□□□ -1.98
HLA-DQA1P01909 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC2.68□□□□□ -1.98
HLA-DQA1P01909 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DQA1P01909 DUXAP6-201ENST00000553858 601 ntBASIC2.68□□□□□ -1.98
HLA-DQA1P01909 IGKV2OR2-8-201ENST00000558710 300 ntBASIC2.68□□□□□ -1.98
HLA-DQA1P01909 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DQA1P01909 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC2.68□□□□□ -1.98
HLA-DQA1P01909 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.68□□□□□ -1.98
HLA-DQA1P01909 AC005412.1-201ENST00000580812 1049 ntBASIC2.68□□□□□ -1.98
HLA-DQA1P01909 AC006116.5-201ENST00000591936 559 ntBASIC2.68□□□□□ -1.98
HLA-DQA1P01909 AL591034.3-201ENST00000605511 685 ntBASIC2.68□□□□□ -1.98
HLA-DQA1P01909 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.68□□□□□ -1.98
HLA-DQA1P01909 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC2.68□□□□□ -1.98
HLA-DQA1P01909 AC008759.3-201ENST00000613300 508 ntBASIC2.68□□□□□ -1.98
HLA-DQA1P01909 AC253576.2-201ENST00000618815 580 ntBASIC2.68□□□□□ -1.98
HLA-DQA1P01909 AC022079.2-201ENST00000619739 566 ntBASIC2.68□□□□□ -1.98
HLA-DQA1P01909 AC079684.1-201ENST00000621405 437 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms