Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 UBE2V2P1-201ENST00000434717 398 ntBASIC2.87□□□□□ -1.95
TNFP01375 RPS24P13-201ENST00000442520 397 ntBASIC2.87□□□□□ -1.95
TNFP01375 AL162389.1-201ENST00000449233 177 ntBASIC2.87□□□□□ -1.95
TNFP01375 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC2.87□□□□□ -1.95
TNFP01375 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC2.87□□□□□ -1.95
TNFP01375 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC2.87□□□□□ -1.95
TNFP01375 RNU2-58P-201ENST00000516403 183 ntBASIC2.87□□□□□ -1.95
TNFP01375 FAM60DP-201ENST00000524174 632 ntBASIC2.87□□□□□ -1.95
TNFP01375 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.87□□□□□ -1.95
TNFP01375 ABI1P1-201ENST00000603375 1120 ntBASIC2.87□□□□□ -1.95
TNFP01375 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.87□□□□□ -1.95
TNFP01375 AL356274.1-201ENST00000617064 410 ntBASIC2.87□□□□□ -1.95
TNFP01375 AL356490.1-201ENST00000623079 479 ntBASIC2.87□□□□□ -1.95
TNFP01375 AC138649.5-201ENST00000637456 137 ntBASIC2.87□□□□□ -1.95
TNFP01375 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
TNFP01375 AC138393.1-206ENST00000540997 1886 ntBASIC2.86□□□□□ -1.95
TNFP01375 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
TNFP01375 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
TNFP01375 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
TNFP01375 ARF4P3-201ENST00000397387 509 ntBASIC2.86□□□□□ -1.95
TNFP01375 RNU2-37P-201ENST00000410695 177 ntBASIC2.86□□□□□ -1.95
TNFP01375 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC2.86□□□□□ -1.95
TNFP01375 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC2.86□□□□□ -1.95
TNFP01375 RPS7P13-201ENST00000413955 498 ntBASIC2.86□□□□□ -1.95
TNFP01375 AL645937.1-202ENST00000421799 937 ntBASIC2.86□□□□□ -1.95
TNFP01375 RPL21P40-201ENST00000428586 483 ntBASIC2.86□□□□□ -1.95
TNFP01375 AC073508.1-201ENST00000428866 656 ntBASIC2.86□□□□□ -1.95
TNFP01375 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.86□□□□□ -1.95
TNFP01375 AC000041.1-201ENST00000439655 175 ntBASIC2.86□□□□□ -1.95
TNFP01375 AL135938.1-201ENST00000443141 297 ntBASIC2.86□□□□□ -1.95
TNFP01375 AC005002.1-201ENST00000447458 540 ntBASIC2.86□□□□□ -1.95
TNFP01375 SNORD108-201ENST00000459332 71 ntBASIC2.86□□□□□ -1.95
TNFP01375 RPS27P29-201ENST00000463110 252 ntBASIC2.86□□□□□ -1.95
TNFP01375 AC004924.1-201ENST00000480160 781 ntBASIC2.86□□□□□ -1.95
TNFP01375 RN7SL633P-201ENST00000488974 297 ntBASIC2.86□□□□□ -1.95
TNFP01375 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.86□□□□□ -1.95
TNFP01375 AC069306.1-201ENST00000507006 843 ntBASIC2.86□□□□□ -1.95
TNFP01375 MTCO1P30-201ENST00000515244 580 ntBASIC2.86□□□□□ -1.95
TNFP01375 AC010306.1-201ENST00000523223 1117 ntBASIC2.86□□□□□ -1.95
TNFP01375 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.86□□□□□ -1.95
TNFP01375 AL161713.1-201ENST00000555538 145 ntBASIC2.86□□□□□ -1.95
TNFP01375 GTF3AP2-201ENST00000557014 266 ntBASIC2.86□□□□□ -1.95
TNFP01375 AL845331.3-202ENST00000562856 261 ntBASIC2.86□□□□□ -1.95
TNFP01375 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.86□□□□□ -1.95
TNFP01375 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.86□□□□□ -1.95
TNFP01375 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC2.86□□□□□ -1.95
TNFP01375 AL589935.2-201ENST00000616471 1231 ntBASIC2.86□□□□□ -1.95
TNFP01375 AC007998.5-201ENST00000622938 237 ntBASIC2.86□□□□□ -1.95
TNFP01375 SNORA50A-202ENST00000629536 136 ntBASIC2.86□□□□□ -1.95
TNFP01375 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
TNFP01375 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
TNFP01375 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC2.86□□□□□ -1.95
TNFP01375 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.85□□□□□ -1.95
TNFP01375 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.85□□□□□ -1.95
TNFP01375 AC021755.1-201ENST00000559747 1447 ntBASIC2.85□□□□□ -1.95
TNFP01375 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.85□□□□□ -1.95
TNFP01375 Y_RNA.500-201ENST00000384466 111 ntBASIC2.85□□□□□ -1.95
TNFP01375 RNA5SP293-201ENST00000410527 113 ntBASIC2.85□□□□□ -1.95
TNFP01375 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.85□□□□□ -1.95
TNFP01375 BOLA3P4-201ENST00000418151 400 ntBASIC2.85□□□□□ -1.95
TNFP01375 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.85□□□□□ -1.95
TNFP01375 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.85□□□□□ -1.95
TNFP01375 KCTD9P5-201ENST00000504141 1170 ntBASIC2.85□□□□□ -1.95
TNFP01375 VN1R104P-201ENST00000505115 1009 ntBASIC2.85□□□□□ -1.95
TNFP01375 AC091826.1-201ENST00000514065 313 ntBASIC2.85□□□□□ -1.95
TNFP01375 RNU6-943P-201ENST00000516960 98 ntBASIC2.85□□□□□ -1.95
TNFP01375 COX6CP8-201ENST00000522620 226 ntBASIC2.85□□□□□ -1.95
TNFP01375 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.85□□□□□ -1.95
TNFP01375 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.85□□□□□ -1.95
TNFP01375 AC007566.2-201ENST00000603642 413 ntBASIC2.85□□□□□ -1.95
TNFP01375 AL365400.2-201ENST00000605604 902 ntBASIC2.85□□□□□ -1.95
TNFP01375 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC2.85□□□□□ -1.95
TNFP01375 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC2.85□□□□□ -1.95
TNFP01375 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.85□□□□□ -1.95
TNFP01375 AL645568.2-201ENST00000432815 1337 ntBASIC2.85□□□□□ -1.95
TNFP01375 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
TNFP01375 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
TNFP01375 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
TNFP01375 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
TNFP01375 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
TNFP01375 U3.6-201ENST00000363622 211 ntBASIC2.84□□□□□ -1.95
TNFP01375 AC245054.2-201ENST00000415639 319 ntBASIC2.84□□□□□ -1.95
TNFP01375 AC087499.2-201ENST00000432861 149 ntBASIC2.84□□□□□ -1.95
TNFP01375 AC236972.1-201ENST00000433225 199 ntBASIC2.84□□□□□ -1.95
TNFP01375 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.84□□□□□ -1.95
TNFP01375 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
TNFP01375 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
TNFP01375 AC021146.5-201ENST00000503544 545 ntBASIC2.84□□□□□ -1.95
TNFP01375 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.84□□□□□ -1.95
TNFP01375 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC2.84□□□□□ -1.95
TNFP01375 HIGD1AP13-201ENST00000509878 289 ntBASIC2.84□□□□□ -1.95
TNFP01375 RNU6-347P-201ENST00000516658 105 ntBASIC2.84□□□□□ -1.95
TNFP01375 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.84□□□□□ -1.95
TNFP01375 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.84□□□□□ -1.95
TNFP01375 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.84□□□□□ -1.95
TNFP01375 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.84□□□□□ -1.95
TNFP01375 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC2.84□□□□□ -1.95
TNFP01375 MTCO3P22-201ENST00000603219 784 ntBASIC2.84□□□□□ -1.95
TNFP01375 PSMA6P4-201ENST00000603247 718 ntBASIC2.84□□□□□ -1.95
TNFP01375 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms