Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.67□□□□□ -1.66
VPS4BO75351 SNRPEP7-201ENST00000438350 220 ntBASIC4.67□□□□□ -1.66
VPS4BO75351 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.67□□□□□ -1.66
VPS4BO75351 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.67□□□□□ -1.66
VPS4BO75351 AC026410.2-201ENST00000460281 156 ntBASIC4.67□□□□□ -1.66
VPS4BO75351 RPL23AP65-201ENST00000475608 468 ntBASIC4.67□□□□□ -1.66
VPS4BO75351 RN7SL319P-201ENST00000480656 221 ntBASIC4.67□□□□□ -1.66
VPS4BO75351 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.67□□□□□ -1.66
VPS4BO75351 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.67□□□□□ -1.66
VPS4BO75351 RNA5SP464-201ENST00000516251 108 ntBASIC4.67□□□□□ -1.66
VPS4BO75351 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.67□□□□□ -1.66
VPS4BO75351 AP002748.2-201ENST00000528671 348 ntBASIC4.67□□□□□ -1.66
VPS4BO75351 ZNF705CP-201ENST00000530515 889 ntBASIC4.67□□□□□ -1.66
VPS4BO75351 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.67□□□□□ -1.66
VPS4BO75351 RPL21P7-201ENST00000557463 483 ntBASIC4.67□□□□□ -1.66
VPS4BO75351 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.67□□□□□ -1.66
VPS4BO75351 AC087481.2-201ENST00000565492 330 ntBASIC4.67□□□□□ -1.66
VPS4BO75351 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.67□□□□□ -1.66
VPS4BO75351 MIR1254-2-201ENST00000579553 63 ntBASIC4.67□□□□□ -1.66
VPS4BO75351 MIR5096-201ENST00000583713 70 ntBASIC4.67□□□□□ -1.66
VPS4BO75351 AC110743.1-201ENST00000584870 478 ntBASIC4.67□□□□□ -1.66
VPS4BO75351 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.67□□□□□ -1.66
VPS4BO75351 BNIP3P11-201ENST00000603878 563 ntBASIC4.67□□□□□ -1.66
VPS4BO75351 RBM11P1-201ENST00000604951 799 ntBASIC4.67□□□□□ -1.66
VPS4BO75351 HSPE1P14-201ENST00000605812 302 ntBASIC4.67□□□□□ -1.66
VPS4BO75351 AC097468.3-201ENST00000607956 456 ntBASIC4.67□□□□□ -1.66
VPS4BO75351 AC108747.1-201ENST00000609508 535 ntBASIC4.67□□□□□ -1.66
VPS4BO75351 AC138749.5-201ENST00000611461 208 ntBASIC4.67□□□□□ -1.66
VPS4BO75351 AC027807.2-201ENST00000616099 408 ntBASIC4.67□□□□□ -1.66
VPS4BO75351 AC116165.2-201ENST00000616705 206 ntBASIC4.67□□□□□ -1.66
VPS4BO75351 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.67□□□□□ -1.66
VPS4BO75351 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.67□□□□□ -1.66
VPS4BO75351 AC027290.2-201ENST00000623210 18662 ntBASIC4.67□□□□□ -1.66
VPS4BO75351 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VPS4BO75351 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.66□□□□□ -1.66
VPS4BO75351 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS4BO75351 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS4BO75351 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS4BO75351 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS4BO75351 AC006378.2-201ENST00000623178 2476 ntBASIC4.66□□□□□ -1.66
VPS4BO75351 AC126755.2-208ENST00000327792 462 ntBASIC4.66□□□□□ -1.66
VPS4BO75351 AC138969.1-213ENST00000331436 462 ntBASIC4.66□□□□□ -1.66
VPS4BO75351 RNU5F-7P-201ENST00000363696 115 ntBASIC4.66□□□□□ -1.66
VPS4BO75351 RNA5SP428-201ENST00000365129 132 ntBASIC4.66□□□□□ -1.66
VPS4BO75351 RNU6-297P-201ENST00000384636 107 ntBASIC4.66□□□□□ -1.66
VPS4BO75351 ARF4P3-201ENST00000397387 509 ntBASIC4.66□□□□□ -1.66
VPS4BO75351 MIR921-201ENST00000401133 56 ntBASIC4.66□□□□□ -1.66
VPS4BO75351 AL121972.1-201ENST00000402023 252 ntBASIC4.66□□□□□ -1.66
VPS4BO75351 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
VPS4BO75351 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.66□□□□□ -1.66
VPS4BO75351 MIR1305-201ENST00000408300 86 ntBASIC4.66□□□□□ -1.66
VPS4BO75351 HMGN1P14-201ENST00000412459 517 ntBASIC4.66□□□□□ -1.66
VPS4BO75351 AC109780.2-201ENST00000413467 845 ntBASIC4.66□□□□□ -1.66
VPS4BO75351 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.66□□□□□ -1.66
VPS4BO75351 AC073136.2-201ENST00000417282 849 ntBASIC4.66□□□□□ -1.66
VPS4BO75351 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS4BO75351 AC069213.2-201ENST00000420238 366 ntBASIC4.66□□□□□ -1.66
VPS4BO75351 OFD1P18Y-201ENST00000420889 959 ntBASIC4.66□□□□□ -1.66
VPS4BO75351 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.66□□□□□ -1.66
VPS4BO75351 RPS26P47-201ENST00000427219 348 ntBASIC4.66□□□□□ -1.66
VPS4BO75351 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS4BO75351 OR2B8P-201ENST00000432841 938 ntBASIC4.66□□□□□ -1.66
VPS4BO75351 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS4BO75351 AL353597.2-202ENST00000434901 373 ntBASIC4.66□□□□□ -1.66
VPS4BO75351 PTMAP3-201ENST00000447474 330 ntBASIC4.66□□□□□ -1.66
VPS4BO75351 NPM1P49-201ENST00000448027 714 ntBASIC4.66□□□□□ -1.66
VPS4BO75351 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS4BO75351 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VPS4BO75351 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
VPS4BO75351 LARP1BP2-201ENST00000486594 519 ntBASIC4.66□□□□□ -1.66
VPS4BO75351 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS4BO75351 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS4BO75351 AC138853.1-201ENST00000503549 823 ntBASIC4.66□□□□□ -1.66
VPS4BO75351 TMEM251P1-201ENST00000503717 318 ntBASIC4.66□□□□□ -1.66
VPS4BO75351 BNIP3P41-201ENST00000503774 571 ntBASIC4.66□□□□□ -1.66
VPS4BO75351 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.66□□□□□ -1.66
VPS4BO75351 MTND5P4-201ENST00000514978 288 ntBASIC4.66□□□□□ -1.66
VPS4BO75351 MTND4LP26-201ENST00000518144 282 ntBASIC4.66□□□□□ -1.66
VPS4BO75351 AC134698.4-201ENST00000523451 826 ntBASIC4.66□□□□□ -1.66
VPS4BO75351 AC016957.1-201ENST00000534895 309 ntBASIC4.66□□□□□ -1.66
VPS4BO75351 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.66□□□□□ -1.66
VPS4BO75351 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
VPS4BO75351 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.66□□□□□ -1.66
VPS4BO75351 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS4BO75351 OR6C73P-201ENST00000546432 358 ntBASIC4.66□□□□□ -1.66
VPS4BO75351 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS4BO75351 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS4BO75351 AC009063.1-201ENST00000563342 702 ntBASIC4.66□□□□□ -1.66
VPS4BO75351 LARP7P2-201ENST00000575306 125 ntBASIC4.66□□□□□ -1.66
VPS4BO75351 MIR5697-201ENST00000578045 78 ntBASIC4.66□□□□□ -1.66
VPS4BO75351 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.66□□□□□ -1.66
VPS4BO75351 NF1P5-201ENST00000588287 448 ntBASIC4.66□□□□□ -1.66
VPS4BO75351 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS4BO75351 BCRP9-201ENST00000605312 388 ntBASIC4.66□□□□□ -1.66
VPS4BO75351 AL121932.1-201ENST00000605542 214 ntBASIC4.66□□□□□ -1.66
VPS4BO75351 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.66□□□□□ -1.66
VPS4BO75351 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.66□□□□□ -1.66
VPS4BO75351 MIR6864-201ENST00000617935 70 ntBASIC4.66□□□□□ -1.66
VPS4BO75351 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.66□□□□□ -1.66
VPS4BO75351 AL160394.1-201ENST00000624765 724 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms