Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.65□□□□□ -1.83
SDC3O75056 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.65□□□□□ -1.83
SDC3O75056 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.65□□□□□ -1.83
SDC3O75056 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.65□□□□□ -1.83
SDC3O75056 RPS15AP1-201ENST00000457423 391 ntBASIC3.65□□□□□ -1.83
SDC3O75056 snoU13.24-201ENST00000458998 104 ntBASIC3.65□□□□□ -1.83
SDC3O75056 PRDX3P4-201ENST00000470828 747 ntBASIC3.65□□□□□ -1.83
SDC3O75056 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.65□□□□□ -1.83
SDC3O75056 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.65□□□□□ -1.83
SDC3O75056 AC005726.1-201ENST00000494679 427 ntBASIC3.65□□□□□ -1.83
SDC3O75056 RPL31P61-201ENST00000496160 376 ntBASIC3.65□□□□□ -1.83
SDC3O75056 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SDC3O75056 AC026427.2-201ENST00000506228 536 ntBASIC3.65□□□□□ -1.83
SDC3O75056 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.65□□□□□ -1.83
SDC3O75056 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.65□□□□□ -1.83
SDC3O75056 TMEM248P1-201ENST00000510579 951 ntBASIC3.65□□□□□ -1.83
SDC3O75056 RN7SKP13-201ENST00000515933 244 ntBASIC3.65□□□□□ -1.83
SDC3O75056 SNORA74D-201ENST00000516404 141 ntBASIC3.65□□□□□ -1.83
SDC3O75056 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.65□□□□□ -1.83
SDC3O75056 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.65□□□□□ -1.83
SDC3O75056 OR4R3P-201ENST00000525084 838 ntBASIC3.65□□□□□ -1.83
SDC3O75056 AC006518.2-201ENST00000542513 940 ntBASIC3.65□□□□□ -1.83
SDC3O75056 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.65□□□□□ -1.83
SDC3O75056 AC004217.3-201ENST00000551552 878 ntBASIC3.65□□□□□ -1.83
SDC3O75056 AC037471.2-201ENST00000564941 598 ntBASIC3.65□□□□□ -1.83
SDC3O75056 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.65□□□□□ -1.83
SDC3O75056 AC023825.1-201ENST00000566704 1030 ntBASIC3.65□□□□□ -1.83
SDC3O75056 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.65□□□□□ -1.83
SDC3O75056 MTCO1P40-201ENST00000574371 625 ntBASIC3.65□□□□□ -1.83
SDC3O75056 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.65□□□□□ -1.83
SDC3O75056 AC010591.1-201ENST00000603941 649 ntBASIC3.65□□□□□ -1.83
SDC3O75056 AP002802.2-201ENST00000605877 235 ntBASIC3.65□□□□□ -1.83
SDC3O75056 RNU1-30P-201ENST00000606575 163 ntBASIC3.65□□□□□ -1.83
SDC3O75056 AP004247.3-201ENST00000608682 624 ntBASIC3.65□□□□□ -1.83
SDC3O75056 AC018645.2-201ENST00000609151 472 ntBASIC3.65□□□□□ -1.83
SDC3O75056 MIR7975-201ENST00000619350 68 ntBASIC3.65□□□□□ -1.83
SDC3O75056 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
SDC3O75056 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.65□□□□□ -1.83
SDC3O75056 AP003476.1-201ENST00000623984 516 ntBASIC3.65□□□□□ -1.83
SDC3O75056 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
SDC3O75056 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SDC3O75056 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.65□□□□□ -1.83
SDC3O75056 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SDC3O75056 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.65□□□□□ -1.83
SDC3O75056 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SDC3O75056 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SDC3O75056 MTND5P1-201ENST00000445440 1375 ntBASIC3.64□□□□□ -1.83
SDC3O75056 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
SDC3O75056 AC007823.1-201ENST00000569932 1566 ntBASIC3.64□□□□□ -1.83
SDC3O75056 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SDC3O75056 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.64□□□□□ -1.83
SDC3O75056 RNU6-444P-201ENST00000383988 108 ntBASIC3.64□□□□□ -1.83
SDC3O75056 PTMAP5-201ENST00000393073 333 ntBASIC3.64□□□□□ -1.83
SDC3O75056 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
SDC3O75056 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.64□□□□□ -1.83
SDC3O75056 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.64□□□□□ -1.83
SDC3O75056 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.64□□□□□ -1.83
SDC3O75056 AL138799.3-201ENST00000438968 350 ntBASIC3.64□□□□□ -1.83
SDC3O75056 AL592437.1-201ENST00000443781 492 ntBASIC3.64□□□□□ -1.83
SDC3O75056 RPL21P23-201ENST00000446654 460 ntBASIC3.64□□□□□ -1.83
SDC3O75056 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.64□□□□□ -1.83
SDC3O75056 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.64□□□□□ -1.83
SDC3O75056 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.64□□□□□ -1.83
SDC3O75056 ANP32BP2-201ENST00000454525 545 ntBASIC3.64□□□□□ -1.83
SDC3O75056 NCOR1P1-202ENST00000486162 291 ntBASIC3.64□□□□□ -1.83
SDC3O75056 WBP1LP4-201ENST00000505043 344 ntBASIC3.64□□□□□ -1.83
SDC3O75056 AC005798.1-201ENST00000513715 387 ntBASIC3.64□□□□□ -1.83
SDC3O75056 MTCO1P30-201ENST00000515244 580 ntBASIC3.64□□□□□ -1.83
SDC3O75056 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.64□□□□□ -1.83
SDC3O75056 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.64□□□□□ -1.83
SDC3O75056 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.64□□□□□ -1.83
SDC3O75056 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SDC3O75056 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.64□□□□□ -1.83
SDC3O75056 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.64□□□□□ -1.83
SDC3O75056 AC090666.1-201ENST00000578241 445 ntBASIC3.64□□□□□ -1.83
SDC3O75056 OR4G1P-201ENST00000588632 938 ntBASIC3.64□□□□□ -1.83
SDC3O75056 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.64□□□□□ -1.83
SDC3O75056 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.64□□□□□ -1.83
SDC3O75056 AC009948.4-201ENST00000604692 675 ntBASIC3.64□□□□□ -1.83
SDC3O75056 HSPE1P14-201ENST00000605812 302 ntBASIC3.64□□□□□ -1.83
SDC3O75056 AC124016.2-201ENST00000610058 665 ntBASIC3.64□□□□□ -1.83
SDC3O75056 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
SDC3O75056 AC243312.2-201ENST00000623340 601 ntBASIC3.64□□□□□ -1.83
SDC3O75056 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.64□□□□□ -1.83
SDC3O75056 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.64□□□□□ -1.83
SDC3O75056 BX649567.1-201ENST00000642071 1134 ntBASIC3.64□□□□□ -1.83
SDC3O75056 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SDC3O75056 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
SDC3O75056 AC090337.1-201ENST00000579651 2074 ntBASIC3.64□□□□□ -1.83
SDC3O75056 PRO1804-201ENST00000623780 2050 ntBASIC3.64□□□□□ -1.83
SDC3O75056 AC073346.2-201ENST00000624724 2058 ntBASIC3.64□□□□□ -1.83
SDC3O75056 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.63□□□□□ -1.83
SDC3O75056 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.63□□□□□ -1.83
SDC3O75056 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SDC3O75056 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.63□□□□□ -1.83
SDC3O75056 RNU6-1176P-201ENST00000390955 107 ntBASIC3.63□□□□□ -1.83
SDC3O75056 Z98941.1-201ENST00000407764 100 ntBASIC3.63□□□□□ -1.83
SDC3O75056 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.63□□□□□ -1.83
SDC3O75056 AL159169.1-201ENST00000421119 127 ntBASIC3.63□□□□□ -1.83
SDC3O75056 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms