Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 ARL2BPP6-201ENST00000512757 439 ntBASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 AL389895.1-201ENST00000554127 252 ntBASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 AL365503.1-201ENST00000605247 905 ntBASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 RNU1-30P-201ENST00000606575 163 ntBASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 AC013468.1-201ENST00000608680 598 ntBASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 AC073569.3-201ENST00000619055 682 ntBASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 AC068724.3-201ENST00000625906 87 ntBASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 SNORA50A-202ENST00000629536 136 ntBASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 MIR184-201ENST00000384962 84 ntBASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 RPS3AP26-201ENST00000398259 784 ntBASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 RN7SKP156-201ENST00000410308 342 ntBASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 SNORA57.3-201ENST00000411095 141 ntBASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 RPS7P15-201ENST00000415804 584 ntBASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 MRPS18BP2-201ENST00000434310 759 ntBASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 RPS15AP1-201ENST00000457423 391 ntBASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 snoU13.4-201ENST00000458916 104 ntBASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 RPS27P23-201ENST00000487608 251 ntBASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 TRAV15-201ENST00000556680 249 ntBASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 HSPE1P5-201ENST00000561489 272 ntBASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 MIR5685-201ENST00000579080 79 ntBASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 MIR4425-201ENST00000580572 84 ntBASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 MIR4697-201ENST00000582977 78 ntBASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 AC022916.3-201ENST00000592961 742 ntBASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 AC022146.1-201ENST00000595307 847 ntBASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 KATNBL1P1-201ENST00000605192 748 ntBASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 AL451086.1-201ENST00000605596 223 ntBASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 AC090912.3-201ENST00000609775 533 ntBASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 AL357559.1-201ENST00000622228 274 ntBASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 AL356490.1-201ENST00000623079 479 ntBASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 PWAR6-201ENST00000552334 4618 ntBASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
RHBDD3Q9Y3P4 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
RHBDD3Q9Y3P4 AC025263.3-201ENST00000622965 1396 ntBASIC3.15□□□□□ -1.9
RHBDD3Q9Y3P4 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 AP002088.1-201ENST00000382740 395 ntBASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 MIR525-201ENST00000384978 85 ntBASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 RPL7P60-201ENST00000397636 735 ntBASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 AL136116.1-201ENST00000403591 381 ntBASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 AC006989.1-201ENST00000427212 131 ntBASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 HIGD1AP11-201ENST00000438361 280 ntBASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 AC004022.1-201ENST00000447766 1066 ntBASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 AC007967.1-201ENST00000455422 1159 ntBASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 AL133162.1-201ENST00000463228 453 ntBASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 AC004801.2-202ENST00000463559 283 ntBASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 OR5H5P-201ENST00000503164 928 ntBASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 RN7SKP21-201ENST00000516503 220 ntBASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 AC023161.2-201ENST00000551218 780 ntBASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 AC095057.3-201ENST00000567102 1157 ntBASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 AC005412.1-201ENST00000580812 1049 ntBASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 MIR5187-201ENST00000583479 76 ntBASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 AC012254.4-201ENST00000588843 273 ntBASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RHBDD3Q9Y3P4 AC016542.1-201ENST00000608259 493 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms