Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC6.9□□□□□ -1.31
SHROOM4Q9ULL8 RNU6-1151P-201ENST00000384684 107 ntBASIC6.9□□□□□ -1.31
SHROOM4Q9ULL8 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
SHROOM4Q9ULL8 OR51A3P-201ENST00000413596 924 ntBASIC6.9□□□□□ -1.31
SHROOM4Q9ULL8 PAICSP7-201ENST00000419829 962 ntBASIC6.9□□□□□ -1.31
SHROOM4Q9ULL8 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SHROOM4Q9ULL8 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC6.9□□□□□ -1.31
SHROOM4Q9ULL8 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC6.9□□□□□ -1.31
SHROOM4Q9ULL8 AC091860.1-201ENST00000505723 432 ntBASIC6.9□□□□□ -1.31
SHROOM4Q9ULL8 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC6.9□□□□□ -1.31
SHROOM4Q9ULL8 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC6.9□□□□□ -1.31
SHROOM4Q9ULL8 AF279873.1-201ENST00000523393 313 ntBASIC6.9□□□□□ -1.31
SHROOM4Q9ULL8 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC6.9□□□□□ -1.31
SHROOM4Q9ULL8 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC6.9□□□□□ -1.31
SHROOM4Q9ULL8 AL356118.1-201ENST00000635272 1078 ntBASIC6.9□□□□□ -1.31
SHROOM4Q9ULL8 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC6.9□□□□□ -1.31
SHROOM4Q9ULL8 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC6.9□□□□□ -1.31
SHROOM4Q9ULL8 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.31
SHROOM4Q9ULL8 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC6.9□□□□□ -1.31
SHROOM4Q9ULL8 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
SHROOM4Q9ULL8 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC6.89□□□□□ -1.31
SHROOM4Q9ULL8 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SHROOM4Q9ULL8 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
SHROOM4Q9ULL8 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SHROOM4Q9ULL8 MIR16-1-201ENST00000385271 89 ntBASIC6.89□□□□□ -1.31
SHROOM4Q9ULL8 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC6.89□□□□□ -1.31
SHROOM4Q9ULL8 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC6.89□□□□□ -1.31
SHROOM4Q9ULL8 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC6.89□□□□□ -1.31
SHROOM4Q9ULL8 RPL7P44-201ENST00000424827 742 ntBASIC6.89□□□□□ -1.31
SHROOM4Q9ULL8 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC6.89□□□□□ -1.31
SHROOM4Q9ULL8 TRAPPC2P9-201ENST00000434556 343 ntBASIC6.89□□□□□ -1.31
SHROOM4Q9ULL8 ELOCP8-201ENST00000439309 332 ntBASIC6.89□□□□□ -1.31
SHROOM4Q9ULL8 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC6.89□□□□□ -1.31
SHROOM4Q9ULL8 ELOCP15-201ENST00000442090 332 ntBASIC6.89□□□□□ -1.31
SHROOM4Q9ULL8 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC6.89□□□□□ -1.31
SHROOM4Q9ULL8 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC6.89□□□□□ -1.31
SHROOM4Q9ULL8 RPL27AP5-201ENST00000469428 449 ntBASIC6.89□□□□□ -1.31
SHROOM4Q9ULL8 AC104982.1-201ENST00000478775 574 ntBASIC6.89□□□□□ -1.31
SHROOM4Q9ULL8 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC6.89□□□□□ -1.31
SHROOM4Q9ULL8 RPL7P23-201ENST00000493874 747 ntBASIC6.89□□□□□ -1.31
SHROOM4Q9ULL8 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SHROOM4Q9ULL8 AC008837.1-201ENST00000511513 412 ntBASIC6.89□□□□□ -1.31
SHROOM4Q9ULL8 RNU4ATAC17P-201ENST00000517272 120 ntBASIC6.89□□□□□ -1.31
SHROOM4Q9ULL8 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC6.89□□□□□ -1.31
SHROOM4Q9ULL8 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC6.89□□□□□ -1.31
SHROOM4Q9ULL8 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC6.89□□□□□ -1.31
SHROOM4Q9ULL8 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC6.89□□□□□ -1.31
SHROOM4Q9ULL8 MIR5186-201ENST00000577504 120 ntBASIC6.89□□□□□ -1.31
SHROOM4Q9ULL8 DPRXP4-201ENST00000578053 568 ntBASIC6.89□□□□□ -1.31
SHROOM4Q9ULL8 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC6.89□□□□□ -1.31
SHROOM4Q9ULL8 AC010591.1-201ENST00000603941 649 ntBASIC6.89□□□□□ -1.31
SHROOM4Q9ULL8 AC124312.4-201ENST00000605533 310 ntBASIC6.89□□□□□ -1.31
SHROOM4Q9ULL8 AC144521.1-201ENST00000607148 956 ntBASIC6.89□□□□□ -1.31
SHROOM4Q9ULL8 AC093673.2-201ENST00000609674 331 ntBASIC6.89□□□□□ -1.31
SHROOM4Q9ULL8 AL391834.2-201ENST00000609982 546 ntBASIC6.89□□□□□ -1.31
SHROOM4Q9ULL8 AP006248.2-201ENST00000623309 592 ntBASIC6.89□□□□□ -1.31
SHROOM4Q9ULL8 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SHROOM4Q9ULL8 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
SHROOM4Q9ULL8 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC6.89□□□□□ -1.31
SHROOM4Q9ULL8 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC6.88□□□□□ -1.31
SHROOM4Q9ULL8 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC6.88□□□□□ -1.31
SHROOM4Q9ULL8 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
SHROOM4Q9ULL8 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
SHROOM4Q9ULL8 ANKRD36P1-201ENST00000344424 659 ntBASIC6.88□□□□□ -1.31
SHROOM4Q9ULL8 RNU6-925P-201ENST00000384629 104 ntBASIC6.88□□□□□ -1.31
SHROOM4Q9ULL8 RNA5SP424-201ENST00000390988 115 ntBASIC6.88□□□□□ -1.31
SHROOM4Q9ULL8 MTCO2P31-201ENST00000402702 684 ntBASIC6.88□□□□□ -1.31
SHROOM4Q9ULL8 AC092447.2-201ENST00000435487 669 ntBASIC6.88□□□□□ -1.31
SHROOM4Q9ULL8 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC6.88□□□□□ -1.31
SHROOM4Q9ULL8 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC6.88□□□□□ -1.31
SHROOM4Q9ULL8 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC6.88□□□□□ -1.31
SHROOM4Q9ULL8 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC6.88□□□□□ -1.31
SHROOM4Q9ULL8 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC6.88□□□□□ -1.31
SHROOM4Q9ULL8 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC6.88□□□□□ -1.31
SHROOM4Q9ULL8 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC6.88□□□□□ -1.31
SHROOM4Q9ULL8 MIR4458-201ENST00000578872 75 ntBASIC6.88□□□□□ -1.31
SHROOM4Q9ULL8 AC002487.1-201ENST00000604565 994 ntBASIC6.88□□□□□ -1.31
SHROOM4Q9ULL8 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC6.88□□□□□ -1.31
SHROOM4Q9ULL8 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC6.88□□□□□ -1.31
SHROOM4Q9ULL8 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
SHROOM4Q9ULL8 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC6.88□□□□□ -1.31
SHROOM4Q9ULL8 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
SHROOM4Q9ULL8 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SHROOM4Q9ULL8 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
SHROOM4Q9ULL8 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC6.87□□□□□ -1.31
SHROOM4Q9ULL8 AC245054.1-201ENST00000420944 258 ntBASIC6.87□□□□□ -1.31
SHROOM4Q9ULL8 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC6.87□□□□□ -1.31
SHROOM4Q9ULL8 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC6.87□□□□□ -1.31
SHROOM4Q9ULL8 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC6.87□□□□□ -1.31
SHROOM4Q9ULL8 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC6.87□□□□□ -1.31
SHROOM4Q9ULL8 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC6.87□□□□□ -1.31
SHROOM4Q9ULL8 RPL21P13-201ENST00000488305 481 ntBASIC6.87□□□□□ -1.31
SHROOM4Q9ULL8 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SHROOM4Q9ULL8 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC6.87□□□□□ -1.31
SHROOM4Q9ULL8 LRRC6P1-201ENST00000532188 885 ntBASIC6.87□□□□□ -1.31
SHROOM4Q9ULL8 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC6.87□□□□□ -1.31
SHROOM4Q9ULL8 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC6.87□□□□□ -1.31
SHROOM4Q9ULL8 SETP1-201ENST00000556014 845 ntBASIC6.87□□□□□ -1.31
SHROOM4Q9ULL8 HMGB3P26-201ENST00000560051 582 ntBASIC6.87□□□□□ -1.31
SHROOM4Q9ULL8 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms