Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 HLFP1-201ENST00000402375 499 ntBASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 RNA5SP129-201ENST00000410276 118 ntBASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 MTND4P22-201ENST00000413116 1169 ntBASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 RPS7P15-201ENST00000415804 584 ntBASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 RPL36P19-201ENST00000430744 301 ntBASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 AC005189.1-201ENST00000431286 310 ntBASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 AL035407.2-201ENST00000454090 378 ntBASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 U3.44-201ENST00000458938 192 ntBASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 AL358832.1-201ENST00000497800 389 ntBASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 AC026427.2-201ENST00000506228 536 ntBASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 RN7SKP13-201ENST00000515933 244 ntBASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 AC092747.2-201ENST00000545069 983 ntBASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 AC093014.1-201ENST00000548926 724 ntBASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 AC020914.6-201ENST00000594327 272 ntBASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 BNIP3P19-201ENST00000605397 577 ntBASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 OR2BH1P-201ENST00000608850 864 ntBASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 AL442067.2-201ENST00000614033 363 ntBASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 AC003001.2-201ENST00000616294 831 ntBASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 AC079684.1-201ENST00000621405 437 ntBASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 AF117829.1-206ENST00000621883 3802 ntBASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 AP003400.6-201ENST00000624698 740 ntBASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 AL392088.2-201ENST00000637607 285 ntBASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 RNU6-50P-201ENST00000362356 103 ntBASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 RNU6-252P-201ENST00000363232 107 ntBASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 HMGB3P31-201ENST00000413333 595 ntBASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 AC091390.3-201ENST00000426478 338 ntBASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 MTND4LP7-201ENST00000431728 294 ntBASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 AC073063.1-201ENST00000434352 607 ntBASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 HMGN2P20-201ENST00000437531 273 ntBASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 AC007000.2-201ENST00000442564 487 ntBASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 AF279873.1-201ENST00000523393 313 ntBASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 EIF5A2P1-201ENST00000564027 460 ntBASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 AL390816.3-201ENST00000604527 1066 ntBASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 AC004775.1-201ENST00000607389 753 ntBASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 AC015802.5-201ENST00000607478 399 ntBASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 MFSD8-236ENST00000641509 4050 ntBASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TM9SF3Q9HD45 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.67□□□□□ -1.82
TM9SF3Q9HD45 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.67□□□□□ -1.82
TM9SF3Q9HD45 ZNF734P-201ENST00000419494 1534 ntBASIC3.67□□□□□ -1.82
TM9SF3Q9HD45 RNA5SP27-201ENST00000363839 119 ntBASIC3.67□□□□□ -1.82
TM9SF3Q9HD45 SNORA11C-201ENST00000408532 129 ntBASIC3.67□□□□□ -1.82
TM9SF3Q9HD45 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.67□□□□□ -1.82
TM9SF3Q9HD45 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.67□□□□□ -1.82
TM9SF3Q9HD45 AC092641.1-201ENST00000440229 772 ntBASIC3.67□□□□□ -1.82
TM9SF3Q9HD45 AL691517.1-201ENST00000440833 1235 ntBASIC3.67□□□□□ -1.82
TM9SF3Q9HD45 AC007967.1-201ENST00000455422 1159 ntBASIC3.67□□□□□ -1.82
TM9SF3Q9HD45 AC092754.2-201ENST00000463506 460 ntBASIC3.67□□□□□ -1.82
TM9SF3Q9HD45 AL024509.2-201ENST00000493462 493 ntBASIC3.67□□□□□ -1.82
TM9SF3Q9HD45 AC133963.2-201ENST00000513686 578 ntBASIC3.67□□□□□ -1.82
TM9SF3Q9HD45 RNA5SP208-201ENST00000516156 78 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms