Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USB1Q9BQ65 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USB1Q9BQ65 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
USB1Q9BQ65 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USB1Q9BQ65 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
USB1Q9BQ65 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USB1Q9BQ65 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USB1Q9BQ65 RNU6-1266P-201ENST00000362794 105 ntBASIC6.18□□□□□ -1.42
USB1Q9BQ65 AL590704.1-201ENST00000402856 794 ntBASIC6.18□□□□□ -1.42
USB1Q9BQ65 SUMO2P13-201ENST00000403109 272 ntBASIC6.18□□□□□ -1.42
USB1Q9BQ65 RNU6ATAC16P-201ENST00000408591 138 ntBASIC6.18□□□□□ -1.42
USB1Q9BQ65 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.18□□□□□ -1.42
USB1Q9BQ65 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.18□□□□□ -1.42
USB1Q9BQ65 AC007365.2-201ENST00000428806 458 ntBASIC6.18□□□□□ -1.42
USB1Q9BQ65 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.18□□□□□ -1.42
USB1Q9BQ65 FTLP17-201ENST00000432567 525 ntBASIC6.18□□□□□ -1.42
USB1Q9BQ65 AC073063.1-201ENST00000434352 607 ntBASIC6.18□□□□□ -1.42
USB1Q9BQ65 SDHCP3-201ENST00000445371 506 ntBASIC6.18□□□□□ -1.42
USB1Q9BQ65 DEFA11P-201ENST00000446470 261 ntBASIC6.18□□□□□ -1.42
USB1Q9BQ65 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USB1Q9BQ65 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.18□□□□□ -1.42
USB1Q9BQ65 AL354710.1-201ENST00000453641 246 ntBASIC6.18□□□□□ -1.42
USB1Q9BQ65 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.18□□□□□ -1.42
USB1Q9BQ65 AC022730.1-201ENST00000473114 568 ntBASIC6.18□□□□□ -1.42
USB1Q9BQ65 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
USB1Q9BQ65 CR383656.1-201ENST00000484916 377 ntBASIC6.18□□□□□ -1.42
USB1Q9BQ65 RPS17P5-201ENST00000498293 408 ntBASIC6.18□□□□□ -1.42
USB1Q9BQ65 FTH1P24-201ENST00000503502 462 ntBASIC6.18□□□□□ -1.42
USB1Q9BQ65 AC055733.3-201ENST00000505214 523 ntBASIC6.18□□□□□ -1.42
USB1Q9BQ65 AC008958.1-201ENST00000511047 682 ntBASIC6.18□□□□□ -1.42
USB1Q9BQ65 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC6.18□□□□□ -1.42
USB1Q9BQ65 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.18□□□□□ -1.42
USB1Q9BQ65 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC6.18□□□□□ -1.42
USB1Q9BQ65 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC6.18□□□□□ -1.42
USB1Q9BQ65 SSU72P6-201ENST00000532644 488 ntBASIC6.18□□□□□ -1.42
USB1Q9BQ65 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.18□□□□□ -1.42
USB1Q9BQ65 CBX3P4-201ENST00000538909 354 ntBASIC6.18□□□□□ -1.42
USB1Q9BQ65 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC6.18□□□□□ -1.42
USB1Q9BQ65 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.18□□□□□ -1.42
USB1Q9BQ65 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.18□□□□□ -1.42
USB1Q9BQ65 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC6.18□□□□□ -1.42
USB1Q9BQ65 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC6.18□□□□□ -1.42
USB1Q9BQ65 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC6.18□□□□□ -1.42
USB1Q9BQ65 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC6.18□□□□□ -1.42
USB1Q9BQ65 AC073046.2-201ENST00000604756 527 ntBASIC6.18□□□□□ -1.42
USB1Q9BQ65 RN7SL126P-201ENST00000616400 299 ntBASIC6.18□□□□□ -1.42
USB1Q9BQ65 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC6.18□□□□□ -1.42
USB1Q9BQ65 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USB1Q9BQ65 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USB1Q9BQ65 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC6.18□□□□□ -1.42
USB1Q9BQ65 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USB1Q9BQ65 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USB1Q9BQ65 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USB1Q9BQ65 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
USB1Q9BQ65 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USB1Q9BQ65 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
USB1Q9BQ65 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
USB1Q9BQ65 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
USB1Q9BQ65 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
USB1Q9BQ65 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USB1Q9BQ65 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
USB1Q9BQ65 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
USB1Q9BQ65 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
USB1Q9BQ65 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.17□□□□□ -1.42
USB1Q9BQ65 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.17□□□□□ -1.42
USB1Q9BQ65 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
USB1Q9BQ65 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USB1Q9BQ65 EOGT-210ENST00000615922 1931 ntBASIC6.17□□□□□ -1.42
USB1Q9BQ65 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
USB1Q9BQ65 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC6.17□□□□□ -1.42
USB1Q9BQ65 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USB1Q9BQ65 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USB1Q9BQ65 snoU2_19.2-201ENST00000363024 80 ntBASIC6.17□□□□□ -1.42
USB1Q9BQ65 RN7SKP107-201ENST00000364157 290 ntBASIC6.17□□□□□ -1.42
USB1Q9BQ65 RNU2-21P-201ENST00000410368 188 ntBASIC6.17□□□□□ -1.42
USB1Q9BQ65 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC6.17□□□□□ -1.42
USB1Q9BQ65 AC007098.1-201ENST00000420122 367 ntBASIC6.17□□□□□ -1.42
USB1Q9BQ65 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC6.17□□□□□ -1.42
USB1Q9BQ65 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC6.17□□□□□ -1.42
USB1Q9BQ65 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC6.17□□□□□ -1.42
USB1Q9BQ65 PTMAP6-201ENST00000439110 327 ntBASIC6.17□□□□□ -1.42
USB1Q9BQ65 FHP1-201ENST00000442741 703 ntBASIC6.17□□□□□ -1.42
USB1Q9BQ65 REG1CP-206ENST00000447469 496 ntBASIC6.17□□□□□ -1.42
USB1Q9BQ65 NDUFB4P10-201ENST00000452541 359 ntBASIC6.17□□□□□ -1.42
USB1Q9BQ65 AC234775.1-201ENST00000454247 670 ntBASIC6.17□□□□□ -1.42
USB1Q9BQ65 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC6.17□□□□□ -1.42
USB1Q9BQ65 VN1R105P-201ENST00000486595 910 ntBASIC6.17□□□□□ -1.42
USB1Q9BQ65 RPS27P20-201ENST00000492051 246 ntBASIC6.17□□□□□ -1.42
USB1Q9BQ65 AC107393.1-201ENST00000512403 346 ntBASIC6.17□□□□□ -1.42
USB1Q9BQ65 AC005798.1-201ENST00000513715 387 ntBASIC6.17□□□□□ -1.42
USB1Q9BQ65 AC016065.2-201ENST00000514530 444 ntBASIC6.17□□□□□ -1.42
USB1Q9BQ65 MINOS1P4-201ENST00000515470 318 ntBASIC6.17□□□□□ -1.42
USB1Q9BQ65 RN7SKP82-201ENST00000516786 223 ntBASIC6.17□□□□□ -1.42
USB1Q9BQ65 Y_RNA.713-201ENST00000517013 96 ntBASIC6.17□□□□□ -1.42
USB1Q9BQ65 AC087441.2-201ENST00000529141 262 ntBASIC6.17□□□□□ -1.42
USB1Q9BQ65 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC6.17□□□□□ -1.42
USB1Q9BQ65 AP002392.1-201ENST00000537692 208 ntBASIC6.17□□□□□ -1.42
USB1Q9BQ65 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC6.17□□□□□ -1.42
USB1Q9BQ65 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC6.17□□□□□ -1.42
USB1Q9BQ65 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms