Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AP000942.1-201ENST00000463969 747 ntBASIC4.22□□□□□ -1.73
SNED1Q8TER0 CABYRP1-201ENST00000465493 1045 ntBASIC4.22□□□□□ -1.73
SNED1Q8TER0 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.22□□□□□ -1.73
SNED1Q8TER0 AC004069.2-201ENST00000505438 1114 ntBASIC4.22□□□□□ -1.73
SNED1Q8TER0 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.22□□□□□ -1.73
SNED1Q8TER0 AC069306.1-201ENST00000507006 843 ntBASIC4.22□□□□□ -1.73
SNED1Q8TER0 AC108157.1-201ENST00000510511 539 ntBASIC4.22□□□□□ -1.73
SNED1Q8TER0 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC4.22□□□□□ -1.73
SNED1Q8TER0 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.22□□□□□ -1.73
SNED1Q8TER0 AC007834.2-201ENST00000536310 343 ntBASIC4.22□□□□□ -1.73
SNED1Q8TER0 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.22□□□□□ -1.73
SNED1Q8TER0 KLKP1-201ENST00000595979 403 ntBASIC4.22□□□□□ -1.73
SNED1Q8TER0 AC068790.2-201ENST00000602601 557 ntBASIC4.22□□□□□ -1.73
SNED1Q8TER0 GAS5-AS1-201ENST00000602767 694 ntBASIC4.22□□□□□ -1.73
SNED1Q8TER0 AL365400.2-201ENST00000605604 902 ntBASIC4.22□□□□□ -1.73
SNED1Q8TER0 AC124016.2-201ENST00000610058 665 ntBASIC4.22□□□□□ -1.73
SNED1Q8TER0 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.22□□□□□ -1.73
SNED1Q8TER0 AC026585.1-201ENST00000619582 524 ntBASIC4.22□□□□□ -1.73
SNED1Q8TER0 AC091304.6-201ENST00000619761 202 ntBASIC4.22□□□□□ -1.73
SNED1Q8TER0 AC013470.4-201ENST00000619978 986 ntBASIC4.22□□□□□ -1.73
SNED1Q8TER0 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.22□□□□□ -1.73
SNED1Q8TER0 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SNED1Q8TER0 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SNED1Q8TER0 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
SNED1Q8TER0 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
SNED1Q8TER0 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
SNED1Q8TER0 RNA5SP197-201ENST00000363357 119 ntBASIC4.21□□□□□ -1.73
SNED1Q8TER0 RNA5SP42-201ENST00000364278 115 ntBASIC4.21□□□□□ -1.73
SNED1Q8TER0 RNU6-304P-201ENST00000364855 107 ntBASIC4.21□□□□□ -1.73
SNED1Q8TER0 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.21□□□□□ -1.73
SNED1Q8TER0 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
SNED1Q8TER0 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.21□□□□□ -1.73
SNED1Q8TER0 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.21□□□□□ -1.73
SNED1Q8TER0 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.21□□□□□ -1.73
SNED1Q8TER0 AC063979.1-201ENST00000415539 377 ntBASIC4.21□□□□□ -1.73
SNED1Q8TER0 IFNNP1-201ENST00000429219 553 ntBASIC4.21□□□□□ -1.73
SNED1Q8TER0 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.21□□□□□ -1.73
SNED1Q8TER0 VN1R108P-201ENST00000431580 830 ntBASIC4.21□□□□□ -1.73
SNED1Q8TER0 ZNF965P-201ENST00000432501 817 ntBASIC4.21□□□□□ -1.73
SNED1Q8TER0 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.21□□□□□ -1.73
SNED1Q8TER0 HMGB3P9-201ENST00000441799 583 ntBASIC4.21□□□□□ -1.73
SNED1Q8TER0 RNFT1P2-201ENST00000443064 757 ntBASIC4.21□□□□□ -1.73
SNED1Q8TER0 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.21□□□□□ -1.73
SNED1Q8TER0 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.21□□□□□ -1.73
SNED1Q8TER0 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4.21□□□□□ -1.73
SNED1Q8TER0 CCDC75P1-201ENST00000469247 791 ntBASIC4.21□□□□□ -1.73
SNED1Q8TER0 AC093663.2-201ENST00000484625 313 ntBASIC4.21□□□□□ -1.73
SNED1Q8TER0 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
SNED1Q8TER0 AC023141.12-201ENST00000512399 199 ntBASIC4.21□□□□□ -1.73
SNED1Q8TER0 RNU6-311P-201ENST00000516224 102 ntBASIC4.21□□□□□ -1.73
SNED1Q8TER0 RNA5SP341-201ENST00000516261 117 ntBASIC4.21□□□□□ -1.73
SNED1Q8TER0 Vault.1-201ENST00000516474 102 ntBASIC4.21□□□□□ -1.73
SNED1Q8TER0 Y_RNA.688-201ENST00000516565 95 ntBASIC4.21□□□□□ -1.73
SNED1Q8TER0 RNU6-889P-201ENST00000517189 103 ntBASIC4.21□□□□□ -1.73
SNED1Q8TER0 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.21□□□□□ -1.73
SNED1Q8TER0 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.21□□□□□ -1.73
SNED1Q8TER0 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.21□□□□□ -1.73
SNED1Q8TER0 PCNAP1-202ENST00000595299 752 ntBASIC4.21□□□□□ -1.73
SNED1Q8TER0 AC113368.1-201ENST00000603736 382 ntBASIC4.21□□□□□ -1.73
SNED1Q8TER0 HMGB1P51-201ENST00000605166 638 ntBASIC4.21□□□□□ -1.73
SNED1Q8TER0 MIR486-1-201ENST00000612171 68 ntBASIC4.21□□□□□ -1.73
SNED1Q8TER0 AC231759.1-201ENST00000616455 597 ntBASIC4.21□□□□□ -1.73
SNED1Q8TER0 AL512506.2-201ENST00000624472 458 ntBASIC4.21□□□□□ -1.73
SNED1Q8TER0 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.21□□□□□ -1.74
SNED1Q8TER0 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
SNED1Q8TER0 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.21□□□□□ -1.74
SNED1Q8TER0 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
SNED1Q8TER0 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SNED1Q8TER0 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SNED1Q8TER0 AC119744.1-201ENST00000454746 1715 ntBASIC4.21□□□□□ -1.74
SNED1Q8TER0 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
SNED1Q8TER0 SNORA44-201ENST00000384584 132 ntBASIC4.21□□□□□ -1.74
SNED1Q8TER0 RNU6-146P-201ENST00000384602 108 ntBASIC4.21□□□□□ -1.74
SNED1Q8TER0 MTATP6P20-201ENST00000414147 562 ntBASIC4.21□□□□□ -1.74
SNED1Q8TER0 MTCO3P4-201ENST00000419236 787 ntBASIC4.21□□□□□ -1.74
SNED1Q8TER0 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.21□□□□□ -1.74
SNED1Q8TER0 AL353705.1-201ENST00000433468 480 ntBASIC4.21□□□□□ -1.74
SNED1Q8TER0 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.21□□□□□ -1.74
SNED1Q8TER0 PTP4A1P3-201ENST00000433661 420 ntBASIC4.21□□□□□ -1.74
SNED1Q8TER0 ATP5C1P1-201ENST00000441945 895 ntBASIC4.21□□□□□ -1.74
SNED1Q8TER0 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.21□□□□□ -1.74
SNED1Q8TER0 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.21□□□□□ -1.74
SNED1Q8TER0 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.21□□□□□ -1.74
SNED1Q8TER0 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SNED1Q8TER0 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.21□□□□□ -1.74
SNED1Q8TER0 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.21□□□□□ -1.74
SNED1Q8TER0 AC011492.1-201ENST00000600023 315 ntBASIC4.21□□□□□ -1.74
SNED1Q8TER0 AC080013.3-201ENST00000606839 578 ntBASIC4.21□□□□□ -1.74
SNED1Q8TER0 AC245008.1-201ENST00000608123 476 ntBASIC4.21□□□□□ -1.74
SNED1Q8TER0 AC005021.1-201ENST00000608730 355 ntBASIC4.21□□□□□ -1.74
SNED1Q8TER0 AC021755.4-201ENST00000616620 456 ntBASIC4.21□□□□□ -1.74
SNED1Q8TER0 AC092140.2-201ENST00000618027 521 ntBASIC4.21□□□□□ -1.74
SNED1Q8TER0 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SNED1Q8TER0 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SNED1Q8TER0 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.2□□□□□ -1.74
SNED1Q8TER0 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
SNED1Q8TER0 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
SNED1Q8TER0 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.2□□□□□ -1.74
SNED1Q8TER0 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SNED1Q8TER0 RNU1-18P-201ENST00000363062 164 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms