Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HERC6Q8IVU3 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
HERC6Q8IVU3 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
HERC6Q8IVU3 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HERC6Q8IVU3 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HERC6Q8IVU3 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.6□□□□□ -1.67
HERC6Q8IVU3 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HERC6Q8IVU3 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HERC6Q8IVU3 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HERC6Q8IVU3 HDGFP1-201ENST00000405943 252 ntBASIC4.6□□□□□ -1.67
HERC6Q8IVU3 MTND4P22-201ENST00000413116 1169 ntBASIC4.6□□□□□ -1.67
HERC6Q8IVU3 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.6□□□□□ -1.67
HERC6Q8IVU3 MTND1P32-201ENST00000433043 938 ntBASIC4.6□□□□□ -1.67
HERC6Q8IVU3 MTND4P6-201ENST00000438297 472 ntBASIC4.6□□□□□ -1.67
HERC6Q8IVU3 AC092427.1-201ENST00000439177 601 ntBASIC4.6□□□□□ -1.67
HERC6Q8IVU3 MTCYBP34-201ENST00000439552 670 ntBASIC4.6□□□□□ -1.67
HERC6Q8IVU3 MTND1P31-201ENST00000449206 961 ntBASIC4.6□□□□□ -1.67
HERC6Q8IVU3 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.6□□□□□ -1.67
HERC6Q8IVU3 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.6□□□□□ -1.67
HERC6Q8IVU3 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.6□□□□□ -1.67
HERC6Q8IVU3 MTCO3P11-201ENST00000455103 774 ntBASIC4.6□□□□□ -1.67
HERC6Q8IVU3 RPL23AP81-201ENST00000455252 467 ntBASIC4.6□□□□□ -1.67
HERC6Q8IVU3 AC026412.2-201ENST00000512270 1075 ntBASIC4.6□□□□□ -1.67
HERC6Q8IVU3 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.6□□□□□ -1.67
HERC6Q8IVU3 AC026726.1-201ENST00000512859 601 ntBASIC4.6□□□□□ -1.67
HERC6Q8IVU3 AC016065.2-201ENST00000514530 444 ntBASIC4.6□□□□□ -1.67
HERC6Q8IVU3 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.6□□□□□ -1.67
HERC6Q8IVU3 TRMT10BP1-201ENST00000519377 943 ntBASIC4.6□□□□□ -1.67
HERC6Q8IVU3 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.6□□□□□ -1.67
HERC6Q8IVU3 OR5AK1P-201ENST00000524837 922 ntBASIC4.6□□□□□ -1.67
HERC6Q8IVU3 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.6□□□□□ -1.67
HERC6Q8IVU3 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.6□□□□□ -1.67
HERC6Q8IVU3 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.6□□□□□ -1.67
HERC6Q8IVU3 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.6□□□□□ -1.67
HERC6Q8IVU3 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.6□□□□□ -1.67
HERC6Q8IVU3 AL031281.1-201ENST00000604049 488 ntBASIC4.6□□□□□ -1.67
HERC6Q8IVU3 AL161756.2-201ENST00000604597 246 ntBASIC4.6□□□□□ -1.67
HERC6Q8IVU3 AC010680.4-201ENST00000605334 543 ntBASIC4.6□□□□□ -1.67
HERC6Q8IVU3 AC006270.3-201ENST00000605967 1036 ntBASIC4.6□□□□□ -1.67
HERC6Q8IVU3 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HERC6Q8IVU3 AC097655.1-201ENST00000635075 318 ntBASIC4.6□□□□□ -1.67
HERC6Q8IVU3 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.6□□□□□ -1.67
HERC6Q8IVU3 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HERC6Q8IVU3 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.6□□□□□ -1.67
HERC6Q8IVU3 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HERC6Q8IVU3 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HERC6Q8IVU3 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HERC6Q8IVU3 EOGT-210ENST00000615922 1931 ntBASIC4.6□□□□□ -1.67
HERC6Q8IVU3 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.6□□□□□ -1.67
HERC6Q8IVU3 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.6□□□□□ -1.67
HERC6Q8IVU3 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HERC6Q8IVU3 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HERC6Q8IVU3 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HERC6Q8IVU3 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HERC6Q8IVU3 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.59□□□□□ -1.67
HERC6Q8IVU3 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HERC6Q8IVU3 OR11H4-201ENST00000315409 1082 ntBASIC4.59□□□□□ -1.67
HERC6Q8IVU3 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.59□□□□□ -1.67
HERC6Q8IVU3 SNORD113-6-201ENST00000363345 75 ntBASIC4.59□□□□□ -1.67
HERC6Q8IVU3 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
HERC6Q8IVU3 RNU1-63P-201ENST00000383902 164 ntBASIC4.59□□□□□ -1.67
HERC6Q8IVU3 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.59□□□□□ -1.67
HERC6Q8IVU3 AL049545.1-201ENST00000401856 572 ntBASIC4.59□□□□□ -1.67
HERC6Q8IVU3 AL590704.1-201ENST00000402856 794 ntBASIC4.59□□□□□ -1.67
HERC6Q8IVU3 AL121834.1-202ENST00000404494 277 ntBASIC4.59□□□□□ -1.67
HERC6Q8IVU3 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HERC6Q8IVU3 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC4.59□□□□□ -1.67
HERC6Q8IVU3 RPL31P45-201ENST00000419532 356 ntBASIC4.59□□□□□ -1.67
HERC6Q8IVU3 MTND5P25-201ENST00000430499 799 ntBASIC4.59□□□□□ -1.67
HERC6Q8IVU3 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.59□□□□□ -1.67
HERC6Q8IVU3 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.59□□□□□ -1.67
HERC6Q8IVU3 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.59□□□□□ -1.67
HERC6Q8IVU3 AL008629.1-201ENST00000438615 184 ntBASIC4.59□□□□□ -1.67
HERC6Q8IVU3 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HERC6Q8IVU3 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.59□□□□□ -1.67
HERC6Q8IVU3 VN1R10P-201ENST00000447106 875 ntBASIC4.59□□□□□ -1.67
HERC6Q8IVU3 MTND2P19-201ENST00000449129 1012 ntBASIC4.59□□□□□ -1.67
HERC6Q8IVU3 AC104978.1-201ENST00000449387 391 ntBASIC4.59□□□□□ -1.67
HERC6Q8IVU3 SLC31A1P1-201ENST00000451221 567 ntBASIC4.59□□□□□ -1.67
HERC6Q8IVU3 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.59□□□□□ -1.67
HERC6Q8IVU3 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.59□□□□□ -1.67
HERC6Q8IVU3 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.59□□□□□ -1.67
HERC6Q8IVU3 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.59□□□□□ -1.67
HERC6Q8IVU3 STMN1P2-201ENST00000508435 439 ntBASIC4.59□□□□□ -1.67
HERC6Q8IVU3 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.59□□□□□ -1.67
HERC6Q8IVU3 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.59□□□□□ -1.67
HERC6Q8IVU3 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.59□□□□□ -1.67
HERC6Q8IVU3 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.59□□□□□ -1.67
HERC6Q8IVU3 DUXAP5-201ENST00000529668 529 ntBASIC4.59□□□□□ -1.67
HERC6Q8IVU3 OR8L1P-201ENST00000534005 955 ntBASIC4.59□□□□□ -1.67
HERC6Q8IVU3 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
HERC6Q8IVU3 AL389895.1-201ENST00000554127 252 ntBASIC4.59□□□□□ -1.67
HERC6Q8IVU3 HMGB3P26-201ENST00000560051 582 ntBASIC4.59□□□□□ -1.67
HERC6Q8IVU3 AL512347.1-201ENST00000566420 503 ntBASIC4.59□□□□□ -1.67
HERC6Q8IVU3 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.59□□□□□ -1.67
HERC6Q8IVU3 YWHAQP7-201ENST00000603536 658 ntBASIC4.59□□□□□ -1.67
HERC6Q8IVU3 LLPHP1-201ENST00000603571 367 ntBASIC4.59□□□□□ -1.67
HERC6Q8IVU3 AC068313.1-201ENST00000604028 1008 ntBASIC4.59□□□□□ -1.67
HERC6Q8IVU3 AC069304.2-201ENST00000605154 435 ntBASIC4.59□□□□□ -1.67
HERC6Q8IVU3 AC092650.2-201ENST00000619984 902 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms