Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 PTGES3P2-201ENST00000407942 482 ntBASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 RNU6-272P-201ENST00000411028 104 ntBASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 AC017079.2-201ENST00000416102 485 ntBASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 AL606495.1-201ENST00000422100 813 ntBASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 GTF2IP23-201ENST00000423746 351 ntBASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 BX890604.2-201ENST00000427883 474 ntBASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 AL513175.1-201ENST00000431492 780 ntBASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 AC008264.1-201ENST00000447612 367 ntBASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 TXNP6-201ENST00000510190 310 ntBASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 HIGD1AP3-201ENST00000515857 278 ntBASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 AC095057.3-201ENST00000567102 1157 ntBASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 MIR3690-201ENST00000580266 75 ntBASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 YWHAQP7-201ENST00000603536 658 ntBASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 MIR6875-201ENST00000617506 72 ntBASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 AC018816.2-201ENST00000621460 353 ntBASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 AL109659.3-201ENST00000624985 950 ntBASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 AC092184.1-201ENST00000625042 715 ntBASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 AC017071.1-201ENST00000564407 2204 ntBASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.4□□□□□ -1.86
NUDCD3Q8IVD9 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.4□□□□□ -1.86
NUDCD3Q8IVD9 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 RNU6-600P-201ENST00000362524 99 ntBASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 AC007256.1-201ENST00000392253 2765 ntBASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 DSTNP4-201ENST00000399472 474 ntBASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 AL355379.1-201ENST00000405542 640 ntBASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 RNA5SP293-201ENST00000410527 113 ntBASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 PSMA2P3-201ENST00000429685 675 ntBASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 RPL36P19-201ENST00000430744 301 ntBASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 SETP5-201ENST00000437270 562 ntBASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 ISCA1P2-201ENST00000438679 421 ntBASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 AC092170.1-201ENST00000440211 356 ntBASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 RAB11AP1-201ENST00000442978 646 ntBASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 Z77249.1-201ENST00000444622 1175 ntBASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 HSFY6P-201ENST00000445573 403 ntBASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 GAPDHP36-201ENST00000480688 918 ntBASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 RPS27P23-201ENST00000487608 251 ntBASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 RPL23AP55-201ENST00000498163 452 ntBASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 AC108078.3-201ENST00000502633 489 ntBASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 OR5H3P-201ENST00000502817 919 ntBASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 RNU6-202P-201ENST00000515998 96 ntBASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 AL845331.3-202ENST00000562856 261 ntBASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 EIF5A2P1-201ENST00000564027 460 ntBASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 AC009948.4-201ENST00000604692 675 ntBASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 BNIP3P4-201ENST00000604946 565 ntBASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 AC090425.2-201ENST00000608818 501 ntBASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 AC073592.7-201ENST00000623659 507 ntBASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
NUDCD3Q8IVD9 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NUDCD3Q8IVD9 AC004972.1-201ENST00000623934 2209 ntBASIC3.39□□□□□ -1.87
NUDCD3Q8IVD9 OR4A15-201ENST00000314706 1035 ntBASIC3.39□□□□□ -1.87
NUDCD3Q8IVD9 SNORD56.3-201ENST00000363507 71 ntBASIC3.39□□□□□ -1.87
NUDCD3Q8IVD9 RN7SKP227-201ENST00000364445 330 ntBASIC3.39□□□□□ -1.87
NUDCD3Q8IVD9 RN7SKP156-201ENST00000410308 342 ntBASIC3.39□□□□□ -1.87
NUDCD3Q8IVD9 USP9YP19-201ENST00000412165 485 ntBASIC3.39□□□□□ -1.87
NUDCD3Q8IVD9 Z99755.1-201ENST00000414048 380 ntBASIC3.39□□□□□ -1.87
NUDCD3Q8IVD9 AC244098.2-201ENST00000422068 99 ntBASIC3.39□□□□□ -1.87
NUDCD3Q8IVD9 OR4C10P-201ENST00000434991 931 ntBASIC3.39□□□□□ -1.87
NUDCD3Q8IVD9 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.39□□□□□ -1.87
NUDCD3Q8IVD9 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.39□□□□□ -1.87
NUDCD3Q8IVD9 HMGB3P11-201ENST00000440127 604 ntBASIC3.39□□□□□ -1.87
NUDCD3Q8IVD9 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms