Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AL121576.1-201ENST00000556055 276 ntBASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 AC011492.1-201ENST00000600023 315 ntBASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 AC125494.3-201ENST00000602759 455 ntBASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 KATNBL1P1-201ENST00000605192 748 ntBASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 AL355365.1-201ENST00000616480 294 ntBASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 STMN1P1-201ENST00000617809 440 ntBASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 AC024595.1-201ENST00000623088 387 ntBASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 AC083865.1-201ENST00000636634 831 ntBASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 AC017104.5-201ENST00000637647 639 ntBASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 MFSD8-233ENST00000641482 4860 ntBASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H3F3CQ6NXT2 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
H3F3CQ6NXT2 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
H3F3CQ6NXT2 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.28□□□□□ -1.88
H3F3CQ6NXT2 ELL2P4-201ENST00000446870 1376 ntBASIC3.28□□□□□ -1.88
H3F3CQ6NXT2 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.28□□□□□ -1.88
H3F3CQ6NXT2 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
H3F3CQ6NXT2 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.28□□□□□ -1.88
H3F3CQ6NXT2 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
H3F3CQ6NXT2 MIR490-201ENST00000384865 128 ntBASIC3.28□□□□□ -1.88
H3F3CQ6NXT2 U3.39-201ENST00000408569 239 ntBASIC3.28□□□□□ -1.88
H3F3CQ6NXT2 DBIP2-201ENST00000419076 262 ntBASIC3.28□□□□□ -1.88
H3F3CQ6NXT2 MTND4P24-201ENST00000424002 397 ntBASIC3.28□□□□□ -1.88
H3F3CQ6NXT2 TRIM60P13-201ENST00000432350 1283 ntBASIC3.28□□□□□ -1.88
H3F3CQ6NXT2 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.28□□□□□ -1.88
H3F3CQ6NXT2 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.28□□□□□ -1.88
H3F3CQ6NXT2 RPL23AP73-201ENST00000492507 471 ntBASIC3.28□□□□□ -1.88
H3F3CQ6NXT2 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.28□□□□□ -1.88
H3F3CQ6NXT2 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.28□□□□□ -1.88
H3F3CQ6NXT2 AC074250.1-201ENST00000511117 192 ntBASIC3.28□□□□□ -1.88
H3F3CQ6NXT2 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.28□□□□□ -1.88
H3F3CQ6NXT2 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.28□□□□□ -1.88
H3F3CQ6NXT2 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.28□□□□□ -1.88
H3F3CQ6NXT2 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.28□□□□□ -1.88
H3F3CQ6NXT2 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.28□□□□□ -1.88
H3F3CQ6NXT2 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
H3F3CQ6NXT2 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.28□□□□□ -1.88
H3F3CQ6NXT2 CYP2C60P-201ENST00000566088 139 ntBASIC3.28□□□□□ -1.88
H3F3CQ6NXT2 AC010735.1-201ENST00000567305 1026 ntBASIC3.28□□□□□ -1.88
H3F3CQ6NXT2 RN7SL339P-201ENST00000580597 296 ntBASIC3.28□□□□□ -1.88
H3F3CQ6NXT2 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.28□□□□□ -1.88
H3F3CQ6NXT2 OR4G1P-201ENST00000588632 938 ntBASIC3.28□□□□□ -1.88
H3F3CQ6NXT2 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.28□□□□□ -1.88
H3F3CQ6NXT2 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.28□□□□□ -1.88
H3F3CQ6NXT2 AL365503.1-201ENST00000605247 905 ntBASIC3.28□□□□□ -1.88
H3F3CQ6NXT2 AC025016.1-201ENST00000616746 682 ntBASIC3.28□□□□□ -1.88
H3F3CQ6NXT2 AC092184.1-201ENST00000625042 715 ntBASIC3.28□□□□□ -1.88
H3F3CQ6NXT2 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.28□□□□□ -1.88
H3F3CQ6NXT2 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
H3F3CQ6NXT2 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.28□□□□□ -1.88
H3F3CQ6NXT2 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 ZNF37BP-203ENST00000452306 1352 ntBASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 RNA5SP295-201ENST00000362655 121 ntBASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 RNA5SP387-201ENST00000364226 106 ntBASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 RNU1-33P-201ENST00000364249 162 ntBASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 RNU6-1181P-201ENST00000384191 106 ntBASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 EI24P2-201ENST00000397776 1076 ntBASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 HSPE1P8-201ENST00000406997 288 ntBASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 AC092745.2-202ENST00000411880 369 ntBASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 ARF4P2-201ENST00000430209 526 ntBASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 RPL36P19-201ENST00000430744 301 ntBASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 SETP5-201ENST00000437270 562 ntBASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 RPS29P31-201ENST00000446147 164 ntBASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 SLC31A1P1-201ENST00000451221 567 ntBASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 AC008280.2-201ENST00000455473 307 ntBASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 HMGN2P16-201ENST00000456802 261 ntBASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 AC010468.1-201ENST00000461022 817 ntBASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 PLGLA-201ENST00000465668 449 ntBASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 AC023598.1-201ENST00000472521 361 ntBASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 SYPL1P1-201ENST00000473622 768 ntBASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 AL358832.1-201ENST00000497800 389 ntBASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 RN7SKP60-201ENST00000516985 239 ntBASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 AP004371.1-201ENST00000525240 214 ntBASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 MIR5186-201ENST00000577504 120 ntBASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 KLKP1-201ENST00000595979 403 ntBASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 AC012468.1-201ENST00000604888 430 ntBASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 AL355802.4-201ENST00000607635 548 ntBASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.27□□□□□ -1.89
H3F3CQ6NXT2 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms