Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 AC107081.3-201ENST00000612715 2034 ntBASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 AC018634.1-201ENST00000437554 401 ntBASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 AC008121.2-201ENST00000614647 523 ntBASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 AC245054.2-201ENST00000415639 319 ntBASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 AC063976.3-201ENST00000426849 329 ntBASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 ISCA1P6-201ENST00000427740 390 ntBASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 IFNA11P-201ENST00000446352 526 ntBASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 WASF1P1-201ENST00000447560 1131 ntBASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 AC093663.2-201ENST00000484625 313 ntBASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 UBTFL10-201ENST00000528532 562 ntBASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 HMGB3P11-201ENST00000440127 604 ntBASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 AC106872.2-201ENST00000494303 480 ntBASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 OR5AK3P-201ENST00000527486 1297 ntBASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC1.86□□□□□ -2.11
VPS13DQ5THJ4 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC1.85□□□□□ -2.11
VPS13DQ5THJ4 TOMM20P4-201ENST00000427861 435 ntBASIC1.85□□□□□ -2.11
VPS13DQ5THJ4 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC1.85□□□□□ -2.11
VPS13DQ5THJ4 B3GNT2P1-201ENST00000434960 952 ntBASIC1.85□□□□□ -2.11
VPS13DQ5THJ4 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC1.85□□□□□ -2.11
VPS13DQ5THJ4 SNORA31.1-201ENST00000515993 133 ntBASIC1.85□□□□□ -2.11
VPS13DQ5THJ4 SNORA31.5-201ENST00000516190 133 ntBASIC1.85□□□□□ -2.11
VPS13DQ5THJ4 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC1.85□□□□□ -2.11
VPS13DQ5THJ4 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
VPS13DQ5THJ4 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
VPS13DQ5THJ4 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC1.85□□□□□ -2.11
VPS13DQ5THJ4 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC1.85□□□□□ -2.11
VPS13DQ5THJ4 RPL7P25-201ENST00000404151 721 ntBASIC1.85□□□□□ -2.11
VPS13DQ5THJ4 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
VPS13DQ5THJ4 GTF2IP23-201ENST00000423746 351 ntBASIC1.85□□□□□ -2.11
VPS13DQ5THJ4 AC093278.1-201ENST00000494700 600 ntBASIC1.85□□□□□ -2.11
VPS13DQ5THJ4 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC1.85□□□□□ -2.11
VPS13DQ5THJ4 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
VPS13DQ5THJ4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC1.85□□□□□ -2.11
VPS13DQ5THJ4 AC064859.1-201ENST00000624741 174 ntBASIC1.85□□□□□ -2.11
VPS13DQ5THJ4 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
VPS13DQ5THJ4 HSPA8P4-201ENST00000511877 1920 ntBASIC1.85□□□□□ -2.11
VPS13DQ5THJ4 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC1.85□□□□□ -2.11
VPS13DQ5THJ4 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
VPS13DQ5THJ4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
VPS13DQ5THJ4 SNORA68.2-201ENST00000391263 128 ntBASIC1.85□□□□□ -2.11
VPS13DQ5THJ4 SEC11B-201ENST00000518383 499 ntBASIC1.85□□□□□ -2.11
VPS13DQ5THJ4 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC1.85□□□□□ -2.11
VPS13DQ5THJ4 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC1.85□□□□□ -2.11
VPS13DQ5THJ4 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC1.85□□□□□ -2.11
VPS13DQ5THJ4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
VPS13DQ5THJ4 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
VPS13DQ5THJ4 RNU1-87P-201ENST00000363727 170 ntBASIC1.84□□□□□ -2.11
VPS13DQ5THJ4 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC1.84□□□□□ -2.11
VPS13DQ5THJ4 CACYBPP2-201ENST00000453625 678 ntBASIC1.84□□□□□ -2.11
VPS13DQ5THJ4 ST13P14-201ENST00000474095 734 ntBASIC1.84□□□□□ -2.11
VPS13DQ5THJ4 AC006445.2-201ENST00000510061 472 ntBASIC1.84□□□□□ -2.11
VPS13DQ5THJ4 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC1.84□□□□□ -2.11
VPS13DQ5THJ4 AL450489.1-201ENST00000612071 468 ntBASIC1.84□□□□□ -2.11
VPS13DQ5THJ4 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC1.84□□□□□ -2.11
VPS13DQ5THJ4 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC1.84□□□□□ -2.11
VPS13DQ5THJ4 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
VPS13DQ5THJ4 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
VPS13DQ5THJ4 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC1.84□□□□□ -2.11
VPS13DQ5THJ4 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
VPS13DQ5THJ4 AC093311.1-201ENST00000506586 2021 ntBASIC1.84□□□□□ -2.11
VPS13DQ5THJ4 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
VPS13DQ5THJ4 RPL21P132-201ENST00000331267 462 ntBASIC1.84□□□□□ -2.11
VPS13DQ5THJ4 RPS7P13-201ENST00000413955 498 ntBASIC1.84□□□□□ -2.11
VPS13DQ5THJ4 AL031736.2-201ENST00000426573 787 ntBASIC1.84□□□□□ -2.11
VPS13DQ5THJ4 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.84□□□□□ -2.11
VPS13DQ5THJ4 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC1.84□□□□□ -2.11
VPS13DQ5THJ4 AP001646.1-201ENST00000527936 915 ntBASIC1.84□□□□□ -2.11
VPS13DQ5THJ4 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC1.84□□□□□ -2.11
VPS13DQ5THJ4 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
VPS13DQ5THJ4 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms