Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 AP002907.1-201ENST00000606361 1430 ntBASIC4.55□□□□□ -1.68
PTCHD3Q3KNS1 AL450326.2-201ENST00000421913 1962 ntBASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 RNU5F-6P-201ENST00000362979 116 ntBASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 RNU6-1243P-201ENST00000364028 107 ntBASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 OR6C69P-201ENST00000394268 893 ntBASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 AC136624.1-201ENST00000400791 413 ntBASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 RNU2-21P-201ENST00000410368 188 ntBASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 OR8G2P-201ENST00000412796 908 ntBASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 TPMTP2-201ENST00000414372 726 ntBASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 AL358176.3-201ENST00000420757 454 ntBASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 COX6CP15-201ENST00000426313 211 ntBASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 DNAJC19P7-201ENST00000428811 344 ntBASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 C8orf59P1-201ENST00000429930 303 ntBASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 AC016831.4-201ENST00000438302 307 ntBASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 H2AFZP5-201ENST00000446960 382 ntBASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 AC239367.2-201ENST00000447309 705 ntBASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 FAM172BP-201ENST00000487497 1089 ntBASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 PRELID3BP7-201ENST00000503606 469 ntBASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 TMEM251P1-201ENST00000503717 318 ntBASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 AC111000.3-201ENST00000508057 576 ntBASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 AC015912.2-201ENST00000571053 181 ntBASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 RN7SL652P-201ENST00000577769 300 ntBASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 AC073648.5-201ENST00000603502 305 ntBASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 AL133338.2-201ENST00000604292 736 ntBASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 AC099842.1-201ENST00000619919 596 ntBASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 MIR7641-1-201ENST00000627518 61 ntBASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
PTCHD3Q3KNS1 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 OR10J6P-201ENST00000289731 930 ntBASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 RPL23AP57-201ENST00000332361 466 ntBASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 RNU1-32P-201ENST00000363937 159 ntBASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 RNU6-1042P-201ENST00000384204 107 ntBASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 EIF5P1-201ENST00000400019 1231 ntBASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 MIR320C1-201ENST00000408566 88 ntBASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 AC109780.2-201ENST00000413467 845 ntBASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 ELOCP17-201ENST00000414751 326 ntBASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 AC140479.3-201ENST00000418944 1126 ntBASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 AL590609.2-201ENST00000421430 368 ntBASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 RPS27AP7-201ENST00000422792 455 ntBASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 AL359265.2-201ENST00000434367 631 ntBASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 CEACAMP6-201ENST00000452007 574 ntBASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 USP9YP34-201ENST00000453983 808 ntBASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 SNORD42A-201ENST00000459584 64 ntBASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 AC011825.1-201ENST00000484967 388 ntBASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 AC106872.3-201ENST00000495104 446 ntBASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 AC022447.3-201ENST00000506865 495 ntBASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 AC108043.1-201ENST00000512696 574 ntBASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 AC025881.1-201ENST00000518851 512 ntBASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.53□□□□□ -1.68
PTCHD3Q3KNS1 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms