Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC072039.1-201ENST00000477611 581 ntBASIC3.59□□□□□ -1.83
CX3CL1P78423 AC008897.1-201ENST00000494006 347 ntBASIC3.59□□□□□ -1.83
CX3CL1P78423 AC108145.1-201ENST00000503770 153 ntBASIC3.59□□□□□ -1.83
CX3CL1P78423 AC005178.1-201ENST00000508392 440 ntBASIC3.59□□□□□ -1.83
CX3CL1P78423 VWA8P1-201ENST00000510889 176 ntBASIC3.59□□□□□ -1.83
CX3CL1P78423 AC015795.1-201ENST00000513669 327 ntBASIC3.59□□□□□ -1.83
CX3CL1P78423 RNA5SP216-201ENST00000516111 123 ntBASIC3.59□□□□□ -1.83
CX3CL1P78423 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.59□□□□□ -1.83
CX3CL1P78423 AP003385.6-201ENST00000531603 374 ntBASIC3.59□□□□□ -1.83
CX3CL1P78423 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.59□□□□□ -1.83
CX3CL1P78423 AC107954.1-201ENST00000565906 727 ntBASIC3.59□□□□□ -1.83
CX3CL1P78423 MIR5186-201ENST00000577504 120 ntBASIC3.59□□□□□ -1.83
CX3CL1P78423 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.59□□□□□ -1.83
CX3CL1P78423 AL669831.4-202ENST00000590817 238 ntBASIC3.59□□□□□ -1.83
CX3CL1P78423 BPIFA4P-203ENST00000603168 689 ntBASIC3.59□□□□□ -1.83
CX3CL1P78423 AC008782.1-201ENST00000603386 430 ntBASIC3.59□□□□□ -1.83
CX3CL1P78423 AL163642.2-201ENST00000604722 1019 ntBASIC3.59□□□□□ -1.83
CX3CL1P78423 AC010738.1-201ENST00000604970 987 ntBASIC3.59□□□□□ -1.83
CX3CL1P78423 RNA5SP108-201ENST00000605921 117 ntBASIC3.59□□□□□ -1.83
CX3CL1P78423 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.59□□□□□ -1.83
CX3CL1P78423 AC097065.2-201ENST00000608159 533 ntBASIC3.59□□□□□ -1.83
CX3CL1P78423 AL133243.1-201ENST00000614487 366 ntBASIC3.59□□□□□ -1.83
CX3CL1P78423 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.59□□□□□ -1.83
CX3CL1P78423 AL121873.1-201ENST00000616013 524 ntBASIC3.59□□□□□ -1.83
CX3CL1P78423 AL049536.1-201ENST00000625043 744 ntBASIC3.59□□□□□ -1.83
CX3CL1P78423 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.59□□□□□ -1.83
CX3CL1P78423 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.59□□□□□ -1.83
CX3CL1P78423 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.59□□□□□ -1.83
CX3CL1P78423 MIR3974-201ENST00000637126 96 ntBASIC3.59□□□□□ -1.83
CX3CL1P78423 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.59□□□□□ -1.83
CX3CL1P78423 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CX3CL1P78423 AC011477.1-204ENST00000623416 1325 ntBASIC3.59□□□□□ -1.83
CX3CL1P78423 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.59□□□□□ -1.84
CX3CL1P78423 AC125257.1-201ENST00000560400 2930 ntBASIC3.59□□□□□ -1.84
CX3CL1P78423 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CX3CL1P78423 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CX3CL1P78423 AC007390.2-201ENST00000606229 3803 ntBASIC3.59□□□□□ -1.84
CX3CL1P78423 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
CX3CL1P78423 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CX3CL1P78423 MTND5P3-201ENST00000438536 1800 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 NXPH1-205ENST00000602349 1953 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CX3CL1P78423 AC105074.1-201ENST00000623380 3095 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CX3CL1P78423 CPHL1P-201ENST00000461341 3407 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CX3CL1P78423 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CX3CL1P78423 RNU6-500P-201ENST00000362349 107 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 RNU6-462P-201ENST00000362659 105 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 SNORD74.4-201ENST00000364129 80 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 RNVU1-6-201ENST00000364688 164 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 RNU6-343P-201ENST00000364709 104 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 U3.15-201ENST00000365398 212 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 RNA5SP88-201ENST00000365560 109 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 RNU6-723P-201ENST00000383973 107 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 RNU6-878P-201ENST00000384578 110 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 RNU6-952P-201ENST00000391164 108 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CX3CL1P78423 HSPD1P16-201ENST00000402302 394 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC3.58□□□□□ -1.84
CX3CL1P78423 AL590139.1-201ENST00000416267 400 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 AC083875.1-201ENST00000419509 405 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.58□□□□□ -1.84
CX3CL1P78423 AL590103.1-201ENST00000434488 307 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.58□□□□□ -1.84
CX3CL1P78423 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CX3CL1P78423 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.58□□□□□ -1.84
CX3CL1P78423 MTND2P22-201ENST00000444325 1033 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 Z83846.1-201ENST00000446798 265 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 AC012671.1-201ENST00000451912 203 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 VN1R32P-201ENST00000452234 905 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.58□□□□□ -1.84
CX3CL1P78423 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.58□□□□□ -1.84
CX3CL1P78423 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.58□□□□□ -1.84
CX3CL1P78423 RPS20P24-201ENST00000457473 361 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.58□□□□□ -1.84
CX3CL1P78423 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.58□□□□□ -1.84
CX3CL1P78423 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CX3CL1P78423 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.58□□□□□ -1.84
CX3CL1P78423 AC112198.1-201ENST00000505369 1220 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.58□□□□□ -1.84
CX3CL1P78423 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.58□□□□□ -1.84
CX3CL1P78423 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.58□□□□□ -1.84
CX3CL1P78423 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.58□□□□□ -1.84
CX3CL1P78423 RN7SKP116-201ENST00000516902 319 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.58□□□□□ -1.84
CX3CL1P78423 AC008802.1-201ENST00000519121 791 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 AC022861.1-201ENST00000522981 663 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CX3CL1P78423 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.58□□□□□ -1.84
CX3CL1P78423 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.58□□□□□ -1.84
CX3CL1P78423 AC137768.1-201ENST00000549998 553 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 AC007954.1-201ENST00000554198 494 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.58□□□□□ -1.84
CX3CL1P78423 AC103792.1-201ENST00000603591 919 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 Z99497.2-201ENST00000603634 310 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 AC121247.2-201ENST00000604776 136 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 RNU6-88P-201ENST00000606801 100 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 AC020634.1-201ENST00000608701 549 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 AC122133.1-201ENST00000613964 233 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms