Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
LSM6P62312 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
LSM6P62312 RNA5SP197-201ENST00000363357 119 ntBASIC2.93□□□□□ -1.94
LSM6P62312 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.93□□□□□ -1.94
LSM6P62312 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
LSM6P62312 PTMAP2-201ENST00000397627 327 ntBASIC2.93□□□□□ -1.94
LSM6P62312 AL354719.1-201ENST00000406535 843 ntBASIC2.93□□□□□ -1.94
LSM6P62312 RNA5SP107-201ENST00000411358 122 ntBASIC2.93□□□□□ -1.94
LSM6P62312 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LSM6P62312 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LSM6P62312 KCTD10P1-201ENST00000434203 625 ntBASIC2.93□□□□□ -1.94
LSM6P62312 FTH1P1-201ENST00000437933 532 ntBASIC2.93□□□□□ -1.94
LSM6P62312 ISCA1P2-201ENST00000438679 421 ntBASIC2.93□□□□□ -1.94
LSM6P62312 AC122718.1-201ENST00000439448 744 ntBASIC2.93□□□□□ -1.94
LSM6P62312 HMGB3P11-201ENST00000440127 604 ntBASIC2.93□□□□□ -1.94
LSM6P62312 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.93□□□□□ -1.94
LSM6P62312 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC2.93□□□□□ -1.94
LSM6P62312 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.93□□□□□ -1.94
LSM6P62312 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.93□□□□□ -1.94
LSM6P62312 MORF4L1P4-201ENST00000450245 976 ntBASIC2.93□□□□□ -1.94
LSM6P62312 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LSM6P62312 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.93□□□□□ -1.94
LSM6P62312 HMGN2P13-201ENST00000476476 274 ntBASIC2.93□□□□□ -1.94
LSM6P62312 KATNBL1P4-201ENST00000503545 918 ntBASIC2.93□□□□□ -1.94
LSM6P62312 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.93□□□□□ -1.94
LSM6P62312 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.93□□□□□ -1.94
LSM6P62312 OR4V1P-201ENST00000525394 1140 ntBASIC2.93□□□□□ -1.94
LSM6P62312 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LSM6P62312 AL121594.4-201ENST00000556211 1196 ntBASIC2.93□□□□□ -1.94
LSM6P62312 AC092868.3-201ENST00000560515 784 ntBASIC2.93□□□□□ -1.94
LSM6P62312 MIR5186-201ENST00000577504 120 ntBASIC2.93□□□□□ -1.94
LSM6P62312 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC2.93□□□□□ -1.94
LSM6P62312 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC2.93□□□□□ -1.94
LSM6P62312 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC2.93□□□□□ -1.94
LSM6P62312 U3.45-201ENST00000607547 219 ntBASIC2.93□□□□□ -1.94
LSM6P62312 AC092354.2-201ENST00000607786 514 ntBASIC2.93□□□□□ -1.94
LSM6P62312 uc_338.1-201ENST00000612113 180 ntBASIC2.93□□□□□ -1.94
LSM6P62312 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.93□□□□□ -1.94
LSM6P62312 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
LSM6P62312 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.93□□□□□ -1.94
LSM6P62312 AC073055.1-201ENST00000456901 1621 ntBASIC2.93□□□□□ -1.94
LSM6P62312 XPOTP1-201ENST00000443317 2398 ntBASIC2.93□□□□□ -1.94
LSM6P62312 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.92□□□□□ -1.94
LSM6P62312 MIR148B-201ENST00000362252 99 ntBASIC2.92□□□□□ -1.94
LSM6P62312 RNU6-50P-201ENST00000362356 103 ntBASIC2.92□□□□□ -1.94
LSM6P62312 Y_RNA.126-201ENST00000363382 111 ntBASIC2.92□□□□□ -1.94
LSM6P62312 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
LSM6P62312 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
LSM6P62312 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
LSM6P62312 MIR200C-201ENST00000384980 68 ntBASIC2.92□□□□□ -1.94
LSM6P62312 RNU1-101P-201ENST00000391171 127 ntBASIC2.92□□□□□ -1.94
LSM6P62312 RPS3AP26-201ENST00000398259 784 ntBASIC2.92□□□□□ -1.94
LSM6P62312 RNA5SP129-201ENST00000410276 118 ntBASIC2.92□□□□□ -1.94
LSM6P62312 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.92□□□□□ -1.94
LSM6P62312 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.92□□□□□ -1.94
LSM6P62312 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.92□□□□□ -1.94
LSM6P62312 ETF1P3-201ENST00000430422 1160 ntBASIC2.92□□□□□ -1.94
LSM6P62312 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.92□□□□□ -1.94
LSM6P62312 AL353705.1-201ENST00000433468 480 ntBASIC2.92□□□□□ -1.94
LSM6P62312 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
LSM6P62312 CST9LP2-201ENST00000437612 320 ntBASIC2.92□□□□□ -1.94
LSM6P62312 ELOCP3-201ENST00000439303 348 ntBASIC2.92□□□□□ -1.94
LSM6P62312 ATP5C1P1-201ENST00000441945 895 ntBASIC2.92□□□□□ -1.94
LSM6P62312 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.92□□□□□ -1.94
LSM6P62312 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.92□□□□□ -1.94
LSM6P62312 PDSS1P2-201ENST00000449397 678 ntBASIC2.92□□□□□ -1.94
LSM6P62312 NECAP1P2-201ENST00000455668 727 ntBASIC2.92□□□□□ -1.94
LSM6P62312 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC2.92□□□□□ -1.94
LSM6P62312 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.92□□□□□ -1.94
LSM6P62312 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.92□□□□□ -1.94
LSM6P62312 AC006499.5-201ENST00000505037 514 ntBASIC2.92□□□□□ -1.94
LSM6P62312 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
LSM6P62312 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.92□□□□□ -1.94
LSM6P62312 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.92□□□□□ -1.94
LSM6P62312 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC2.92□□□□□ -1.94
LSM6P62312 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC2.92□□□□□ -1.94
LSM6P62312 AC104115.2-201ENST00000523026 687 ntBASIC2.92□□□□□ -1.94
LSM6P62312 OR8I1P-201ENST00000529291 931 ntBASIC2.92□□□□□ -1.94
LSM6P62312 AC109635.4-202ENST00000531666 412 ntBASIC2.92□□□□□ -1.94
LSM6P62312 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.92□□□□□ -1.94
LSM6P62312 POLR2KP1-201ENST00000553226 168 ntBASIC2.92□□□□□ -1.94
LSM6P62312 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.92□□□□□ -1.94
LSM6P62312 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.92□□□□□ -1.94
LSM6P62312 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.92□□□□□ -1.94
LSM6P62312 AL590282.1-201ENST00000610379 1136 ntBASIC2.92□□□□□ -1.94
LSM6P62312 AL359535.1-201ENST00000612100 1087 ntBASIC2.92□□□□□ -1.94
LSM6P62312 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.92□□□□□ -1.94
LSM6P62312 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
LSM6P62312 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
LSM6P62312 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
LSM6P62312 POMP-202ENST00000460403 1428 ntTSL 3 BASIC2.92□□□□□ -1.94
LSM6P62312 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
LSM6P62312 RNA5SP383-201ENST00000362934 120 ntBASIC2.91□□□□□ -1.94
LSM6P62312 RNA5SP50-201ENST00000363731 107 ntBASIC2.91□□□□□ -1.94
LSM6P62312 AL583834.1-201ENST00000406943 343 ntBASIC2.91□□□□□ -1.94
LSM6P62312 LINC01881-201ENST00000416103 412 ntBASIC2.91□□□□□ -1.94
LSM6P62312 AC245291.1-201ENST00000419501 328 ntBASIC2.91□□□□□ -1.94
LSM6P62312 RPL7P46-201ENST00000425129 740 ntBASIC2.91□□□□□ -1.94
LSM6P62312 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC2.91□□□□□ -1.94
LSM6P62312 AL606490.7-201ENST00000433136 191 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms