Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.89□□□□□ -1.95
VBP1P61758 AP004217.1-201ENST00000480579 346 ntBASIC2.89□□□□□ -1.95
VBP1P61758 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC2.89□□□□□ -1.95
VBP1P61758 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC2.89□□□□□ -1.95
VBP1P61758 AC009901.1-201ENST00000506703 541 ntBASIC2.89□□□□□ -1.95
VBP1P61758 AC093853.1-201ENST00000515689 483 ntBASIC2.89□□□□□ -1.95
VBP1P61758 RN7SKP43-201ENST00000516173 320 ntBASIC2.89□□□□□ -1.95
VBP1P61758 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC2.89□□□□□ -1.95
VBP1P61758 AC007991.1-201ENST00000522680 631 ntBASIC2.89□□□□□ -1.95
VBP1P61758 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.89□□□□□ -1.95
VBP1P61758 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC2.89□□□□□ -1.95
VBP1P61758 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.89□□□□□ -1.95
VBP1P61758 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.89□□□□□ -1.95
VBP1P61758 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.89□□□□□ -1.95
VBP1P61758 AC006116.7-201ENST00000590141 756 ntBASIC2.89□□□□□ -1.95
VBP1P61758 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC2.89□□□□□ -1.95
VBP1P61758 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.89□□□□□ -1.95
VBP1P61758 AC002064.3-201ENST00000623448 346 ntBASIC2.89□□□□□ -1.95
VBP1P61758 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC2.89□□□□□ -1.95
VBP1P61758 AC087565.3-202ENST00000642085 1603 ntBASIC2.89□□□□□ -1.95
VBP1P61758 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
VBP1P61758 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VBP1P61758 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.88□□□□□ -1.95
VBP1P61758 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
VBP1P61758 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VBP1P61758 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.88□□□□□ -1.95
VBP1P61758 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
VBP1P61758 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VBP1P61758 VTRNA1-1-201ENST00000363120 99 ntBASIC2.88□□□□□ -1.95
VBP1P61758 SNORA62-201ENST00000365493 153 ntBASIC2.88□□□□□ -1.95
VBP1P61758 MIR105-2-201ENST00000385083 81 ntBASIC2.88□□□□□ -1.95
VBP1P61758 AL022722.2-201ENST00000402519 180 ntBASIC2.88□□□□□ -1.95
VBP1P61758 FO393413.1-201ENST00000402892 195 ntBASIC2.88□□□□□ -1.95
VBP1P61758 RNU2-65P-201ENST00000410162 185 ntBASIC2.88□□□□□ -1.95
VBP1P61758 RNA5SP229-201ENST00000410809 99 ntBASIC2.88□□□□□ -1.95
VBP1P61758 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC2.88□□□□□ -1.95
VBP1P61758 UBE2V1P6-201ENST00000430840 422 ntBASIC2.88□□□□□ -1.95
VBP1P61758 RPS26P56-201ENST00000444468 240 ntBASIC2.88□□□□□ -1.95
VBP1P61758 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.88□□□□□ -1.95
VBP1P61758 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.88□□□□□ -1.95
VBP1P61758 RPS4XP14-201ENST00000493072 781 ntBASIC2.88□□□□□ -1.95
VBP1P61758 AIG1P1-201ENST00000503376 148 ntBASIC2.88□□□□□ -1.95
VBP1P61758 SEM1P1-201ENST00000506694 209 ntBASIC2.88□□□□□ -1.95
VBP1P61758 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.88□□□□□ -1.95
VBP1P61758 AC105914.1-201ENST00000511798 226 ntBASIC2.88□□□□□ -1.95
VBP1P61758 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.88□□□□□ -1.95
VBP1P61758 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC2.88□□□□□ -1.95
VBP1P61758 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC2.88□□□□□ -1.95
VBP1P61758 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.88□□□□□ -1.95
VBP1P61758 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC2.88□□□□□ -1.95
VBP1P61758 AC245036.5-201ENST00000596330 847 ntBASIC2.88□□□□□ -1.95
VBP1P61758 AC007275.1-201ENST00000621243 671 ntBASIC2.88□□□□□ -1.95
VBP1P61758 AL356321.1-201ENST00000621360 228 ntBASIC2.88□□□□□ -1.95
VBP1P61758 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC2.88□□□□□ -1.95
VBP1P61758 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VBP1P61758 AC009487.2-201ENST00000420969 6821 ntBASIC2.88□□□□□ -1.95
VBP1P61758 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VBP1P61758 DDX6P1-205ENST00000441966 1436 ntBASIC2.87□□□□□ -1.95
VBP1P61758 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
VBP1P61758 MTND4P13-201ENST00000402078 1023 ntBASIC2.87□□□□□ -1.95
VBP1P61758 RNA5SP38-201ENST00000410750 119 ntBASIC2.87□□□□□ -1.95
VBP1P61758 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
VBP1P61758 RABEPKP1-201ENST00000440529 1026 ntBASIC2.87□□□□□ -1.95
VBP1P61758 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.87□□□□□ -1.95
VBP1P61758 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC2.87□□□□□ -1.95
VBP1P61758 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC2.87□□□□□ -1.95
VBP1P61758 SUN3-208ENST00000453192 801 ntTSL 5 BASIC2.87□□□□□ -1.95
VBP1P61758 AP002345.1-201ENST00000456493 928 ntBASIC2.87□□□□□ -1.95
VBP1P61758 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC2.87□□□□□ -1.95
VBP1P61758 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VBP1P61758 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.87□□□□□ -1.95
VBP1P61758 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.87□□□□□ -1.95
VBP1P61758 APOOP4-201ENST00000513530 597 ntBASIC2.87□□□□□ -1.95
VBP1P61758 SNORA31.20-201ENST00000517111 133 ntBASIC2.87□□□□□ -1.95
VBP1P61758 AL121594.4-201ENST00000556211 1196 ntBASIC2.87□□□□□ -1.95
VBP1P61758 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.87□□□□□ -1.95
VBP1P61758 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC2.87□□□□□ -1.95
VBP1P61758 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.87□□□□□ -1.95
VBP1P61758 AL133507.1-201ENST00000605269 557 ntBASIC2.87□□□□□ -1.95
VBP1P61758 AC099676.1-201ENST00000608886 657 ntBASIC2.87□□□□□ -1.95
VBP1P61758 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
VBP1P61758 AC127502.3-201ENST00000636170 1206 ntBASIC2.87□□□□□ -1.95
VBP1P61758 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VBP1P61758 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.87□□□□□ -1.95
VBP1P61758 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VBP1P61758 SAGE4P-201ENST00000442271 3381 ntBASIC2.86□□□□□ -1.95
VBP1P61758 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VBP1P61758 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
VBP1P61758 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC2.86□□□□□ -1.95
VBP1P61758 MIR181B1-201ENST00000385240 110 ntBASIC2.86□□□□□ -1.95
VBP1P61758 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
VBP1P61758 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.86□□□□□ -1.95
VBP1P61758 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC2.86□□□□□ -1.95
VBP1P61758 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC2.86□□□□□ -1.95
VBP1P61758 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.86□□□□□ -1.95
VBP1P61758 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VBP1P61758 MTCO1P45-201ENST00000431457 267 ntBASIC2.86□□□□□ -1.95
VBP1P61758 RPS12P18-201ENST00000442381 270 ntBASIC2.86□□□□□ -1.95
VBP1P61758 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.86□□□□□ -1.95
VBP1P61758 HMGB1P48-201ENST00000446155 598 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms