Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
GFRA1P56159 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC4.98□□□□□ -1.61
GFRA1P56159 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
GFRA1P56159 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
GFRA1P56159 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC4.98□□□□□ -1.61
GFRA1P56159 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
GFRA1P56159 Y_RNA.166-201ENST00000363730 102 ntBASIC4.98□□□□□ -1.61
GFRA1P56159 Y_RNA.367-201ENST00000365544 101 ntBASIC4.98□□□□□ -1.61
GFRA1P56159 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
GFRA1P56159 RNU6-39P-201ENST00000384344 107 ntBASIC4.98□□□□□ -1.61
GFRA1P56159 AC009804.1-201ENST00000400949 179 ntBASIC4.98□□□□□ -1.61
GFRA1P56159 Z97832.1-201ENST00000402490 328 ntBASIC4.98□□□□□ -1.61
GFRA1P56159 CYCSP10-201ENST00000417973 294 ntBASIC4.98□□□□□ -1.61
GFRA1P56159 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
GFRA1P56159 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
GFRA1P56159 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.98□□□□□ -1.61
GFRA1P56159 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
GFRA1P56159 AL365400.1-201ENST00000431854 640 ntBASIC4.98□□□□□ -1.61
GFRA1P56159 CFL1P1-202ENST00000432948 411 ntBASIC4.98□□□□□ -1.61
GFRA1P56159 RPL7P12-201ENST00000446719 750 ntBASIC4.98□□□□□ -1.61
GFRA1P56159 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.98□□□□□ -1.61
GFRA1P56159 AC011225.1-201ENST00000457751 369 ntBASIC4.98□□□□□ -1.61
GFRA1P56159 EIF4EP3-201ENST00000498782 656 ntBASIC4.98□□□□□ -1.61
GFRA1P56159 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.98□□□□□ -1.61
GFRA1P56159 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.98□□□□□ -1.61
GFRA1P56159 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.98□□□□□ -1.61
GFRA1P56159 SNORD27.1-201ENST00000516319 72 ntBASIC4.98□□□□□ -1.61
GFRA1P56159 RNU2-10P-201ENST00000516375 211 ntBASIC4.98□□□□□ -1.61
GFRA1P56159 SCARNA21.2-201ENST00000516600 166 ntBASIC4.98□□□□□ -1.61
GFRA1P56159 IGKV2D-36-201ENST00000518643 226 ntBASIC4.98□□□□□ -1.61
GFRA1P56159 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.98□□□□□ -1.61
GFRA1P56159 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.98□□□□□ -1.61
GFRA1P56159 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
GFRA1P56159 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.98□□□□□ -1.61
GFRA1P56159 AC122688.1-201ENST00000541494 223 ntBASIC4.98□□□□□ -1.61
GFRA1P56159 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.98□□□□□ -1.61
GFRA1P56159 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.98□□□□□ -1.61
GFRA1P56159 AC037471.2-201ENST00000564941 598 ntBASIC4.98□□□□□ -1.61
GFRA1P56159 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.98□□□□□ -1.61
GFRA1P56159 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.98□□□□□ -1.61
GFRA1P56159 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.98□□□□□ -1.61
GFRA1P56159 VN1R80P-201ENST00000597126 338 ntBASIC4.98□□□□□ -1.61
GFRA1P56159 IMMP1LP3-201ENST00000604197 224 ntBASIC4.98□□□□□ -1.61
GFRA1P56159 MIR6826-201ENST00000617808 98 ntBASIC4.98□□□□□ -1.61
GFRA1P56159 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.98□□□□□ -1.61
GFRA1P56159 AC040168.1-201ENST00000623594 991 ntBASIC4.98□□□□□ -1.61
GFRA1P56159 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
GFRA1P56159 AL359893.1-201ENST00000447628 1580 ntBASIC4.98□□□□□ -1.61
GFRA1P56159 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC4.98□□□□□ -1.61
GFRA1P56159 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
GFRA1P56159 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
GFRA1P56159 AL355834.1-201ENST00000556602 3965 ntBASIC4.98□□□□□ -1.61
GFRA1P56159 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
GFRA1P56159 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
GFRA1P56159 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.98□□□□□ -1.61
GFRA1P56159 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
GFRA1P56159 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
GFRA1P56159 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
GFRA1P56159 PABPC1P7-201ENST00000413177 1513 ntBASIC4.97□□□□□ -1.61
GFRA1P56159 AC009951.1-201ENST00000623674 2614 ntBASIC4.97□□□□□ -1.61
GFRA1P56159 AC009962.1-201ENST00000567327 3813 ntBASIC4.97□□□□□ -1.61
GFRA1P56159 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
GFRA1P56159 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
GFRA1P56159 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
GFRA1P56159 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
GFRA1P56159 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
GFRA1P56159 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
GFRA1P56159 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.97□□□□□ -1.61
GFRA1P56159 HSPE1P11-201ENST00000339579 310 ntBASIC4.97□□□□□ -1.61
GFRA1P56159 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.97□□□□□ -1.61
GFRA1P56159 U3.10-201ENST00000364459 214 ntBASIC4.97□□□□□ -1.61
GFRA1P56159 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
GFRA1P56159 MIR558-201ENST00000384920 94 ntBASIC4.97□□□□□ -1.61
GFRA1P56159 SNORD37.1-201ENST00000390968 65 ntBASIC4.97□□□□□ -1.61
GFRA1P56159 AL162578.1-201ENST00000406202 378 ntBASIC4.97□□□□□ -1.61
GFRA1P56159 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.97□□□□□ -1.61
GFRA1P56159 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.97□□□□□ -1.61
GFRA1P56159 MED13P1-201ENST00000428342 171 ntBASIC4.97□□□□□ -1.61
GFRA1P56159 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.97□□□□□ -1.61
GFRA1P56159 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.97□□□□□ -1.61
GFRA1P56159 AC021660.1-201ENST00000465006 554 ntBASIC4.97□□□□□ -1.61
GFRA1P56159 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.97□□□□□ -1.61
GFRA1P56159 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.97□□□□□ -1.61
GFRA1P56159 AC105417.1-201ENST00000514691 285 ntBASIC4.97□□□□□ -1.61
GFRA1P56159 RNU7-51P-201ENST00000516560 62 ntBASIC4.97□□□□□ -1.61
GFRA1P56159 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.97□□□□□ -1.61
GFRA1P56159 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.97□□□□□ -1.61
GFRA1P56159 SETP7-201ENST00000552169 453 ntBASIC4.97□□□□□ -1.61
GFRA1P56159 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.97□□□□□ -1.61
GFRA1P56159 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.97□□□□□ -1.61
GFRA1P56159 AC000068.2-201ENST00000608816 460 ntBASIC4.97□□□□□ -1.61
GFRA1P56159 AC103710.2-201ENST00000609912 942 ntBASIC4.97□□□□□ -1.61
GFRA1P56159 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
GFRA1P56159 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
GFRA1P56159 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.97□□□□□ -1.61
GFRA1P56159 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
GFRA1P56159 OR4G1P-203ENST00000641984 1631 ntBASIC4.97□□□□□ -1.61
GFRA1P56159 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
GFRA1P56159 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
GFRA1P56159 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms