Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SUMO3P55854 PGBD4P3-201ENST00000440731 581 ntBASIC4.46□□□□□ -1.7
SUMO3P55854 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.46□□□□□ -1.7
SUMO3P55854 AL022238.1-201ENST00000442557 355 ntBASIC4.46□□□□□ -1.7
SUMO3P55854 AC000111.2-201ENST00000448200 210 ntBASIC4.46□□□□□ -1.7
SUMO3P55854 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.46□□□□□ -1.7
SUMO3P55854 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.46□□□□□ -1.7
SUMO3P55854 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.46□□□□□ -1.7
SUMO3P55854 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.46□□□□□ -1.7
SUMO3P55854 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.46□□□□□ -1.7
SUMO3P55854 RN7SL329P-201ENST00000467740 299 ntBASIC4.46□□□□□ -1.7
SUMO3P55854 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.46□□□□□ -1.7
SUMO3P55854 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.46□□□□□ -1.7
SUMO3P55854 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.46□□□□□ -1.7
SUMO3P55854 ACTR3P3-201ENST00000480448 893 ntBASIC4.46□□□□□ -1.7
SUMO3P55854 OR5M14P-201ENST00000506803 618 ntBASIC4.46□□□□□ -1.7
SUMO3P55854 AC113430.1-201ENST00000506872 718 ntBASIC4.46□□□□□ -1.7
SUMO3P55854 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.46□□□□□ -1.7
SUMO3P55854 AC006390.1-201ENST00000508068 283 ntBASIC4.46□□□□□ -1.7
SUMO3P55854 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.46□□□□□ -1.7
SUMO3P55854 RN7SKP298-201ENST00000515950 94 ntBASIC4.46□□□□□ -1.7
SUMO3P55854 RNU6-201P-201ENST00000517100 61 ntBASIC4.46□□□□□ -1.7
SUMO3P55854 OR4R3P-201ENST00000525084 838 ntBASIC4.46□□□□□ -1.7
SUMO3P55854 BNIP3P1-201ENST00000547295 580 ntBASIC4.46□□□□□ -1.7
SUMO3P55854 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.46□□□□□ -1.7
SUMO3P55854 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.46□□□□□ -1.7
SUMO3P55854 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.46□□□□□ -1.7
SUMO3P55854 AC009101.1-201ENST00000568135 242 ntBASIC4.46□□□□□ -1.7
SUMO3P55854 EIF1P4-201ENST00000572664 335 ntBASIC4.46□□□□□ -1.7
SUMO3P55854 SNORA74C-1-201ENST00000580726 201 ntBASIC4.46□□□□□ -1.7
SUMO3P55854 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.46□□□□□ -1.7
SUMO3P55854 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.46□□□□□ -1.7
SUMO3P55854 AC009977.1-201ENST00000586015 570 ntBASIC4.46□□□□□ -1.7
SUMO3P55854 AC013244.1-201ENST00000604279 193 ntBASIC4.46□□□□□ -1.7
SUMO3P55854 AL451044.1-201ENST00000604867 238 ntBASIC4.46□□□□□ -1.7
SUMO3P55854 AC006566.1-201ENST00000608943 513 ntBASIC4.46□□□□□ -1.7
SUMO3P55854 AC005332.10-201ENST00000612725 619 ntBASIC4.46□□□□□ -1.7
SUMO3P55854 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.46□□□□□ -1.7
SUMO3P55854 AC026585.1-201ENST00000619582 524 ntBASIC4.46□□□□□ -1.7
SUMO3P55854 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
SUMO3P55854 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.46□□□□□ -1.7
SUMO3P55854 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.46□□□□□ -1.7
SUMO3P55854 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SUMO3P55854 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
SUMO3P55854 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SUMO3P55854 AC092447.7-201ENST00000422212 1621 ntBASIC4.46□□□□□ -1.7
SUMO3P55854 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
SUMO3P55854 AC009643.2-201ENST00000603543 1448 ntBASIC4.46□□□□□ -1.7
SUMO3P55854 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SUMO3P55854 DHX9P1-201ENST00000436565 3076 ntBASIC4.45□□□□□ -1.7
SUMO3P55854 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SUMO3P55854 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
SUMO3P55854 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.45□□□□□ -1.7
SUMO3P55854 MAPK10-320ENST00000641462 6696 ntBASIC4.45□□□□□ -1.7
SUMO3P55854 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SUMO3P55854 RNA5SP345-201ENST00000410646 108 ntBASIC4.45□□□□□ -1.7
SUMO3P55854 RNU2-66P-201ENST00000410650 161 ntBASIC4.45□□□□□ -1.7
SUMO3P55854 AL359704.1-201ENST00000411586 781 ntBASIC4.45□□□□□ -1.7
SUMO3P55854 RPS3AP3-201ENST00000411933 242 ntBASIC4.45□□□□□ -1.7
SUMO3P55854 AC114755.2-201ENST00000413520 361 ntBASIC4.45□□□□□ -1.7
SUMO3P55854 TBCAP2-201ENST00000416175 326 ntBASIC4.45□□□□□ -1.7
SUMO3P55854 AC245052.5-201ENST00000416320 649 ntBASIC4.45□□□□□ -1.7
SUMO3P55854 RPEP2-201ENST00000432149 701 ntBASIC4.45□□□□□ -1.7
SUMO3P55854 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.45□□□□□ -1.7
SUMO3P55854 AC244505.5-201ENST00000443639 207 ntBASIC4.45□□□□□ -1.7
SUMO3P55854 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.45□□□□□ -1.7
SUMO3P55854 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.45□□□□□ -1.7
SUMO3P55854 RPS20P32-201ENST00000456044 356 ntBASIC4.45□□□□□ -1.7
SUMO3P55854 AC099563.1-201ENST00000456086 418 ntBASIC4.45□□□□□ -1.7
SUMO3P55854 snoU13.3-201ENST00000459441 104 ntBASIC4.45□□□□□ -1.7
SUMO3P55854 HMGB1P25-201ENST00000468402 607 ntBASIC4.45□□□□□ -1.7
SUMO3P55854 ST13P14-201ENST00000474095 734 ntBASIC4.45□□□□□ -1.7
SUMO3P55854 AC021382.1-201ENST00000483523 359 ntBASIC4.45□□□□□ -1.7
SUMO3P55854 AC011825.1-201ENST00000484967 388 ntBASIC4.45□□□□□ -1.7
SUMO3P55854 AC004453.1-201ENST00000487895 408 ntBASIC4.45□□□□□ -1.7
SUMO3P55854 AC013356.1-201ENST00000489027 564 ntBASIC4.45□□□□□ -1.7
SUMO3P55854 AC011005.3-201ENST00000491624 395 ntBASIC4.45□□□□□ -1.7
SUMO3P55854 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.45□□□□□ -1.7
SUMO3P55854 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.45□□□□□ -1.7
SUMO3P55854 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.45□□□□□ -1.7
SUMO3P55854 GAPDHP56-201ENST00000506031 988 ntBASIC4.45□□□□□ -1.7
SUMO3P55854 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.45□□□□□ -1.7
SUMO3P55854 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.45□□□□□ -1.7
SUMO3P55854 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.45□□□□□ -1.7
SUMO3P55854 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.45□□□□□ -1.7
SUMO3P55854 DUXAP2-201ENST00000519198 589 ntBASIC4.45□□□□□ -1.7
SUMO3P55854 AP003467.2-201ENST00000520175 319 ntBASIC4.45□□□□□ -1.7
SUMO3P55854 OR4P1P-201ENST00000530808 1136 ntBASIC4.45□□□□□ -1.7
SUMO3P55854 SETP7-201ENST00000552169 453 ntBASIC4.45□□□□□ -1.7
SUMO3P55854 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.45□□□□□ -1.7
SUMO3P55854 AC044860.2-201ENST00000561005 179 ntBASIC4.45□□□□□ -1.7
SUMO3P55854 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.45□□□□□ -1.7
SUMO3P55854 MIR4646-201ENST00000580775 63 ntBASIC4.45□□□□□ -1.7
SUMO3P55854 AC025165.5-201ENST00000602802 578 ntBASIC4.45□□□□□ -1.7
SUMO3P55854 AC073648.5-201ENST00000603502 305 ntBASIC4.45□□□□□ -1.7
SUMO3P55854 AC211433.2-201ENST00000608433 387 ntBASIC4.45□□□□□ -1.7
SUMO3P55854 AC008250.2-201ENST00000615261 205 ntBASIC4.45□□□□□ -1.7
SUMO3P55854 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.45□□□□□ -1.7
SUMO3P55854 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SUMO3P55854 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms