Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.32□□□□□ -1.72
CLCN3P51790 AF001550.2-201ENST00000636643 217 ntBASIC4.32□□□□□ -1.72
CLCN3P51790 AC012442.3-202ENST00000636742 206 ntBASIC4.32□□□□□ -1.72
CLCN3P51790 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.32□□□□□ -1.72
CLCN3P51790 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLCN3P51790 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLCN3P51790 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLCN3P51790 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
CLCN3P51790 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLCN3P51790 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CLCN3P51790 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLCN3P51790 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.31□□□□□ -1.72
CLCN3P51790 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLCN3P51790 RNU6-251P-201ENST00000363235 104 ntBASIC4.31□□□□□ -1.72
CLCN3P51790 SNORD113-6-201ENST00000363345 75 ntBASIC4.31□□□□□ -1.72
CLCN3P51790 SNORD116.1-201ENST00000365628 92 ntBASIC4.31□□□□□ -1.72
CLCN3P51790 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLCN3P51790 SNORD116-2-201ENST00000384274 95 ntBASIC4.31□□□□□ -1.72
CLCN3P51790 U8.11-201ENST00000384699 133 ntBASIC4.31□□□□□ -1.72
CLCN3P51790 U8.12-201ENST00000384701 133 ntBASIC4.31□□□□□ -1.72
CLCN3P51790 SNORD116-6-201ENST00000384711 96 ntBASIC4.31□□□□□ -1.72
CLCN3P51790 RNA5SP171-201ENST00000391071 115 ntBASIC4.31□□□□□ -1.72
CLCN3P51790 PTMAP2-201ENST00000397627 327 ntBASIC4.31□□□□□ -1.72
CLCN3P51790 AL590084.1-201ENST00000407885 387 ntBASIC4.31□□□□□ -1.72
CLCN3P51790 SNORA3C-201ENST00000408792 125 ntBASIC4.31□□□□□ -1.72
CLCN3P51790 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.31□□□□□ -1.72
CLCN3P51790 GTF2IP23-201ENST00000423746 351 ntBASIC4.31□□□□□ -1.72
CLCN3P51790 RPP40P1-201ENST00000426762 456 ntBASIC4.31□□□□□ -1.72
CLCN3P51790 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.31□□□□□ -1.72
CLCN3P51790 AC083863.1-201ENST00000438811 231 ntBASIC4.31□□□□□ -1.72
CLCN3P51790 AC093155.1-201ENST00000440164 826 ntBASIC4.31□□□□□ -1.72
CLCN3P51790 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.31□□□□□ -1.72
CLCN3P51790 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.31□□□□□ -1.72
CLCN3P51790 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC4.31□□□□□ -1.72
CLCN3P51790 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.31□□□□□ -1.72
CLCN3P51790 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.31□□□□□ -1.72
CLCN3P51790 U8.18-201ENST00000459285 133 ntBASIC4.31□□□□□ -1.72
CLCN3P51790 ACTR3P3-201ENST00000480448 893 ntBASIC4.31□□□□□ -1.72
CLCN3P51790 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.31□□□□□ -1.72
CLCN3P51790 AC117522.2-201ENST00000510049 657 ntBASIC4.31□□□□□ -1.72
CLCN3P51790 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.31□□□□□ -1.72
CLCN3P51790 SCARNA14-201ENST00000516903 136 ntBASIC4.31□□□□□ -1.72
CLCN3P51790 TRMT10BP1-201ENST00000519377 943 ntBASIC4.31□□□□□ -1.72
CLCN3P51790 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.31□□□□□ -1.72
CLCN3P51790 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.31□□□□□ -1.72
CLCN3P51790 AC007834.2-201ENST00000536310 343 ntBASIC4.31□□□□□ -1.72
CLCN3P51790 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.31□□□□□ -1.72
CLCN3P51790 OSBPL9P5-201ENST00000542581 171 ntBASIC4.31□□□□□ -1.72
CLCN3P51790 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLCN3P51790 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.31□□□□□ -1.72
CLCN3P51790 EIF5A2P1-201ENST00000564027 460 ntBASIC4.31□□□□□ -1.72
CLCN3P51790 AC074051.3-201ENST00000570238 358 ntBASIC4.31□□□□□ -1.72
CLCN3P51790 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC4.31□□□□□ -1.72
CLCN3P51790 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.31□□□□□ -1.72
CLCN3P51790 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.31□□□□□ -1.72
CLCN3P51790 AC091057.2-201ENST00000602594 792 ntBASIC4.31□□□□□ -1.72
CLCN3P51790 AC021171.1-201ENST00000603137 706 ntBASIC4.31□□□□□ -1.72
CLCN3P51790 AC080013.6-201ENST00000606185 215 ntBASIC4.31□□□□□ -1.72
CLCN3P51790 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.31□□□□□ -1.72
CLCN3P51790 AC107075.1-201ENST00000613695 314 ntBASIC4.31□□□□□ -1.72
CLCN3P51790 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.31□□□□□ -1.72
CLCN3P51790 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.31□□□□□ -1.72
CLCN3P51790 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
CLCN3P51790 MTND5P28-201ENST00000438005 1594 ntBASIC4.31□□□□□ -1.72
CLCN3P51790 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLCN3P51790 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLCN3P51790 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.3□□□□□ -1.72
CLCN3P51790 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLCN3P51790 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
CLCN3P51790 OR5H2-201ENST00000355273 945 ntBASIC4.3□□□□□ -1.72
CLCN3P51790 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CLCN3P51790 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.3□□□□□ -1.72
CLCN3P51790 U1.1-201ENST00000384101 164 ntBASIC4.3□□□□□ -1.72
CLCN3P51790 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
CLCN3P51790 SNORA57.3-201ENST00000411095 141 ntBASIC4.3□□□□□ -1.72
CLCN3P51790 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
CLCN3P51790 FCF1P2-201ENST00000415284 583 ntBASIC4.3□□□□□ -1.72
CLCN3P51790 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.3□□□□□ -1.72
CLCN3P51790 RPS3AP9-201ENST00000417027 792 ntBASIC4.3□□□□□ -1.72
CLCN3P51790 AL365338.1-201ENST00000422282 858 ntBASIC4.3□□□□□ -1.72
CLCN3P51790 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.3□□□□□ -1.72
CLCN3P51790 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.3□□□□□ -1.72
CLCN3P51790 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.3□□□□□ -1.72
CLCN3P51790 Z74696.2-201ENST00000436514 498 ntBASIC4.3□□□□□ -1.72
CLCN3P51790 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.3□□□□□ -1.72
CLCN3P51790 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.3□□□□□ -1.72
CLCN3P51790 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.3□□□□□ -1.72
CLCN3P51790 NANOGP10-201ENST00000453325 895 ntBASIC4.3□□□□□ -1.72
CLCN3P51790 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.3□□□□□ -1.72
CLCN3P51790 MTATP6P22-201ENST00000507369 598 ntBASIC4.3□□□□□ -1.72
CLCN3P51790 AC034244.1-201ENST00000507687 207 ntBASIC4.3□□□□□ -1.72
CLCN3P51790 AC110792.2-201ENST00000510278 224 ntBASIC4.3□□□□□ -1.72
CLCN3P51790 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.3□□□□□ -1.72
CLCN3P51790 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.3□□□□□ -1.72
CLCN3P51790 AP001189.2-201ENST00000527320 189 ntBASIC4.3□□□□□ -1.72
CLCN3P51790 AP000619.3-201ENST00000535634 1127 ntBASIC4.3□□□□□ -1.72
CLCN3P51790 AC005832.3-201ENST00000537929 631 ntBASIC4.3□□□□□ -1.72
CLCN3P51790 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.3□□□□□ -1.72
CLCN3P51790 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.3□□□□□ -1.72
CLCN3P51790 ZNF321P-202ENST00000550843 495 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms