Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 MTND1P29-201ENST00000448112 647 ntBASIC3.58□□□□□ -1.84
NKX2-1P43699 AL121877.1-201ENST00000453704 622 ntBASIC3.58□□□□□ -1.84
NKX2-1P43699 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC3.58□□□□□ -1.84
NKX2-1P43699 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.58□□□□□ -1.84
NKX2-1P43699 RPL7P22-201ENST00000466005 733 ntBASIC3.58□□□□□ -1.84
NKX2-1P43699 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NKX2-1P43699 BZW1P2-201ENST00000473537 826 ntBASIC3.58□□□□□ -1.84
NKX2-1P43699 RPS26P15-201ENST00000488067 348 ntBASIC3.58□□□□□ -1.84
NKX2-1P43699 AC005178.1-201ENST00000508392 440 ntBASIC3.58□□□□□ -1.84
NKX2-1P43699 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.58□□□□□ -1.84
NKX2-1P43699 MTCO3P44-201ENST00000510977 541 ntBASIC3.58□□□□□ -1.84
NKX2-1P43699 AC006499.2-201ENST00000513470 337 ntBASIC3.58□□□□□ -1.84
NKX2-1P43699 ATG10-208ENST00000513634 618 ntTSL 2 BASIC3.58□□□□□ -1.84
NKX2-1P43699 RNU6ATAC24P-201ENST00000516811 135 ntBASIC3.58□□□□□ -1.84
NKX2-1P43699 AC104986.1-201ENST00000517978 436 ntBASIC3.58□□□□□ -1.84
NKX2-1P43699 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.58□□□□□ -1.84
NKX2-1P43699 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NKX2-1P43699 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.58□□□□□ -1.84
NKX2-1P43699 AC087373.1-201ENST00000524920 491 ntBASIC3.58□□□□□ -1.84
NKX2-1P43699 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.58□□□□□ -1.84
NKX2-1P43699 AP000676.2-201ENST00000529711 301 ntBASIC3.58□□□□□ -1.84
NKX2-1P43699 AC008033.2-201ENST00000542626 177 ntBASIC3.58□□□□□ -1.84
NKX2-1P43699 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.58□□□□□ -1.84
NKX2-1P43699 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC3.58□□□□□ -1.84
NKX2-1P43699 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.58□□□□□ -1.84
NKX2-1P43699 AC107954.1-201ENST00000565906 727 ntBASIC3.58□□□□□ -1.84
NKX2-1P43699 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.58□□□□□ -1.84
NKX2-1P43699 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.58□□□□□ -1.84
NKX2-1P43699 AC104785.1-201ENST00000603220 588 ntBASIC3.58□□□□□ -1.84
NKX2-1P43699 AC018714.1-201ENST00000605028 208 ntBASIC3.58□□□□□ -1.84
NKX2-1P43699 AC006270.3-201ENST00000605967 1036 ntBASIC3.58□□□□□ -1.84
NKX2-1P43699 AC012603.1-201ENST00000606424 528 ntBASIC3.58□□□□□ -1.84
NKX2-1P43699 AC016769.4-201ENST00000616893 535 ntBASIC3.58□□□□□ -1.84
NKX2-1P43699 AC018816.2-201ENST00000621460 353 ntBASIC3.58□□□□□ -1.84
NKX2-1P43699 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
NKX2-1P43699 AC109780.1-201ENST00000451768 1344 ntBASIC3.58□□□□□ -1.84
NKX2-1P43699 OR5BR1P-201ENST00000524992 1330 ntBASIC3.58□□□□□ -1.84
NKX2-1P43699 AC021755.1-201ENST00000559747 1447 ntBASIC3.58□□□□□ -1.84
NKX2-1P43699 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
NKX2-1P43699 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.58□□□□□ -1.84
NKX2-1P43699 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NKX2-1P43699 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NKX2-1P43699 ZNF962P-201ENST00000443465 3140 ntBASIC3.58□□□□□ -1.84
NKX2-1P43699 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
NKX2-1P43699 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.58□□□□□ -1.84
NKX2-1P43699 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NKX2-1P43699 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
NKX2-1P43699 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NKX2-1P43699 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.57□□□□□ -1.84
NKX2-1P43699 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NKX2-1P43699 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NKX2-1P43699 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NKX2-1P43699 RNA5SP123-201ENST00000363244 119 ntBASIC3.57□□□□□ -1.84
NKX2-1P43699 SNORD82-201ENST00000365530 70 ntBASIC3.57□□□□□ -1.84
NKX2-1P43699 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NKX2-1P43699 SNORD116-9-201ENST00000384000 95 ntBASIC3.57□□□□□ -1.84
NKX2-1P43699 RNU6-761P-201ENST00000384148 107 ntBASIC3.57□□□□□ -1.84
NKX2-1P43699 SNORD116-3-201ENST00000384287 95 ntBASIC3.57□□□□□ -1.84
NKX2-1P43699 SNORD116-7-201ENST00000384404 95 ntBASIC3.57□□□□□ -1.84
NKX2-1P43699 SNORD116-5-201ENST00000384462 95 ntBASIC3.57□□□□□ -1.84
NKX2-1P43699 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
NKX2-1P43699 AL121972.1-201ENST00000402023 252 ntBASIC3.57□□□□□ -1.84
NKX2-1P43699 RNA5SP306-201ENST00000411087 107 ntBASIC3.57□□□□□ -1.84
NKX2-1P43699 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.57□□□□□ -1.84
NKX2-1P43699 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.57□□□□□ -1.84
NKX2-1P43699 RPL23AP39-201ENST00000415533 405 ntBASIC3.57□□□□□ -1.84
NKX2-1P43699 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.57□□□□□ -1.84
NKX2-1P43699 Z99497.1-201ENST00000421282 135 ntBASIC3.57□□□□□ -1.84
NKX2-1P43699 AL035410.1-201ENST00000427409 427 ntBASIC3.57□□□□□ -1.84
NKX2-1P43699 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.57□□□□□ -1.84
NKX2-1P43699 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.57□□□□□ -1.84
NKX2-1P43699 RPEP2-201ENST00000432149 701 ntBASIC3.57□□□□□ -1.84
NKX2-1P43699 AC016831.4-201ENST00000438302 307 ntBASIC3.57□□□□□ -1.84
NKX2-1P43699 AC127537.2-201ENST00000439258 465 ntBASIC3.57□□□□□ -1.84
NKX2-1P43699 ARPC3P5-201ENST00000448802 534 ntBASIC3.57□□□□□ -1.84
NKX2-1P43699 EIF4EBP2P1-201ENST00000450009 343 ntBASIC3.57□□□□□ -1.84
NKX2-1P43699 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.57□□□□□ -1.84
NKX2-1P43699 AP000926.1-201ENST00000479573 241 ntBASIC3.57□□□□□ -1.84
NKX2-1P43699 AC090453.1-201ENST00000495560 436 ntBASIC3.57□□□□□ -1.84
NKX2-1P43699 RN7SL808P-201ENST00000496066 299 ntBASIC3.57□□□□□ -1.84
NKX2-1P43699 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.57□□□□□ -1.84
NKX2-1P43699 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.57□□□□□ -1.84
NKX2-1P43699 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NKX2-1P43699 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NKX2-1P43699 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.57□□□□□ -1.84
NKX2-1P43699 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.57□□□□□ -1.84
NKX2-1P43699 RNU6-678P-201ENST00000516832 109 ntBASIC3.57□□□□□ -1.84
NKX2-1P43699 DEFB131D-201ENST00000526803 184 ntBASIC3.57□□□□□ -1.84
NKX2-1P43699 AL110118.1-201ENST00000553543 400 ntBASIC3.57□□□□□ -1.84
NKX2-1P43699 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.57□□□□□ -1.84
NKX2-1P43699 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC3.57□□□□□ -1.84
NKX2-1P43699 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NKX2-1P43699 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.57□□□□□ -1.84
NKX2-1P43699 BGLT3-201ENST00000564523 994 ntBASIC3.57□□□□□ -1.84
NKX2-1P43699 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.57□□□□□ -1.84
NKX2-1P43699 KARSP3-201ENST00000571212 1504 ntBASIC3.57□□□□□ -1.84
NKX2-1P43699 MIR4646-201ENST00000580775 63 ntBASIC3.57□□□□□ -1.84
NKX2-1P43699 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.57□□□□□ -1.84
NKX2-1P43699 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.57□□□□□ -1.84
NKX2-1P43699 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms