Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AC005002.1-201ENST00000447458 540 ntBASIC4.1□□□□□ -1.75
RFC4P35249 MRPL35P4-201ENST00000453682 566 ntBASIC4.1□□□□□ -1.75
RFC4P35249 RPL9P32-201ENST00000464118 620 ntBASIC4.1□□□□□ -1.75
RFC4P35249 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RFC4P35249 HMGB1P47-201ENST00000511281 589 ntBASIC4.1□□□□□ -1.75
RFC4P35249 SNORA70.14-201ENST00000516205 110 ntBASIC4.1□□□□□ -1.75
RFC4P35249 AL133457.1-201ENST00000564251 987 ntBASIC4.1□□□□□ -1.75
RFC4P35249 MIR4644-201ENST00000579929 84 ntBASIC4.1□□□□□ -1.75
RFC4P35249 UBL5P2-201ENST00000583788 219 ntBASIC4.1□□□□□ -1.75
RFC4P35249 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.1□□□□□ -1.75
RFC4P35249 BNIP3P38-201ENST00000601117 544 ntBASIC4.1□□□□□ -1.75
RFC4P35249 AC015849.2-201ENST00000605738 409 ntBASIC4.1□□□□□ -1.75
RFC4P35249 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.1□□□□□ -1.75
RFC4P35249 AC022149.2-201ENST00000621061 203 ntBASIC4.1□□□□□ -1.75
RFC4P35249 AC103858.2-201ENST00000621471 543 ntBASIC4.1□□□□□ -1.75
RFC4P35249 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.1□□□□□ -1.75
RFC4P35249 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.1□□□□□ -1.75
RFC4P35249 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.1□□□□□ -1.75
RFC4P35249 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RFC4P35249 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
RFC4P35249 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RFC4P35249 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.09□□□□□ -1.75
RFC4P35249 AC233263.6-201ENST00000631132 1963 ntBASIC4.09□□□□□ -1.75
RFC4P35249 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.09□□□□□ -1.75
RFC4P35249 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RFC4P35249 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RFC4P35249 MIR449A-201ENST00000362113 91 ntBASIC4.09□□□□□ -1.75
RFC4P35249 RNA5SP322-201ENST00000363617 119 ntBASIC4.09□□□□□ -1.75
RFC4P35249 SNORA7.4-201ENST00000384249 137 ntBASIC4.09□□□□□ -1.75
RFC4P35249 RNU6-452P-201ENST00000384406 107 ntBASIC4.09□□□□□ -1.75
RFC4P35249 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.09□□□□□ -1.75
RFC4P35249 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.09□□□□□ -1.75
RFC4P35249 RPL34P26-201ENST00000445636 354 ntBASIC4.09□□□□□ -1.75
RFC4P35249 RPL23AP67-201ENST00000465341 474 ntBASIC4.09□□□□□ -1.75
RFC4P35249 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.09□□□□□ -1.75
RFC4P35249 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.09□□□□□ -1.75
RFC4P35249 AC009812.2-201ENST00000517657 457 ntBASIC4.09□□□□□ -1.75
RFC4P35249 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.09□□□□□ -1.75
RFC4P35249 AC087276.1-201ENST00000529659 480 ntBASIC4.09□□□□□ -1.75
RFC4P35249 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.09□□□□□ -1.75
RFC4P35249 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.09□□□□□ -1.75
RFC4P35249 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.09□□□□□ -1.75
RFC4P35249 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.09□□□□□ -1.75
RFC4P35249 AC069304.3-201ENST00000603938 1084 ntBASIC4.09□□□□□ -1.75
RFC4P35249 RNA5SP108-201ENST00000605921 117 ntBASIC4.09□□□□□ -1.75
RFC4P35249 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.09□□□□□ -1.75
RFC4P35249 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.09□□□□□ -1.75
RFC4P35249 MTND4P31-201ENST00000425607 1343 ntBASIC4.09□□□□□ -1.75
RFC4P35249 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.09□□□□□ -1.75
RFC4P35249 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
RFC4P35249 AC066616.2-201ENST00000559334 1481 ntBASIC4.09□□□□□ -1.75
RFC4P35249 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
RFC4P35249 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
RFC4P35249 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RFC4P35249 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RFC4P35249 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RFC4P35249 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.08□□□□□ -1.76
RFC4P35249 RNU6-283P-201ENST00000364788 107 ntBASIC4.08□□□□□ -1.76
RFC4P35249 RNU6-356P-201ENST00000384140 107 ntBASIC4.08□□□□□ -1.76
RFC4P35249 AC126124.2-201ENST00000413542 321 ntBASIC4.08□□□□□ -1.76
RFC4P35249 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.08□□□□□ -1.76
RFC4P35249 AC234782.4-201ENST00000417646 1048 ntBASIC4.08□□□□□ -1.76
RFC4P35249 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.08□□□□□ -1.76
RFC4P35249 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.08□□□□□ -1.76
RFC4P35249 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.08□□□□□ -1.76
RFC4P35249 AC114878.1-201ENST00000441166 358 ntBASIC4.08□□□□□ -1.76
RFC4P35249 EXTL2P1-201ENST00000446218 416 ntBASIC4.08□□□□□ -1.76
RFC4P35249 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RFC4P35249 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RFC4P35249 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.08□□□□□ -1.76
RFC4P35249 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.08□□□□□ -1.76
RFC4P35249 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.08□□□□□ -1.76
RFC4P35249 NDUFB4P9-201ENST00000511646 388 ntBASIC4.08□□□□□ -1.76
RFC4P35249 AC010374.2-201ENST00000512933 535 ntBASIC4.08□□□□□ -1.76
RFC4P35249 RNU2-58P-201ENST00000516403 183 ntBASIC4.08□□□□□ -1.76
RFC4P35249 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.08□□□□□ -1.76
RFC4P35249 OR5AP1P-201ENST00000529730 940 ntBASIC4.08□□□□□ -1.76
RFC4P35249 AC091515.1-201ENST00000548110 679 ntBASIC4.08□□□□□ -1.76
RFC4P35249 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.08□□□□□ -1.76
RFC4P35249 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.08□□□□□ -1.76
RFC4P35249 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.08□□□□□ -1.76
RFC4P35249 MIR2682-201ENST00000580305 110 ntBASIC4.08□□□□□ -1.76
RFC4P35249 AC105227.2-201ENST00000615075 605 ntBASIC4.08□□□□□ -1.76
RFC4P35249 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC4.08□□□□□ -1.76
RFC4P35249 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.08□□□□□ -1.76
RFC4P35249 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.07□□□□□ -1.76
RFC4P35249 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
RFC4P35249 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
RFC4P35249 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RFC4P35249 USP8P1-201ENST00000494673 3183 ntBASIC4.07□□□□□ -1.76
RFC4P35249 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
RFC4P35249 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
RFC4P35249 ZNF603P-201ENST00000405613 487 ntBASIC4.07□□□□□ -1.76
RFC4P35249 HNRNPDP2-201ENST00000406475 478 ntBASIC4.07□□□□□ -1.76
RFC4P35249 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.07□□□□□ -1.76
RFC4P35249 AL445528.1-201ENST00000426330 420 ntBASIC4.07□□□□□ -1.76
RFC4P35249 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RFC4P35249 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.07□□□□□ -1.76
RFC4P35249 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC4.07□□□□□ -1.76
RFC4P35249 RPS20P32-201ENST00000456044 356 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms