Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXC13P31276 AC074051.3-201ENST00000570238 358 ntBASIC4.23□□□□□ -1.73
HOXC13P31276 MTATP6P24-201ENST00000576835 677 ntBASIC4.23□□□□□ -1.73
HOXC13P31276 MIR3690-201ENST00000580266 75 ntBASIC4.23□□□□□ -1.73
HOXC13P31276 AP001542.2-201ENST00000593141 364 ntBASIC4.23□□□□□ -1.73
HOXC13P31276 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.23□□□□□ -1.73
HOXC13P31276 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.23□□□□□ -1.73
HOXC13P31276 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.23□□□□□ -1.73
HOXC13P31276 AC009974.1-201ENST00000608881 455 ntBASIC4.23□□□□□ -1.73
HOXC13P31276 AC105227.2-201ENST00000615075 605 ntBASIC4.23□□□□□ -1.73
HOXC13P31276 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.23□□□□□ -1.73
HOXC13P31276 AL512427.1-201ENST00000618593 349 ntBASIC4.23□□□□□ -1.73
HOXC13P31276 AC006386.1-201ENST00000619436 415 ntBASIC4.23□□□□□ -1.73
HOXC13P31276 AC007275.1-201ENST00000621243 671 ntBASIC4.23□□□□□ -1.73
HOXC13P31276 AL357559.1-201ENST00000622228 274 ntBASIC4.23□□□□□ -1.73
HOXC13P31276 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.23□□□□□ -1.73
HOXC13P31276 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.23□□□□□ -1.73
HOXC13P31276 AP003485.1-201ENST00000625093 753 ntBASIC4.23□□□□□ -1.73
HOXC13P31276 AC126544.2-201ENST00000625174 749 ntBASIC4.23□□□□□ -1.73
HOXC13P31276 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.23□□□□□ -1.73
HOXC13P31276 AC099654.9-201ENST00000637055 678 ntBASIC4.23□□□□□ -1.73
HOXC13P31276 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.23□□□□□ -1.73
HOXC13P31276 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.23□□□□□ -1.73
HOXC13P31276 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXC13P31276 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXC13P31276 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXC13P31276 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HOXC13P31276 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
HOXC13P31276 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXC13P31276 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXC13P31276 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.22□□□□□ -1.73
HOXC13P31276 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXC13P31276 RNA5SP52-201ENST00000362448 134 ntBASIC4.22□□□□□ -1.73
HOXC13P31276 MIR200C-201ENST00000384980 68 ntBASIC4.22□□□□□ -1.73
HOXC13P31276 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.22□□□□□ -1.73
HOXC13P31276 PGBD4P8-201ENST00000412993 562 ntBASIC4.22□□□□□ -1.73
HOXC13P31276 HSFY4P-201ENST00000415994 1181 ntBASIC4.22□□□□□ -1.73
HOXC13P31276 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXC13P31276 AL513174.1-201ENST00000423182 629 ntBASIC4.22□□□□□ -1.73
HOXC13P31276 AL358472.1-201ENST00000431295 329 ntBASIC4.22□□□□□ -1.73
HOXC13P31276 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXC13P31276 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXC13P31276 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXC13P31276 MTND1P31-201ENST00000449206 961 ntBASIC4.22□□□□□ -1.73
HOXC13P31276 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXC13P31276 ACTR3P3-201ENST00000480448 893 ntBASIC4.22□□□□□ -1.73
HOXC13P31276 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXC13P31276 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.22□□□□□ -1.73
HOXC13P31276 AC008427.1-201ENST00000503102 655 ntBASIC4.22□□□□□ -1.73
HOXC13P31276 AC025554.1-201ENST00000505641 188 ntBASIC4.22□□□□□ -1.73
HOXC13P31276 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXC13P31276 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXC13P31276 MTCO2P32-201ENST00000514865 403 ntBASIC4.22□□□□□ -1.73
HOXC13P31276 IGKV2-23-201ENST00000518729 323 ntBASIC4.22□□□□□ -1.73
HOXC13P31276 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXC13P31276 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.22□□□□□ -1.73
HOXC13P31276 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.22□□□□□ -1.73
HOXC13P31276 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.22□□□□□ -1.73
HOXC13P31276 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.22□□□□□ -1.73
HOXC13P31276 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXC13P31276 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXC13P31276 AC009101.1-201ENST00000568135 242 ntBASIC4.22□□□□□ -1.73
HOXC13P31276 AC079171.1-201ENST00000568788 914 ntBASIC4.22□□□□□ -1.73
HOXC13P31276 AC120057.2-201ENST00000571520 271 ntBASIC4.22□□□□□ -1.73
HOXC13P31276 MIR3200-201ENST00000580767 85 ntBASIC4.22□□□□□ -1.73
HOXC13P31276 AF131215.7-201ENST00000602443 707 ntBASIC4.22□□□□□ -1.73
HOXC13P31276 AC008739.3-201ENST00000603262 127 ntBASIC4.22□□□□□ -1.73
HOXC13P31276 AC025811.1-201ENST00000604312 472 ntBASIC4.22□□□□□ -1.73
HOXC13P31276 AL390816.3-201ENST00000604527 1066 ntBASIC4.22□□□□□ -1.73
HOXC13P31276 RNU6-1192P-201ENST00000612197 107 ntBASIC4.22□□□□□ -1.73
HOXC13P31276 RNU6-489P-201ENST00000618289 107 ntBASIC4.22□□□□□ -1.73
HOXC13P31276 AC068722.2-201ENST00000618734 544 ntBASIC4.22□□□□□ -1.73
HOXC13P31276 AL049777.1-201ENST00000622740 518 ntBASIC4.22□□□□□ -1.73
HOXC13P31276 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXC13P31276 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXC13P31276 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.22□□□□□ -1.73
HOXC13P31276 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
HOXC13P31276 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXC13P31276 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
HOXC13P31276 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.21□□□□□ -1.73
HOXC13P31276 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HOXC13P31276 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HOXC13P31276 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
HOXC13P31276 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
HOXC13P31276 SNORA60-201ENST00000362396 134 ntBASIC4.21□□□□□ -1.74
HOXC13P31276 RNU6-236P-201ENST00000363886 106 ntBASIC4.21□□□□□ -1.74
HOXC13P31276 RNU6-1257P-201ENST00000384625 110 ntBASIC4.21□□□□□ -1.74
HOXC13P31276 AL590704.1-201ENST00000402856 794 ntBASIC4.21□□□□□ -1.74
HOXC13P31276 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.21□□□□□ -1.74
HOXC13P31276 VPS26BP1-201ENST00000417155 755 ntBASIC4.21□□□□□ -1.74
HOXC13P31276 AC091286.1-201ENST00000431233 461 ntBASIC4.21□□□□□ -1.74
HOXC13P31276 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.21□□□□□ -1.74
HOXC13P31276 CETN4P-201ENST00000432407 469 ntBASIC4.21□□□□□ -1.74
HOXC13P31276 AC011242.1-201ENST00000433596 1158 ntBASIC4.21□□□□□ -1.74
HOXC13P31276 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.21□□□□□ -1.74
HOXC13P31276 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.21□□□□□ -1.74
HOXC13P31276 RPL7P59-201ENST00000447700 943 ntBASIC4.21□□□□□ -1.74
HOXC13P31276 PRSS3P4-201ENST00000453323 162 ntBASIC4.21□□□□□ -1.74
HOXC13P31276 AL122001.1-201ENST00000457027 370 ntBASIC4.21□□□□□ -1.74
HOXC13P31276 RPL38P1-201ENST00000460914 211 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 163.4 ms