Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CLIP1P30622 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
CLIP1P30622 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CLIP1P30622 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLIP1P30622 XGY1-201ENST00000381172 446 ntBASIC4.39□□□□□ -1.71
CLIP1P30622 SNORA68.2-201ENST00000391263 128 ntBASIC4.39□□□□□ -1.71
CLIP1P30622 RNU2-52P-201ENST00000410680 190 ntBASIC4.39□□□□□ -1.71
CLIP1P30622 MRPL50P2-201ENST00000416821 482 ntBASIC4.39□□□□□ -1.71
CLIP1P30622 RPS15AP6-201ENST00000420703 385 ntBASIC4.39□□□□□ -1.71
CLIP1P30622 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.39□□□□□ -1.71
CLIP1P30622 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.39□□□□□ -1.71
CLIP1P30622 MTND6P18-201ENST00000439477 513 ntBASIC4.39□□□□□ -1.71
CLIP1P30622 RPS3P1-201ENST00000456781 192 ntBASIC4.39□□□□□ -1.71
CLIP1P30622 AC091544.1-201ENST00000484702 348 ntBASIC4.39□□□□□ -1.71
CLIP1P30622 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.39□□□□□ -1.71
CLIP1P30622 AL157394.1-201ENST00000562983 1224 ntBASIC4.39□□□□□ -1.71
CLIP1P30622 AL137072.1-201ENST00000603444 466 ntBASIC4.39□□□□□ -1.71
CLIP1P30622 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLIP1P30622 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
CLIP1P30622 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLIP1P30622 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC4.39□□□□□ -1.71
CLIP1P30622 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.38□□□□□ -1.71
CLIP1P30622 AL356057.3-201ENST00000402607 340 ntBASIC4.38□□□□□ -1.71
CLIP1P30622 AL139095.1-201ENST00000404326 391 ntBASIC4.38□□□□□ -1.71
CLIP1P30622 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.38□□□□□ -1.71
CLIP1P30622 AC112220.1-201ENST00000434628 355 ntBASIC4.38□□□□□ -1.71
CLIP1P30622 AC245517.2-201ENST00000442890 346 ntBASIC4.38□□□□□ -1.71
CLIP1P30622 AC074140.1-201ENST00000621617 208 ntBASIC4.38□□□□□ -1.71
CLIP1P30622 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLIP1P30622 AC104446.1-201ENST00000613728 1321 ntBASIC4.38□□□□□ -1.71
CLIP1P30622 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CLIP1P30622 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.38□□□□□ -1.71
CLIP1P30622 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLIP1P30622 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLIP1P30622 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.38□□□□□ -1.71
CLIP1P30622 VDAC1P3-201ENST00000434069 851 ntBASIC4.38□□□□□ -1.71
CLIP1P30622 FTH1P1-201ENST00000437933 532 ntBASIC4.38□□□□□ -1.71
CLIP1P30622 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.38□□□□□ -1.71
CLIP1P30622 NPM1P35-201ENST00000533043 868 ntBASIC4.38□□□□□ -1.71
CLIP1P30622 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.38□□□□□ -1.71
CLIP1P30622 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.38□□□□□ -1.71
CLIP1P30622 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.38□□□□□ -1.71
CLIP1P30622 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.37□□□□□ -1.71
CLIP1P30622 TAB3P1-202ENST00000452645 1634 ntBASIC4.37□□□□□ -1.71
CLIP1P30622 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CLIP1P30622 MIR181B1-201ENST00000385240 110 ntBASIC4.37□□□□□ -1.71
CLIP1P30622 AC007563.3-201ENST00000433233 371 ntBASIC4.37□□□□□ -1.71
CLIP1P30622 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.37□□□□□ -1.71
CLIP1P30622 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.37□□□□□ -1.71
CLIP1P30622 AC078817.1-201ENST00000492623 435 ntBASIC4.37□□□□□ -1.71
CLIP1P30622 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.37□□□□□ -1.71
CLIP1P30622 OR4C2P-201ENST00000530855 1064 ntBASIC4.37□□□□□ -1.71
CLIP1P30622 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.37□□□□□ -1.71
CLIP1P30622 AC083760.1-201ENST00000589621 670 ntBASIC4.37□□□□□ -1.71
CLIP1P30622 AL020991.1-201ENST00000612314 373 ntBASIC4.37□□□□□ -1.71
CLIP1P30622 AP004607.9-201ENST00000618202 316 ntBASIC4.37□□□□□ -1.71
CLIP1P30622 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.37□□□□□ -1.71
CLIP1P30622 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.36□□□□□ -1.71
CLIP1P30622 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLIP1P30622 MIR26A1-201ENST00000362205 77 ntBASIC4.36□□□□□ -1.71
CLIP1P30622 MIR196B-201ENST00000384852 84 ntBASIC4.36□□□□□ -1.71
CLIP1P30622 RNU6ATAC40P-201ENST00000408580 137 ntBASIC4.36□□□□□ -1.71
CLIP1P30622 AP000936.2-201ENST00000447151 681 ntBASIC4.36□□□□□ -1.71
CLIP1P30622 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.36□□□□□ -1.71
CLIP1P30622 HPRT1P3-201ENST00000539521 576 ntBASIC4.36□□□□□ -1.71
CLIP1P30622 AC009097.3-201ENST00000563557 1018 ntBASIC4.36□□□□□ -1.71
CLIP1P30622 AC234778.2-201ENST00000566241 354 ntBASIC4.36□□□□□ -1.71
CLIP1P30622 ZNF861P-201ENST00000588126 639 ntBASIC4.36□□□□□ -1.71
CLIP1P30622 AC087468.1-201ENST00000604365 630 ntBASIC4.36□□□□□ -1.71
CLIP1P30622 AP001005.3-201ENST00000622049 129 ntBASIC4.36□□□□□ -1.71
CLIP1P30622 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLIP1P30622 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLIP1P30622 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CLIP1P30622 RPS20P5-201ENST00000434808 360 ntBASIC4.35□□□□□ -1.71
CLIP1P30622 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.35□□□□□ -1.71
CLIP1P30622 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.35□□□□□ -1.71
CLIP1P30622 MRPL35P4-201ENST00000453682 566 ntBASIC4.35□□□□□ -1.71
CLIP1P30622 AC128713.1-201ENST00000471495 306 ntBASIC4.35□□□□□ -1.71
CLIP1P30622 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.35□□□□□ -1.71
CLIP1P30622 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLIP1P30622 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLIP1P30622 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CLIP1P30622 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.34□□□□□ -1.71
CLIP1P30622 RAD1P1-201ENST00000231383 813 ntBASIC4.34□□□□□ -1.71
CLIP1P30622 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CLIP1P30622 MIR3074-201ENST00000384885 81 ntBASIC4.34□□□□□ -1.71
CLIP1P30622 AL139039.1-201ENST00000401900 692 ntBASIC4.34□□□□□ -1.71
CLIP1P30622 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.34□□□□□ -1.71
CLIP1P30622 AL592437.1-201ENST00000443781 492 ntBASIC4.34□□□□□ -1.71
CLIP1P30622 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.34□□□□□ -1.71
CLIP1P30622 AC091544.4-201ENST00000555268 342 ntBASIC4.34□□□□□ -1.71
CLIP1P30622 AC122134.1-201ENST00000565664 1104 ntBASIC4.34□□□□□ -1.71
CLIP1P30622 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.34□□□□□ -1.71
CLIP1P30622 AC026790.2-201ENST00000606282 430 ntBASIC4.34□□□□□ -1.71
CLIP1P30622 AC004832.5-201ENST00000608677 401 ntBASIC4.34□□□□□ -1.71
CLIP1P30622 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.34□□□□□ -1.71
CLIP1P30622 AC243829.7-201ENST00000633081 225 ntBASIC4.34□□□□□ -1.71
CLIP1P30622 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CLIP1P30622 MTND5P19-201ENST00000424872 1794 ntBASIC4.34□□□□□ -1.71
CLIP1P30622 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms