Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.43□□□□□ -1.7
BDNFP23560 MIR6867-201ENST00000610636 67 ntBASIC4.43□□□□□ -1.7
BDNFP23560 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.43□□□□□ -1.7
BDNFP23560 XIST_intron.1-201ENST00000619444 68 ntBASIC4.43□□□□□ -1.7
BDNFP23560 AC112484.5-201ENST00000624189 228 ntBASIC4.43□□□□□ -1.7
BDNFP23560 AC091925.2-201ENST00000625059 256 ntBASIC4.43□□□□□ -1.7
BDNFP23560 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.43□□□□□ -1.7
BDNFP23560 RNA5SP196-201ENST00000625967 102 ntBASIC4.43□□□□□ -1.7
BDNFP23560 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.43□□□□□ -1.7
BDNFP23560 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
BDNFP23560 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.43□□□□□ -1.7
BDNFP23560 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
BDNFP23560 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
BDNFP23560 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
BDNFP23560 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
BDNFP23560 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
BDNFP23560 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
BDNFP23560 RNU1-15P-201ENST00000353977 144 ntBASIC4.42□□□□□ -1.7
BDNFP23560 MIR448-201ENST00000362131 111 ntBASIC4.42□□□□□ -1.7
BDNFP23560 RNA5SP130-201ENST00000364431 114 ntBASIC4.42□□□□□ -1.7
BDNFP23560 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
BDNFP23560 RNU11-4P-201ENST00000391149 133 ntBASIC4.42□□□□□ -1.7
BDNFP23560 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
BDNFP23560 ARF4P3-201ENST00000397387 509 ntBASIC4.42□□□□□ -1.7
BDNFP23560 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.42□□□□□ -1.7
BDNFP23560 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.42□□□□□ -1.7
BDNFP23560 AL356095.1-201ENST00000417217 199 ntBASIC4.42□□□□□ -1.7
BDNFP23560 RPL21P32-201ENST00000419877 477 ntBASIC4.42□□□□□ -1.7
BDNFP23560 AL137014.1-201ENST00000420490 1226 ntBASIC4.42□□□□□ -1.7
BDNFP23560 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.42□□□□□ -1.7
BDNFP23560 GLRXP1-201ENST00000423261 334 ntBASIC4.42□□□□□ -1.7
BDNFP23560 HMGB3P5-201ENST00000428894 612 ntBASIC4.42□□□□□ -1.7
BDNFP23560 SGO1P2-201ENST00000429458 1589 ntBASIC4.42□□□□□ -1.7
BDNFP23560 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.42□□□□□ -1.7
BDNFP23560 GTF2IP3-201ENST00000433887 494 ntBASIC4.42□□□□□ -1.7
BDNFP23560 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.42□□□□□ -1.7
BDNFP23560 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.42□□□□□ -1.7
BDNFP23560 Z95327.1-201ENST00000446082 482 ntBASIC4.42□□□□□ -1.7
BDNFP23560 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.42□□□□□ -1.7
BDNFP23560 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.42□□□□□ -1.7
BDNFP23560 NECAP1P2-201ENST00000455668 727 ntBASIC4.42□□□□□ -1.7
BDNFP23560 RNA5SP246-201ENST00000458909 119 ntBASIC4.42□□□□□ -1.7
BDNFP23560 FTH1P2-201ENST00000466086 412 ntBASIC4.42□□□□□ -1.7
BDNFP23560 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.42□□□□□ -1.7
BDNFP23560 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.42□□□□□ -1.7
BDNFP23560 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
BDNFP23560 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.42□□□□□ -1.7
BDNFP23560 KLHL2P1-201ENST00000508691 521 ntBASIC4.42□□□□□ -1.7
BDNFP23560 AC113347.3-201ENST00000509113 148 ntBASIC4.42□□□□□ -1.7
BDNFP23560 MTCYBP16-201ENST00000509187 1129 ntBASIC4.42□□□□□ -1.7
BDNFP23560 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.42□□□□□ -1.7
BDNFP23560 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.42□□□□□ -1.7
BDNFP23560 MIR2116-201ENST00000517221 80 ntBASIC4.42□□□□□ -1.7
BDNFP23560 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.42□□□□□ -1.7
BDNFP23560 IGLV3-26-201ENST00000520756 302 ntBASIC4.42□□□□□ -1.7
BDNFP23560 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.42□□□□□ -1.7
BDNFP23560 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.42□□□□□ -1.7
BDNFP23560 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.42□□□□□ -1.7
BDNFP23560 AL391156.1-201ENST00000554965 554 ntBASIC4.42□□□□□ -1.7
BDNFP23560 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.42□□□□□ -1.7
BDNFP23560 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.42□□□□□ -1.7
BDNFP23560 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
BDNFP23560 AL606834.3-201ENST00000602615 496 ntBASIC4.42□□□□□ -1.7
BDNFP23560 AC096947.1-201ENST00000603233 470 ntBASIC4.42□□□□□ -1.7
BDNFP23560 AC004987.4-201ENST00000603383 338 ntBASIC4.42□□□□□ -1.7
BDNFP23560 AC024060.1-201ENST00000607052 494 ntBASIC4.42□□□□□ -1.7
BDNFP23560 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
BDNFP23560 SCN1A-220ENST00000641603 12506 ntBASIC4.42□□□□□ -1.7
BDNFP23560 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
BDNFP23560 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
BDNFP23560 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
BDNFP23560 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
BDNFP23560 AL645568.2-201ENST00000432815 1337 ntBASIC4.42□□□□□ -1.7
BDNFP23560 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.42□□□□□ -1.7
BDNFP23560 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.41□□□□□ -1.7
BDNFP23560 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
BDNFP23560 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
BDNFP23560 SPRR2C-201ENST00000290702 219 ntBASIC4.41□□□□□ -1.7
BDNFP23560 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
BDNFP23560 MIR372-201ENST00000362225 67 ntBASIC4.41□□□□□ -1.7
BDNFP23560 RNU6-216P-201ENST00000363282 104 ntBASIC4.41□□□□□ -1.7
BDNFP23560 U1.1-201ENST00000384101 164 ntBASIC4.41□□□□□ -1.7
BDNFP23560 MIR591-201ENST00000385290 95 ntBASIC4.41□□□□□ -1.7
BDNFP23560 MIR1179-201ENST00000408703 91 ntBASIC4.41□□□□□ -1.7
BDNFP23560 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.41□□□□□ -1.7
BDNFP23560 LUZP4P1-201ENST00000415420 344 ntBASIC4.41□□□□□ -1.7
BDNFP23560 AC108032.1-201ENST00000416706 207 ntBASIC4.41□□□□□ -1.7
BDNFP23560 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.41□□□□□ -1.7
BDNFP23560 TCEA1P2-201ENST00000420496 906 ntBASIC4.41□□□□□ -1.7
BDNFP23560 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.41□□□□□ -1.7
BDNFP23560 AC092427.1-201ENST00000439177 601 ntBASIC4.41□□□□□ -1.7
BDNFP23560 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.41□□□□□ -1.7
BDNFP23560 RNF2P1-201ENST00000442955 1010 ntBASIC4.41□□□□□ -1.7
BDNFP23560 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.41□□□□□ -1.7
BDNFP23560 USP9YP34-201ENST00000453983 808 ntBASIC4.41□□□□□ -1.7
BDNFP23560 AL445669.2-201ENST00000454425 421 ntBASIC4.41□□□□□ -1.7
BDNFP23560 RPL23AP31-201ENST00000456160 467 ntBASIC4.41□□□□□ -1.7
BDNFP23560 SUMO2P2-201ENST00000456482 255 ntBASIC4.41□□□□□ -1.7
BDNFP23560 RNU7-170P-201ENST00000459303 61 ntBASIC4.41□□□□□ -1.7
BDNFP23560 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms