Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AL359073.1-201ENST00000448036 403 ntBASIC4.04□□□□□ -1.76
PDGFRAP16234 AL500522.2-201ENST00000448562 343 ntBASIC4.04□□□□□ -1.76
PDGFRAP16234 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PDGFRAP16234 RN7SL132P-201ENST00000478131 296 ntBASIC4.04□□□□□ -1.76
PDGFRAP16234 AC079203.1-201ENST00000487972 404 ntBASIC4.04□□□□□ -1.76
PDGFRAP16234 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
PDGFRAP16234 PRELID3BP6-201ENST00000503839 571 ntBASIC4.04□□□□□ -1.76
PDGFRAP16234 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.04□□□□□ -1.76
PDGFRAP16234 AC096571.1-202ENST00000506634 735 ntBASIC4.04□□□□□ -1.76
PDGFRAP16234 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.04□□□□□ -1.76
PDGFRAP16234 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.04□□□□□ -1.76
PDGFRAP16234 OR4A45P-201ENST00000529954 901 ntBASIC4.04□□□□□ -1.76
PDGFRAP16234 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.04□□□□□ -1.76
PDGFRAP16234 AC092470.1-201ENST00000546187 132 ntBASIC4.04□□□□□ -1.76
PDGFRAP16234 AC090877.1-201ENST00000561418 344 ntBASIC4.04□□□□□ -1.76
PDGFRAP16234 HSPE1P5-201ENST00000561489 272 ntBASIC4.04□□□□□ -1.76
PDGFRAP16234 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.04□□□□□ -1.76
PDGFRAP16234 AC093227.2-201ENST00000589357 285 ntBASIC4.04□□□□□ -1.76
PDGFRAP16234 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.04□□□□□ -1.76
PDGFRAP16234 AC096947.1-201ENST00000603233 470 ntBASIC4.04□□□□□ -1.76
PDGFRAP16234 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.04□□□□□ -1.76
PDGFRAP16234 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.04□□□□□ -1.76
PDGFRAP16234 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.04□□□□□ -1.76
PDGFRAP16234 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.04□□□□□ -1.76
PDGFRAP16234 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.04□□□□□ -1.76
PDGFRAP16234 AL359893.1-201ENST00000447628 1580 ntBASIC4.04□□□□□ -1.76
PDGFRAP16234 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
PDGFRAP16234 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PDGFRAP16234 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.04□□□□□ -1.76
PDGFRAP16234 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PDGFRAP16234 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PDGFRAP16234 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.03□□□□□ -1.76
PDGFRAP16234 SEPT7P7-201ENST00000420492 1301 ntBASIC4.03□□□□□ -1.76
PDGFRAP16234 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
PDGFRAP16234 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.03□□□□□ -1.76
PDGFRAP16234 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
PDGFRAP16234 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PDGFRAP16234 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PDGFRAP16234 RNU4-51P-201ENST00000364206 140 ntBASIC4.03□□□□□ -1.76
PDGFRAP16234 RNU6-224P-201ENST00000384055 107 ntBASIC4.03□□□□□ -1.76
PDGFRAP16234 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.03□□□□□ -1.76
PDGFRAP16234 RPL32P23-201ENST00000397237 405 ntBASIC4.03□□□□□ -1.76
PDGFRAP16234 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.03□□□□□ -1.76
PDGFRAP16234 MIR1250-201ENST00000408098 113 ntBASIC4.03□□□□□ -1.76
PDGFRAP16234 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.03□□□□□ -1.76
PDGFRAP16234 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.03□□□□□ -1.76
PDGFRAP16234 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.03□□□□□ -1.76
PDGFRAP16234 RPL31P54-201ENST00000429803 370 ntBASIC4.03□□□□□ -1.76
PDGFRAP16234 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.03□□□□□ -1.76
PDGFRAP16234 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.03□□□□□ -1.76
PDGFRAP16234 Z74696.2-201ENST00000436514 498 ntBASIC4.03□□□□□ -1.76
PDGFRAP16234 CDC27P1-201ENST00000445384 715 ntBASIC4.03□□□□□ -1.76
PDGFRAP16234 AL358794.1-201ENST00000445689 381 ntBASIC4.03□□□□□ -1.76
PDGFRAP16234 HMGB1P16-201ENST00000447155 540 ntBASIC4.03□□□□□ -1.76
PDGFRAP16234 COX6CP18-201ENST00000448769 222 ntBASIC4.03□□□□□ -1.76
PDGFRAP16234 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.03□□□□□ -1.76
PDGFRAP16234 snoU109.3-201ENST00000459477 145 ntBASIC4.03□□□□□ -1.76
PDGFRAP16234 VPS26AP1-201ENST00000483197 979 ntBASIC4.03□□□□□ -1.76
PDGFRAP16234 BOLA3P3-201ENST00000505182 232 ntBASIC4.03□□□□□ -1.76
PDGFRAP16234 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
PDGFRAP16234 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PDGFRAP16234 AC010342.1-201ENST00000514047 877 ntBASIC4.03□□□□□ -1.76
PDGFRAP16234 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.03□□□□□ -1.76
PDGFRAP16234 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.03□□□□□ -1.76
PDGFRAP16234 RNU6-352P-201ENST00000516908 107 ntBASIC4.03□□□□□ -1.76
PDGFRAP16234 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.03□□□□□ -1.76
PDGFRAP16234 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.03□□□□□ -1.76
PDGFRAP16234 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.03□□□□□ -1.76
PDGFRAP16234 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.03□□□□□ -1.76
PDGFRAP16234 MIR5708-201ENST00000579723 85 ntBASIC4.03□□□□□ -1.76
PDGFRAP16234 SNORD39.3-201ENST00000584451 71 ntBASIC4.03□□□□□ -1.76
PDGFRAP16234 AC090912.3-201ENST00000609775 533 ntBASIC4.03□□□□□ -1.76
PDGFRAP16234 AC123767.1-202ENST00000620407 817 ntBASIC4.03□□□□□ -1.76
PDGFRAP16234 AL354798.1-201ENST00000622505 329 ntBASIC4.03□□□□□ -1.76
PDGFRAP16234 FP236240.3-201ENST00000623061 327 ntBASIC4.03□□□□□ -1.76
PDGFRAP16234 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.03□□□□□ -1.76
PDGFRAP16234 AC026634.1-201ENST00000634369 198 ntBASIC4.03□□□□□ -1.76
PDGFRAP16234 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
PDGFRAP16234 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PDGFRAP16234 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PDGFRAP16234 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.03□□□□□ -1.76
PDGFRAP16234 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PDGFRAP16234 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.03□□□□□ -1.76
PDGFRAP16234 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.77
PDGFRAP16234 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.02□□□□□ -1.77
PDGFRAP16234 OR4A15-201ENST00000314706 1035 ntBASIC4.02□□□□□ -1.77
PDGFRAP16234 RNU6-1066P-201ENST00000363573 105 ntBASIC4.02□□□□□ -1.77
PDGFRAP16234 RNU6-925P-201ENST00000384629 104 ntBASIC4.02□□□□□ -1.77
PDGFRAP16234 HLFP1-201ENST00000402375 499 ntBASIC4.02□□□□□ -1.77
PDGFRAP16234 RSL24D1P1-201ENST00000404972 493 ntBASIC4.02□□□□□ -1.77
PDGFRAP16234 RNU2-37P-201ENST00000410695 177 ntBASIC4.02□□□□□ -1.77
PDGFRAP16234 CYCSP19-201ENST00000411715 316 ntBASIC4.02□□□□□ -1.77
PDGFRAP16234 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.02□□□□□ -1.77
PDGFRAP16234 RPL36AP36-201ENST00000418616 301 ntBASIC4.02□□□□□ -1.77
PDGFRAP16234 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.02□□□□□ -1.77
PDGFRAP16234 OFD1P18Y-201ENST00000420889 959 ntBASIC4.02□□□□□ -1.77
PDGFRAP16234 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.02□□□□□ -1.77
PDGFRAP16234 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.02□□□□□ -1.77
PDGFRAP16234 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.02□□□□□ -1.77
PDGFRAP16234 HMGN2P21-201ENST00000447764 270 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms