Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 MTND2P8-201ENST00000450555 1025 ntBASIC3.37□□□□□ -1.87
APOEP02649 snoU13.22-201ENST00000459428 104 ntBASIC3.37□□□□□ -1.87
APOEP02649 RPL21P103-201ENST00000479921 488 ntBASIC3.37□□□□□ -1.87
APOEP02649 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.37□□□□□ -1.87
APOEP02649 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.37□□□□□ -1.87
APOEP02649 POU5F1P7-201ENST00000508759 541 ntBASIC3.37□□□□□ -1.87
APOEP02649 AC005921.1-201ENST00000510589 286 ntBASIC3.37□□□□□ -1.87
APOEP02649 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.37□□□□□ -1.87
APOEP02649 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.37□□□□□ -1.87
APOEP02649 RN7SKP82-201ENST00000516786 223 ntBASIC3.37□□□□□ -1.87
APOEP02649 SCARNA20.6-201ENST00000517251 106 ntBASIC3.37□□□□□ -1.87
APOEP02649 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.37□□□□□ -1.87
APOEP02649 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.37□□□□□ -1.87
APOEP02649 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.37□□□□□ -1.87
APOEP02649 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.37□□□□□ -1.87
APOEP02649 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC3.37□□□□□ -1.87
APOEP02649 AC005951.1-201ENST00000576706 485 ntBASIC3.37□□□□□ -1.87
APOEP02649 ZNF415P1-201ENST00000582279 1166 ntBASIC3.37□□□□□ -1.87
APOEP02649 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.37□□□□□ -1.87
APOEP02649 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.37□□□□□ -1.87
APOEP02649 AC105429.2-201ENST00000610567 517 ntBASIC3.37□□□□□ -1.87
APOEP02649 MIR7112-201ENST00000616126 65 ntBASIC3.37□□□□□ -1.87
APOEP02649 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.37□□□□□ -1.87
APOEP02649 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.37□□□□□ -1.87
APOEP02649 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.37□□□□□ -1.87
APOEP02649 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.36□□□□□ -1.87
APOEP02649 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.36□□□□□ -1.87
APOEP02649 MTND5P7-201ENST00000413558 1798 ntBASIC3.36□□□□□ -1.87
APOEP02649 AC073346.2-201ENST00000624724 2058 ntBASIC3.36□□□□□ -1.87
APOEP02649 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
APOEP02649 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
APOEP02649 RNU6-317P-201ENST00000384031 107 ntBASIC3.36□□□□□ -1.87
APOEP02649 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
APOEP02649 RNA5SP229-201ENST00000410809 99 ntBASIC3.36□□□□□ -1.87
APOEP02649 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.36□□□□□ -1.87
APOEP02649 AL353678.1-201ENST00000422735 741 ntBASIC3.36□□□□□ -1.87
APOEP02649 AL031736.2-201ENST00000426573 787 ntBASIC3.36□□□□□ -1.87
APOEP02649 NDUFA5P10-201ENST00000432147 357 ntBASIC3.36□□□□□ -1.87
APOEP02649 B3GNT2P1-201ENST00000434960 952 ntBASIC3.36□□□□□ -1.87
APOEP02649 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.36□□□□□ -1.87
APOEP02649 VN1R48P-201ENST00000448149 1036 ntBASIC3.36□□□□□ -1.87
APOEP02649 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.36□□□□□ -1.87
APOEP02649 C1DP3-201ENST00000455013 423 ntBASIC3.36□□□□□ -1.87
APOEP02649 BX510359.1-201ENST00000456973 237 ntBASIC3.36□□□□□ -1.87
APOEP02649 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.36□□□□□ -1.87
APOEP02649 AC109925.1-201ENST00000478069 331 ntBASIC3.36□□□□□ -1.87
APOEP02649 AC114967.1-201ENST00000504890 259 ntBASIC3.36□□□□□ -1.87
APOEP02649 AC010285.3-201ENST00000511668 676 ntBASIC3.36□□□□□ -1.87
APOEP02649 RNA5SP385-201ENST00000515947 110 ntBASIC3.36□□□□□ -1.87
APOEP02649 RNU1-143P-201ENST00000516296 146 ntBASIC3.36□□□□□ -1.87
APOEP02649 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.36□□□□□ -1.87
APOEP02649 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
APOEP02649 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.36□□□□□ -1.87
APOEP02649 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC3.36□□□□□ -1.87
APOEP02649 AC010735.1-201ENST00000567305 1026 ntBASIC3.36□□□□□ -1.87
APOEP02649 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.36□□□□□ -1.87
APOEP02649 AC009303.3-201ENST00000591103 736 ntBASIC3.36□□□□□ -1.87
APOEP02649 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.36□□□□□ -1.87
APOEP02649 AC005021.1-201ENST00000608730 355 ntBASIC3.36□□□□□ -1.87
APOEP02649 AC090425.2-201ENST00000608818 501 ntBASIC3.36□□□□□ -1.87
APOEP02649 U1.23-201ENST00000610293 146 ntBASIC3.36□□□□□ -1.87
APOEP02649 RNU1-68P-201ENST00000615382 146 ntBASIC3.36□□□□□ -1.87
APOEP02649 U1.39-201ENST00000621562 146 ntBASIC3.36□□□□□ -1.87
APOEP02649 AC007256.1-201ENST00000392253 2765 ntBASIC3.36□□□□□ -1.87
APOEP02649 AC087565.3-202ENST00000642085 1603 ntBASIC3.36□□□□□ -1.87
APOEP02649 AC110774.1-201ENST00000623567 2018 ntBASIC3.36□□□□□ -1.87
APOEP02649 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
APOEP02649 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.35□□□□□ -1.87
APOEP02649 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
APOEP02649 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.35□□□□□ -1.87
APOEP02649 RNA5SP387-201ENST00000364226 106 ntBASIC3.35□□□□□ -1.87
APOEP02649 U3.11-201ENST00000364476 212 ntBASIC3.35□□□□□ -1.87
APOEP02649 OR52E6-202ENST00000379946 954 ntBASIC3.35□□□□□ -1.87
APOEP02649 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.35□□□□□ -1.87
APOEP02649 RNU4-47P-201ENST00000410876 114 ntBASIC3.35□□□□□ -1.87
APOEP02649 RNA5SP498-201ENST00000411342 120 ntBASIC3.35□□□□□ -1.87
APOEP02649 RPL7P46-201ENST00000425129 740 ntBASIC3.35□□□□□ -1.87
APOEP02649 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.35□□□□□ -1.87
APOEP02649 MTCO3P17-201ENST00000443775 513 ntBASIC3.35□□□□□ -1.87
APOEP02649 Z75741.1-201ENST00000446793 314 ntBASIC3.35□□□□□ -1.87
APOEP02649 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.35□□□□□ -1.87
APOEP02649 TPMTP4-201ENST00000450749 678 ntBASIC3.35□□□□□ -1.87
APOEP02649 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.35□□□□□ -1.87
APOEP02649 AC006483.1-201ENST00000487308 313 ntBASIC3.35□□□□□ -1.87
APOEP02649 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.35□□□□□ -1.87
APOEP02649 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.35□□□□□ -1.87
APOEP02649 AC021146.7-201ENST00000509604 775 ntBASIC3.35□□□□□ -1.87
APOEP02649 AC110792.2-201ENST00000510278 224 ntBASIC3.35□□□□□ -1.87
APOEP02649 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.35□□□□□ -1.87
APOEP02649 AC025857.1-201ENST00000525252 377 ntBASIC3.35□□□□□ -1.87
APOEP02649 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.35□□□□□ -1.87
APOEP02649 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.35□□□□□ -1.87
APOEP02649 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.35□□□□□ -1.87
APOEP02649 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.35□□□□□ -1.87
APOEP02649 MIR4506-201ENST00000584693 77 ntBASIC3.35□□□□□ -1.87
APOEP02649 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.35□□□□□ -1.87
APOEP02649 AC092184.1-201ENST00000625042 715 ntBASIC3.35□□□□□ -1.87
APOEP02649 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
APOEP02649 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
APOEP02649 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms