Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 MFSD8-233ENST00000641482 4860 ntBASIC2.63□□□□□ -1.99
SPTA1P02549 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
SPTA1P02549 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SPTA1P02549 MIR337-201ENST00000362281 93 ntBASIC2.62□□□□□ -1.99
SPTA1P02549 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SPTA1P02549 SNORA3.2-201ENST00000408221 125 ntBASIC2.62□□□□□ -1.99
SPTA1P02549 ETF1P3-201ENST00000430422 1160 ntBASIC2.62□□□□□ -1.99
SPTA1P02549 AL591623.2-201ENST00000449978 222 ntBASIC2.62□□□□□ -1.99
SPTA1P02549 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC2.62□□□□□ -1.99
SPTA1P02549 AC005921.1-201ENST00000510589 286 ntBASIC2.62□□□□□ -1.99
SPTA1P02549 AP000859.1-201ENST00000525536 307 ntBASIC2.62□□□□□ -1.99
SPTA1P02549 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC2.62□□□□□ -1.99
SPTA1P02549 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.62□□□□□ -1.99
SPTA1P02549 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC2.62□□□□□ -1.99
SPTA1P02549 DPRXP4-201ENST00000578053 568 ntBASIC2.62□□□□□ -1.99
SPTA1P02549 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.62□□□□□ -1.99
SPTA1P02549 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
SPTA1P02549 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SPTA1P02549 STK31-205ENST00000433467 3085 ntTSL 2 BASIC2.62□□□□□ -1.99
SPTA1P02549 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC2.62□□□□□ -1.99
SPTA1P02549 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
SPTA1P02549 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SPTA1P02549 RNU6-618P-201ENST00000363518 112 ntBASIC2.62□□□□□ -1.99
SPTA1P02549 Y_RNA.595-201ENST00000410403 105 ntBASIC2.62□□□□□ -1.99
SPTA1P02549 AL137014.1-201ENST00000420490 1226 ntBASIC2.62□□□□□ -1.99
SPTA1P02549 DUTP6-201ENST00000425573 462 ntBASIC2.62□□□□□ -1.99
SPTA1P02549 AC011242.1-201ENST00000433596 1158 ntBASIC2.62□□□□□ -1.99
SPTA1P02549 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.62□□□□□ -1.99
SPTA1P02549 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SPTA1P02549 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.62□□□□□ -1.99
SPTA1P02549 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SPTA1P02549 AC107027.3-201ENST00000565095 3473 ntBASIC2.61□□□□□ -1.99
SPTA1P02549 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
SPTA1P02549 RPL21P132-201ENST00000331267 462 ntBASIC2.61□□□□□ -1.99
SPTA1P02549 Y_RNA.140-201ENST00000363474 103 ntBASIC2.61□□□□□ -1.99
SPTA1P02549 MIR499A-201ENST00000384903 122 ntBASIC2.61□□□□□ -1.99
SPTA1P02549 RNA5SP39-201ENST00000411245 120 ntBASIC2.61□□□□□ -1.99
SPTA1P02549 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC2.61□□□□□ -1.99
SPTA1P02549 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.61□□□□□ -1.99
SPTA1P02549 AC010469.1-201ENST00000463864 576 ntBASIC2.61□□□□□ -1.99
SPTA1P02549 AC021205.2-201ENST00000480069 347 ntBASIC2.61□□□□□ -1.99
SPTA1P02549 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC2.61□□□□□ -1.99
SPTA1P02549 MIR1273D-201ENST00000577266 86 ntBASIC2.61□□□□□ -1.99
SPTA1P02549 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.61□□□□□ -1.99
SPTA1P02549 AC007566.2-201ENST00000603642 413 ntBASIC2.61□□□□□ -1.99
SPTA1P02549 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
SPTA1P02549 RNA5SP289-201ENST00000362332 137 ntBASIC2.61□□□□□ -1.99
SPTA1P02549 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC2.61□□□□□ -1.99
SPTA1P02549 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.61□□□□□ -1.99
SPTA1P02549 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC2.61□□□□□ -1.99
SPTA1P02549 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC2.61□□□□□ -1.99
SPTA1P02549 SYT14P1-201ENST00000481459 721 ntBASIC2.61□□□□□ -1.99
SPTA1P02549 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.61□□□□□ -1.99
SPTA1P02549 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC2.61□□□□□ -1.99
SPTA1P02549 AP000867.2-201ENST00000532468 320 ntBASIC2.61□□□□□ -1.99
SPTA1P02549 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.61□□□□□ -1.99
SPTA1P02549 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
SPTA1P02549 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SPTA1P02549 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SPTA1P02549 RNU6-1159P-201ENST00000362933 107 ntBASIC2.6□□□□□ -1.99
SPTA1P02549 AP002088.1-201ENST00000382740 395 ntBASIC2.6□□□□□ -1.99
SPTA1P02549 AL139039.1-201ENST00000401900 692 ntBASIC2.6□□□□□ -1.99
SPTA1P02549 RPL7P25-201ENST00000404151 721 ntBASIC2.6□□□□□ -1.99
SPTA1P02549 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SPTA1P02549 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.6□□□□□ -1.99
SPTA1P02549 AC002075.2-201ENST00000425207 252 ntBASIC2.6□□□□□ -1.99
SPTA1P02549 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC2.6□□□□□ -1.99
SPTA1P02549 FAM103A2P-201ENST00000444122 354 ntBASIC2.6□□□□□ -1.99
SPTA1P02549 AC099560.2-201ENST00000457554 255 ntBASIC2.6□□□□□ -1.99
SPTA1P02549 RPL23AP11-201ENST00000475260 469 ntBASIC2.6□□□□□ -1.99
SPTA1P02549 AC116337.1-201ENST00000509680 687 ntBASIC2.6□□□□□ -1.99
SPTA1P02549 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.6□□□□□ -1.99
SPTA1P02549 RNA5SP154-201ENST00000516193 111 ntBASIC2.6□□□□□ -1.99
SPTA1P02549 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.6□□□□□ -1.99
SPTA1P02549 AC096947.1-201ENST00000603233 470 ntBASIC2.6□□□□□ -1.99
SPTA1P02549 AC009237.17-201ENST00000618111 748 ntBASIC2.6□□□□□ -1.99
SPTA1P02549 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC2.6□□□□□ -1.99
SPTA1P02549 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
SPTA1P02549 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SPTA1P02549 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
SPTA1P02549 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.6□□□□□ -1.99
SPTA1P02549 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.6□□□□□ -1.99
SPTA1P02549 MIR592-201ENST00000384959 97 ntBASIC2.6□□□□□ -1.99
SPTA1P02549 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC2.6□□□□□ -1.99
SPTA1P02549 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.6□□□□□ -1.99
SPTA1P02549 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC2.6□□□□□ -1.99
SPTA1P02549 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
SPTA1P02549 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC2.6□□□□□ -1.99
SPTA1P02549 IGKV2-36-201ENST00000519999 223 ntBASIC2.6□□□□□ -1.99
SPTA1P02549 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.6□□□□□ -1.99
SPTA1P02549 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.6□□□□□ -1.99
SPTA1P02549 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.6□□□□□ -1.99
SPTA1P02549 AC009977.1-201ENST00000586015 570 ntBASIC2.6□□□□□ -1.99
SPTA1P02549 NTAN1P1-201ENST00000603150 646 ntBASIC2.6□□□□□ -1.99
SPTA1P02549 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SPTA1P02549 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
SPTA1P02549 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SPTA1P02549 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
SPTA1P02549 MTND4P26-201ENST00000415971 1359 ntBASIC2.59□□□□□ -1.99
SPTA1P02549 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms