Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
COL3A1P02461 AP000916.1-201ENST00000533869 835 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.94□□□□□ -1.62
COL3A1P02461 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.94□□□□□ -1.62
COL3A1P02461 AL512347.1-201ENST00000566420 503 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 CBX3P2-202ENST00000583365 535 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.94□□□□□ -1.62
COL3A1P02461 AC079089.3-201ENST00000603094 673 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 AL136363.2-201ENST00000604173 851 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 AC233309.1-201ENST00000619522 751 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 AC091953.5-201ENST00000622919 233 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 AL356596.1-201ENST00000624230 379 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 AC091905.1-201ENST00000624400 311 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.94□□□□□ -1.62
COL3A1P02461 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
COL3A1P02461 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL3A1P02461 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.93□□□□□ -1.62
COL3A1P02461 AP001284.1-201ENST00000528393 2118 ntBASIC4.93□□□□□ -1.62
COL3A1P02461 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
COL3A1P02461 AC139713.2-215ENST00000641428 5037 ntBASIC4.93□□□□□ -1.62
COL3A1P02461 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
COL3A1P02461 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.93□□□□□ -1.62
COL3A1P02461 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
COL3A1P02461 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL3A1P02461 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL3A1P02461 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL3A1P02461 RNU6-224P-201ENST00000384055 107 ntBASIC4.93□□□□□ -1.62
COL3A1P02461 RNY3P14-201ENST00000384309 102 ntBASIC4.93□□□□□ -1.62
COL3A1P02461 Y_RNA.472-201ENST00000384322 102 ntBASIC4.93□□□□□ -1.62
COL3A1P02461 AC017079.2-201ENST00000416102 485 ntBASIC4.93□□□□□ -1.62
COL3A1P02461 AC246680.2-201ENST00000422106 389 ntBASIC4.93□□□□□ -1.62
COL3A1P02461 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.93□□□□□ -1.62
COL3A1P02461 OR5AW1P-201ENST00000426334 1006 ntBASIC4.93□□□□□ -1.62
COL3A1P02461 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.93□□□□□ -1.62
COL3A1P02461 AC244035.1-201ENST00000430042 390 ntBASIC4.93□□□□□ -1.62
COL3A1P02461 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.93□□□□□ -1.62
COL3A1P02461 NANOGP2-201ENST00000435391 727 ntBASIC4.93□□□□□ -1.62
COL3A1P02461 AC000041.1-201ENST00000439655 175 ntBASIC4.93□□□□□ -1.62
COL3A1P02461 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.93□□□□□ -1.62
COL3A1P02461 TRBV8-1-201ENST00000481590 279 ntBASIC4.93□□□□□ -1.62
COL3A1P02461 AC068724.1-201ENST00000487100 792 ntBASIC4.93□□□□□ -1.62
COL3A1P02461 UBA52P3-201ENST00000491303 382 ntBASIC4.93□□□□□ -1.62
COL3A1P02461 CDH12P2-201ENST00000504393 298 ntBASIC4.93□□□□□ -1.62
COL3A1P02461 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL3A1P02461 AC008885.2-201ENST00000509506 930 ntBASIC4.93□□□□□ -1.62
COL3A1P02461 RNU6-964P-201ENST00000516524 69 ntBASIC4.93□□□□□ -1.62
COL3A1P02461 NPM1P52-201ENST00000518264 846 ntBASIC4.93□□□□□ -1.62
COL3A1P02461 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.93□□□□□ -1.62
COL3A1P02461 AC087897.1-201ENST00000550134 156 ntBASIC4.93□□□□□ -1.62
COL3A1P02461 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC4.93□□□□□ -1.62
COL3A1P02461 AC136619.2-201ENST00000563361 631 ntBASIC4.93□□□□□ -1.62
COL3A1P02461 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.93□□□□□ -1.62
COL3A1P02461 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.93□□□□□ -1.62
COL3A1P02461 RSL24D1P11-201ENST00000591045 491 ntBASIC4.93□□□□□ -1.62
COL3A1P02461 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.93□□□□□ -1.62
COL3A1P02461 AC106791.2-201ENST00000604680 391 ntBASIC4.93□□□□□ -1.62
COL3A1P02461 AL391497.1-201ENST00000608671 547 ntBASIC4.93□□□□□ -1.62
COL3A1P02461 AC025253.1-201ENST00000613623 543 ntBASIC4.93□□□□□ -1.62
COL3A1P02461 AC132825.8-201ENST00000640783 297 ntBASIC4.93□□□□□ -1.62
COL3A1P02461 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.93□□□□□ -1.62
COL3A1P02461 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL3A1P02461 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
COL3A1P02461 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
COL3A1P02461 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL3A1P02461 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
COL3A1P02461 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.92□□□□□ -1.62
COL3A1P02461 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.92□□□□□ -1.62
COL3A1P02461 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.92□□□□□ -1.62
COL3A1P02461 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.92□□□□□ -1.62
COL3A1P02461 SDCBPP2-201ENST00000424643 885 ntBASIC4.92□□□□□ -1.62
COL3A1P02461 MOB1AP1-201ENST00000430903 535 ntBASIC4.92□□□□□ -1.62
COL3A1P02461 AC092809.1-201ENST00000441469 474 ntBASIC4.92□□□□□ -1.62
COL3A1P02461 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.92□□□□□ -1.62
COL3A1P02461 AC027673.1-201ENST00000456245 405 ntBASIC4.92□□□□□ -1.62
COL3A1P02461 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.92□□□□□ -1.62
COL3A1P02461 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.92□□□□□ -1.62
COL3A1P02461 PDCL2P2-201ENST00000533651 189 ntBASIC4.92□□□□□ -1.62
COL3A1P02461 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.92□□□□□ -1.62
COL3A1P02461 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.92□□□□□ -1.62
COL3A1P02461 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.92□□□□□ -1.62
COL3A1P02461 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.92□□□□□ -1.62
COL3A1P02461 AC027104.1-201ENST00000563702 681 ntBASIC4.92□□□□□ -1.62
COL3A1P02461 AL133457.1-201ENST00000564251 987 ntBASIC4.92□□□□□ -1.62
COL3A1P02461 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.92□□□□□ -1.62
COL3A1P02461 AC074051.3-201ENST00000570238 358 ntBASIC4.92□□□□□ -1.62
COL3A1P02461 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.92□□□□□ -1.62
COL3A1P02461 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.92□□□□□ -1.62
COL3A1P02461 MIR3922-201ENST00000585192 84 ntBASIC4.92□□□□□ -1.62
COL3A1P02461 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.92□□□□□ -1.62
COL3A1P02461 AC073544.2-201ENST00000601155 540 ntBASIC4.92□□□□□ -1.62
COL3A1P02461 AL606834.2-201ENST00000602954 668 ntBASIC4.92□□□□□ -1.62
COL3A1P02461 AP003392.5-201ENST00000607857 415 ntBASIC4.92□□□□□ -1.62
COL3A1P02461 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.92□□□□□ -1.62
COL3A1P02461 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.92□□□□□ -1.62
COL3A1P02461 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.92□□□□□ -1.62
COL3A1P02461 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL3A1P02461 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL3A1P02461 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL3A1P02461 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.91□□□□□ -1.62
COL3A1P02461 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms